Gene annotation
Transcriptome id Sobic.010G243900.3,Sobic.010G243900.1,Sobic.010G243900.2
Synonym ZTL, ADO1, LKP1, Sb10g028340, FKL2
Functional annotation OsFBO9 - F-box and other domain containing protein, expressed
UniProt C5Z8R1 , A0A1W0VUN3 , A0A1W0VUM6
Pfam PF12937 PF13426 PF07646 PF13415 PF13418 PF12937 PF07646 PF13415 PF13418
Panther DB PTHR23244 PTHR23244:SF290
NCBI CDD KOG4693; Uncharacterized conserved protein, contains kelch repeat
KEGG Orthology K12115; clock-associated PAS protein ZTL
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G57360 : Galactose oxidase/kelch repeat superfamily protein
RAP-DB (Rice) LOC_Os06g47890.2 : OsFBO9 - F-box and other domain containing protein, expressed
MaizeGDB (Corn) Zm00025a041819 , Zm00025a013191 , Zm00025a019004 , Zm00025a018271
Brachypodium KQK17308 , KQJ93353 , KQJ93356 , KQJ93357 , KQJ93355
Barley HORVU7Hr1G099010.2 , HORVU6Hr1G022330.2 , HORVU6Hr1G022330.3 , HORVU7Hr1G099010.1 , HORVU7Hr1G099010.3 , HORVU7Hr1G099010.4 , HORVU7Hr1G099010.5 , HORVU6Hr1G022330.1
Wheat TraesCS6A02G121500 , TraesCS7A02G431600 , TraesCS6B02G149800 , TraesCS6D02G111600 , TraesCS7D02G423400 , TraesCS6B02G426300
Populus -


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cDNA sequences
Sobic.010G243900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G046200 - -
2 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
3 Sobic.010G149200 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
4 Sobic.001G161800 F-box/LRR domain containing protein, putative, expressed -
5 Sobic.003G398700 expressed protein K15210: snRNA-activating protein complex subunit 3
6 Sobic.008G113100 protein binding protein, putative, expressed -
7 Sobic.010G021500 WD domain, G-beta repeat domain containing protein, expressed -
8 Sobic.002G029900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.002G042800 expressed protein -
10 Sobic.009G024000 nuclear factor related to kappa-B-binding protein, related, putative, expressed K11671: NFRKB, nuclear factor related to kappa-B-binding protein
11 Sobic.007G136800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
12 Sobic.006G145200 expressed protein -
13 Sobic.001G456900 expressed protein -
14 Sobic.002G408200 sec8 exocyst complex component specific domain containing protein, expressed K06111: EXOC4, exocyst complex component 4
15 Sobic.004G164400 expressed protein -
16 Sobic.004G034800 OsFBX440 - F-box domain containing protein, expressed -
17 Sobic.001G198100 PAP fibrillin family domain containing protein, expressed -
18 Sobic.006G216100 expressed protein -
19 Sobic.008G044100 expressed protein -
20 Sobic.004G258700 PHD-finger family protein, expressed -


Gene co-expression network
sample Sobic010G243900 Sobic010G243900 Sobic001G046200 Sobic001G046200 Sobic010G243900--Sobic001G046200 Sobic004G042200 Sobic004G042200 Sobic010G243900--Sobic004G042200 Sobic010G149200 Sobic010G149200 Sobic010G243900--Sobic010G149200 Sobic001G161800 Sobic001G161800 Sobic010G243900--Sobic001G161800 Sobic003G398700 Sobic003G398700 Sobic010G243900--Sobic003G398700 Sobic008G113100 Sobic008G113100 Sobic010G243900--Sobic008G113100 Sobic010G021500 Sobic010G021500 Sobic010G243900--Sobic010G021500 Sobic002G029900 Sobic002G029900 Sobic010G243900--Sobic002G029900 Sobic002G042800 Sobic002G042800 Sobic010G243900--Sobic002G042800 Sobic001G046200--Sobic010G243900 Sobic003G148000 Sobic003G148000 Sobic001G046200--Sobic003G148000 Sobic002G408200 Sobic002G408200 Sobic001G046200--Sobic002G408200 Sobic006G098800 Sobic006G098800 Sobic001G046200--Sobic006G098800 Sobic001G046200--Sobic001G161800 Sobic001G046200--Sobic002G042800 Sobic003G429650 Sobic003G429650 Sobic001G046200--Sobic003G429650 Sobic004G034800 Sobic004G034800 Sobic001G046200--Sobic004G034800 Sobic006G219150 Sobic006G219150 Sobic001G046200--Sobic006G219150 Sobic009G038900 Sobic009G038900 Sobic004G042200--Sobic009G038900 Sobic010G002700 Sobic010G002700 Sobic004G042200--Sobic010G002700 Sobic003G191700 Sobic003G191700 Sobic004G042200--Sobic003G191700 Sobic006G050700 Sobic006G050700 Sobic004G042200--Sobic006G050700 Sobic003G220100 Sobic003G220100 Sobic004G042200--Sobic003G220100 Sobic003G155100 Sobic003G155100 Sobic004G042200--Sobic003G155100 Sobic004G042200--Sobic010G243900 Sobic005G106600 Sobic005G106600 Sobic004G042200--Sobic005G106600 Sobic006G133900 Sobic006G133900 Sobic004G042200--Sobic006G133900 Sobic006G145200 Sobic006G145200 Sobic010G149200--Sobic006G145200 Sobic010G149200--Sobic010G243900 Sobic010G149200--Sobic010G021500 Sobic001G126100 Sobic001G126100 Sobic010G149200--Sobic001G126100 Sobic004G164400 Sobic004G164400 Sobic010G149200--Sobic004G164400 Sobic003G340600 Sobic003G340600 Sobic010G149200--Sobic003G340600 Sobic010G149200--Sobic004G042200 Sobic010G143800 Sobic010G143800 Sobic010G149200--Sobic010G143800 Sobic003G221900 Sobic003G221900 Sobic010G149200--Sobic003G221900 Sobic001G161800--Sobic002G408200 Sobic010G279450 Sobic010G279450 Sobic001G161800--Sobic010G279450 Sobic001G161800--Sobic010G243900 Sobic003G052200 Sobic003G052200 Sobic001G161800--Sobic003G052200 Sobic008G028700 Sobic008G028700 Sobic001G161800--Sobic008G028700 Sobic009G024000 Sobic009G024000 Sobic001G161800--Sobic009G024000 Sobic002G405800 Sobic002G405800 Sobic001G161800--Sobic002G405800 Sobic004G258700 Sobic004G258700 Sobic001G161800--Sobic004G258700 Sobic001G161800--Sobic008G113100 Sobic002G257750 Sobic002G257750 Sobic003G398700--Sobic002G257750 Sobic001G456900 Sobic001G456900 Sobic003G398700--Sobic001G456900 Sobic008G044100 Sobic008G044100 Sobic003G398700--Sobic008G044100 Sobic003G398700--Sobic010G021500 Sobic007G136800 Sobic007G136800 Sobic003G398700--Sobic007G136800 Sobic004G185800 Sobic004G185800 Sobic003G398700--Sobic004G185800 Sobic003G168100 Sobic003G168100 Sobic003G398700--Sobic003G168100 Sobic003G398700--Sobic008G113100 Sobic010G126000 Sobic010G126000 Sobic003G398700--Sobic010G126000 Sobic008G113100--Sobic004G258700 Sobic008G113100--Sobic008G028700 Sobic005G064000 Sobic005G064000 Sobic008G113100--Sobic005G064000 Sobic007G065400 Sobic007G065400 Sobic008G113100--Sobic007G065400 Sobic008G113100--Sobic001G456900 Sobic008G113100--Sobic009G024000 Sobic009G040600 Sobic009G040600 Sobic008G113100--Sobic009G040600 Sobic004G208900 Sobic004G208900 Sobic008G113100--Sobic004G208900 Sobic004G039200 Sobic004G039200 Sobic008G113100--Sobic004G039200 Sobic010G021500--Sobic003G398700 Sobic010G167900 Sobic010G167900 Sobic010G021500--Sobic010G167900 Sobic010G021500--Sobic008G113100 Sobic006G096900 Sobic006G096900 Sobic010G021500--Sobic006G096900 Sobic010G021500--Sobic001G456900 Sobic010G021500--Sobic010G149200 Sobic005G027400 Sobic005G027400 Sobic010G021500--Sobic005G027400 Sobic005G100700 Sobic005G100700 Sobic010G021500--Sobic005G100700 Sobic010G021500--Sobic003G221900 Sobic002G029900--Sobic008G044100 Sobic001G374100 Sobic001G374100 Sobic002G029900--Sobic001G374100 Sobic002G029900--Sobic010G243900 Sobic004G209600 Sobic004G209600 Sobic002G029900--Sobic004G209600 Sobic002G029900--Sobic001G456900 Sobic002G029900--Sobic003G168100 Sobic002G127550 Sobic002G127550 Sobic002G029900--Sobic002G127550 Sobic004G244900 Sobic004G244900 Sobic002G029900--Sobic004G244900 Sobic007G161000 Sobic007G161000 Sobic002G029900--Sobic007G161000 Sobic002G042800--Sobic008G028700 Sobic002G042800--Sobic001G456900 Sobic006G216100 Sobic006G216100 Sobic002G042800--Sobic006G216100 Sobic002G042800--Sobic002G408200 Sobic001G094600 Sobic001G094600 Sobic002G042800--Sobic001G094600 Sobic002G042800--Sobic010G243900 Sobic002G042800--Sobic010G279450 Sobic002G042800--Sobic008G113100 Sobic002G103600 Sobic002G103600 Sobic002G042800--Sobic002G103600
Octagon: transcription factors


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