Gene annotation
Transcriptome id Sobic.002G029900.1
Synonym AtMYB4R1, MYB4R1
Functional annotation MYB family transcription factor, putative, expressed
UniProt A0A1B6Q8X6
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF538
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G18100 : myb domain protein 4r1
RAP-DB (Rice) LOC_Os07g04700.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a044985
Brachypodium -
Barley HORVU5Hr1G077100.4 , HORVU5Hr1G077100.5 , HORVU5Hr1G077100.6 , HORVU5Hr1G077100.7 , HORVU5Hr1G077100.1 , HORVU5Hr1G077100.2 , HORVU5Hr1G077100.3 , HORVU5Hr1G077100.8
Wheat TraesCS3A02G503500 , TraesCS5D02G298900 , TraesCS5D02G298900 , TraesCS5D02G298900 , TraesCS5B02G290500 , TraesCS5B02G290500 , TraesCS5B02G290500 , TraesCS5A02G291400
Populus -


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cDNA sequences
Sobic.002G029900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G044100 expressed protein -
2 Sobic.001G374100 jmjC domain containing protein, expressed K15601: [histone H3]-dimethyl-L-lysine9 demethylase
3 Sobic.010G243900 OsFBO9 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
4 Sobic.004G209600 SWIM zinc finger family protein, putative, expressed -
5 Sobic.001G456900 expressed protein -
6 Sobic.003G168100 BZIP protein, putative, expressed -
7 Sobic.002G127550 - -
8 Sobic.004G244900 expressed protein -
9 Sobic.007G161000 RecF/RecN/SMC N terminal domain containing protein, expressed K06636: structural maintenance of chromosome 1
10 Sobic.010G126000 WD-40 repeat family protein, putative, expressed -
11 Sobic.010G010700 PHD-finger family protein, expressed -
12 Sobic.006G216100 expressed protein -
13 Sobic.007G116200 expressed protein K13217: PRPF39, pre-mRNA-processing factor 39
14 Sobic.006G252900 ubiquitin family protein, putative, expressed -
15 Sobic.004G314000 expressed protein -
16 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
17 Sobic.006G182900 expressed protein -
18 Sobic.004G034800 OsFBX440 - F-box domain containing protein, expressed -
19 Sobic.009G215500 transcription initiation factor IIB, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
20 Sobic.004G178500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor 7, putative, expressed K14486: K14486, auxin response factor


Gene co-expression network
sample Sobic002G029900 Sobic002G029900 Sobic008G044100 Sobic008G044100 Sobic002G029900--Sobic008G044100 Sobic001G374100 Sobic001G374100 Sobic002G029900--Sobic001G374100 Sobic010G243900 Sobic010G243900 Sobic002G029900--Sobic010G243900 Sobic004G209600 Sobic004G209600 Sobic002G029900--Sobic004G209600 Sobic001G456900 Sobic001G456900 Sobic002G029900--Sobic001G456900 Sobic003G168100 Sobic003G168100 Sobic002G029900--Sobic003G168100 Sobic002G127550 Sobic002G127550 Sobic002G029900--Sobic002G127550 Sobic004G244900 Sobic004G244900 Sobic002G029900--Sobic004G244900 Sobic007G161000 Sobic007G161000 Sobic002G029900--Sobic007G161000 Sobic010G010700 Sobic010G010700 Sobic008G044100--Sobic010G010700 Sobic004G134200 Sobic004G134200 Sobic008G044100--Sobic004G134200 Sobic008G044100--Sobic001G374100 Sobic003G155100 Sobic003G155100 Sobic008G044100--Sobic003G155100 Sobic010G206900 Sobic010G206900 Sobic008G044100--Sobic010G206900 Sobic001G230000 Sobic001G230000 Sobic008G044100--Sobic001G230000 Sobic008G001200 Sobic008G001200 Sobic008G044100--Sobic008G001200 Sobic003G389200 Sobic003G389200 Sobic008G044100--Sobic003G389200 Sobic002G316600 Sobic002G316600 Sobic008G044100--Sobic002G316600 Sobic001G374100--Sobic008G044100 Sobic001G374100--Sobic004G134200 Sobic001G374100--Sobic010G010700 Sobic001G374100--Sobic003G155100 Sobic006G252900 Sobic006G252900 Sobic001G374100--Sobic006G252900 Sobic003G011300 Sobic003G011300 Sobic001G374100--Sobic003G011300 Sobic001G374100--Sobic008G001200 Sobic006G259800 Sobic006G259800 Sobic001G374100--Sobic006G259800 Sobic001G374100--Sobic001G456900 Sobic001G046200 Sobic001G046200 Sobic010G243900--Sobic001G046200 Sobic004G042200 Sobic004G042200 Sobic010G243900--Sobic004G042200 Sobic010G149200 Sobic010G149200 Sobic010G243900--Sobic010G149200 Sobic001G161800 Sobic001G161800 Sobic010G243900--Sobic001G161800 Sobic003G398700 Sobic003G398700 Sobic010G243900--Sobic003G398700 Sobic008G113100 Sobic008G113100 Sobic010G243900--Sobic008G113100 Sobic010G021500 Sobic010G021500 Sobic010G243900--Sobic010G021500 Sobic010G243900--Sobic002G029900 Sobic002G042800 Sobic002G042800 Sobic010G243900--Sobic002G042800 Sobic010G139000 Sobic010G139000 Sobic004G209600--Sobic010G139000 Sobic004G314000 Sobic004G314000 Sobic004G209600--Sobic004G314000 Sobic004G209600--Sobic010G010700 Sobic007G117400 Sobic007G117400 Sobic004G209600--Sobic007G117400 Sobic005G008800 Sobic005G008800 Sobic004G209600--Sobic005G008800 Sobic002G134200 Sobic002G134200 Sobic004G209600--Sobic002G134200 Sobic005G112300 Sobic005G112300 Sobic004G209600--Sobic005G112300 Sobic004G242400 Sobic004G242400 Sobic004G209600--Sobic004G242400 Sobic003G280800 Sobic003G280800 Sobic004G209600--Sobic003G280800 Sobic001G036050 Sobic001G036050 Sobic001G456900--Sobic001G036050 Sobic001G456900--Sobic010G139000 Sobic004G258700 Sobic004G258700 Sobic001G456900--Sobic004G258700 Sobic001G456900--Sobic008G113100 Sobic008G028700 Sobic008G028700 Sobic001G456900--Sobic008G028700 Sobic002G180666 Sobic002G180666 Sobic001G456900--Sobic002G180666 Sobic001G311500 Sobic001G311500 Sobic001G456900--Sobic001G311500 Sobic001G456900--Sobic003G398700 Sobic003G101500 Sobic003G101500 Sobic001G456900--Sobic003G101500 Sobic010G126000 Sobic010G126000 Sobic003G168100--Sobic010G126000 Sobic005G167700 Sobic005G167700 Sobic003G168100--Sobic005G167700 Sobic009G129100 Sobic009G129100 Sobic003G168100--Sobic009G129100 Sobic003G168100--Sobic008G044100 Sobic001G433800 Sobic001G433800 Sobic003G168100--Sobic001G433800 Sobic003G168100--Sobic003G398700 Sobic003G168100--Sobic004G244900 Sobic003G168100--Sobic004G134200 Sobic004G185800 Sobic004G185800 Sobic003G168100--Sobic004G185800 Sobic003G138500 Sobic003G138500 Sobic002G127550--Sobic003G138500 Sobic002G127550--Sobic010G126000 Sobic002G127550--Sobic008G044100 Sobic004G034800 Sobic004G034800 Sobic002G127550--Sobic004G034800 Sobic001G194200 Sobic001G194200 Sobic002G127550--Sobic001G194200 Sobic002G127550--Sobic008G001200 Sobic002G127550--Sobic010G010700 Sobic004G291900 Sobic004G291900 Sobic002G127550--Sobic004G291900 Sobic002G127550--Sobic004G209600 Sobic001G457800 Sobic001G457800 Sobic004G244900--Sobic001G457800 Sobic004G334300 Sobic004G334300 Sobic004G244900--Sobic004G334300 Sobic003G119600 Sobic003G119600 Sobic004G244900--Sobic003G119600 Sobic004G244900--Sobic003G155100 Sobic004G244900--Sobic008G001200 Sobic004G356700 Sobic004G356700 Sobic004G244900--Sobic004G356700 Sobic009G201300 Sobic009G201300 Sobic004G244900--Sobic009G201300 Sobic002G275700 Sobic002G275700 Sobic004G244900--Sobic002G275700 Sobic004G244900--Sobic003G168100 Sobic004G039200 Sobic004G039200 Sobic007G161000--Sobic004G039200 Sobic007G161000--Sobic007G117400 Sobic009G024000 Sobic009G024000 Sobic007G161000--Sobic009G024000 Sobic007G161000--Sobic010G139000 Sobic006G182900 Sobic006G182900 Sobic007G161000--Sobic006G182900 Sobic002G309600 Sobic002G309600 Sobic007G161000--Sobic002G309600 Sobic007G161000--Sobic004G314000 Sobic007G161000--Sobic002G134200 Sobic007G161000--Sobic008G028700
Octagon: transcription factors


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