Gene annotation
Transcriptome id Sobic.002G127550.1
Synonym -
Functional annotation -
UniProt A0A1W0W3J9
Pfam PF07287
Panther DB PTHR13943 PTHR13943:SF48
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G01770 : -
RAP-DB (Rice) LOC_Os07g27350.1 : atuA, putative, expressed
MaizeGDB (Corn) Zm00025a045862
Brachypodium KQK16406 , KQK16407
Barley HORVU7Hr1G078870.30 , HORVU7Hr1G078870.28 , HORVU7Hr1G078870.29 , HORVU7Hr1G078870.22 , HORVU7Hr1G078870.23 , HORVU7Hr1G078870.20 , HORVU7Hr1G078870.21 , HORVU7Hr1G078870.27 , HORVU7Hr1G078870.24 , HORVU7Hr1G078870.25 , HORVU7Hr1G078870.3 , HORVU7Hr1G078870.2 , HORVU7Hr1G078870.1 , HORVU7Hr1G078870.7 , HORVU7Hr1G078870.6 , HORVU7Hr1G078870.5 , HORVU7Hr1G078870.4 , HORVU7Hr1G078870.9 , HORVU7Hr1G078870.8 , HORVU7Hr1G078870.26 , HORVU7Hr1G078870.13 , HORVU7Hr1G078870.12 , HORVU7Hr1G078870.11 , HORVU7Hr1G078870.10 , HORVU7Hr1G078870.17 , HORVU7Hr1G078870.16 , HORVU7Hr1G078870.15 , HORVU7Hr1G078870.14 , HORVU7Hr1G078870.19 , HORVU7Hr1G078870.18
Wheat TraesCS7B02G230500 , TraesCS7B02G230500 , TraesCS7D02G326700 , TraesCS7D02G326700 , TraesCS7D02G326700 , TraesCS7D02G326700 , TraesCS7D02G326700 , TraesCS7D02G326700 , TraesCS7D02G326700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G138500 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
2 Sobic.010G126000 WD-40 repeat family protein, putative, expressed -
3 Sobic.008G044100 expressed protein -
4 Sobic.004G034800 OsFBX440 - F-box domain containing protein, expressed -
5 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
6 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
7 Sobic.010G010700 PHD-finger family protein, expressed -
8 Sobic.004G291900 ESP4, putative, expressed K06100: symplekin
9 Sobic.004G209600 SWIM zinc finger family protein, putative, expressed -
10 Sobic.010G139000 surp module family protein, putative, expressed K13123: G patch domain-containing protein 1
11 Sobic.007G116200 expressed protein K13217: PRPF39, pre-mRNA-processing factor 39
12 Sobic.004G244900 expressed protein -
13 Sobic.009G215500 transcription initiation factor IIB, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
14 Sobic.002G029900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.004G314000 expressed protein -
16 Sobic.002G316600 expressed protein -
17 Sobic.003G067100 aspartyl-tRNA synthetase, putative, expressed K01876: aspartyl-tRNA synthetase
18 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
19 Sobic.004G359800 inositol-1-monophosphatase, putative, expressed -
20 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1


Gene co-expression network
sample Sobic002G127550 Sobic002G127550 Sobic003G138500 Sobic003G138500 Sobic002G127550--Sobic003G138500 Sobic010G126000 Sobic010G126000 Sobic002G127550--Sobic010G126000 Sobic008G044100 Sobic008G044100 Sobic002G127550--Sobic008G044100 Sobic004G034800 Sobic004G034800 Sobic002G127550--Sobic004G034800 Sobic001G194200 Sobic001G194200 Sobic002G127550--Sobic001G194200 Sobic008G001200 Sobic008G001200 Sobic002G127550--Sobic008G001200 Sobic010G010700 Sobic010G010700 Sobic002G127550--Sobic010G010700 Sobic004G291900 Sobic004G291900 Sobic002G127550--Sobic004G291900 Sobic004G209600 Sobic004G209600 Sobic002G127550--Sobic004G209600 Sobic003G138500--Sobic002G127550 Sobic001G159400 Sobic001G159400 Sobic003G138500--Sobic001G159400 Sobic003G138500--Sobic004G034800 Sobic004G359800 Sobic004G359800 Sobic003G138500--Sobic004G359800 Sobic010G176550 Sobic010G176550 Sobic003G138500--Sobic010G176550 Sobic007G116200 Sobic007G116200 Sobic003G138500--Sobic007G116200 Sobic002G276100 Sobic002G276100 Sobic003G138500--Sobic002G276100 Sobic003G381200 Sobic003G381200 Sobic003G138500--Sobic003G381200 Sobic001G186800 Sobic001G186800 Sobic003G138500--Sobic001G186800 Sobic003G168100 Sobic003G168100 Sobic010G126000--Sobic003G168100 Sobic010G126000--Sobic008G044100 Sobic010G126000--Sobic002G127550 Sobic005G167700 Sobic005G167700 Sobic010G126000--Sobic005G167700 Sobic001G227200 Sobic001G227200 Sobic010G126000--Sobic001G227200 Sobic006G096900 Sobic006G096900 Sobic010G126000--Sobic006G096900 Sobic003G398700 Sobic003G398700 Sobic010G126000--Sobic003G398700 Sobic001G219600 Sobic001G219600 Sobic010G126000--Sobic001G219600 Sobic007G136800 Sobic007G136800 Sobic010G126000--Sobic007G136800 Sobic008G044100--Sobic010G010700 Sobic004G134200 Sobic004G134200 Sobic008G044100--Sobic004G134200 Sobic001G374100 Sobic001G374100 Sobic008G044100--Sobic001G374100 Sobic003G155100 Sobic003G155100 Sobic008G044100--Sobic003G155100 Sobic010G206900 Sobic010G206900 Sobic008G044100--Sobic010G206900 Sobic001G230000 Sobic001G230000 Sobic008G044100--Sobic001G230000 Sobic008G044100--Sobic008G001200 Sobic003G389200 Sobic003G389200 Sobic008G044100--Sobic003G389200 Sobic002G316600 Sobic002G316600 Sobic008G044100--Sobic002G316600 Sobic006G216100 Sobic006G216100 Sobic004G034800--Sobic006G216100 Sobic004G034800--Sobic010G176550 Sobic004G034800--Sobic003G138500 Sobic004G034800--Sobic002G127550 Sobic003G052200 Sobic003G052200 Sobic004G034800--Sobic003G052200 Sobic001G035900 Sobic001G035900 Sobic004G034800--Sobic001G035900 Sobic004G034800--Sobic007G116200 Sobic008G162900 Sobic008G162900 Sobic004G034800--Sobic008G162900 Sobic010G243900 Sobic010G243900 Sobic004G034800--Sobic010G243900 Sobic001G194200--Sobic004G291900 Sobic006G055200 Sobic006G055200 Sobic001G194200--Sobic006G055200 Sobic005G001000 Sobic005G001000 Sobic001G194200--Sobic005G001000 Sobic001G194200--Sobic010G010700 Sobic004G276400 Sobic004G276400 Sobic001G194200--Sobic004G276400 Sobic001G289800 Sobic001G289800 Sobic001G194200--Sobic001G289800 Sobic001G194200--Sobic008G001200 Sobic001G194200--Sobic010G206900 Sobic004G034900 Sobic004G034900 Sobic001G194200--Sobic004G034900 Sobic008G001200--Sobic003G155100 Sobic008G001200--Sobic010G206900 Sobic009G256400 Sobic009G256400 Sobic008G001200--Sobic009G256400 Sobic003G205200 Sobic003G205200 Sobic008G001200--Sobic003G205200 Sobic008G001200--Sobic010G010700 Sobic008G001200--Sobic001G194200 Sobic008G001200--Sobic005G001000 Sobic008G001200--Sobic004G276400 Sobic004G174200 Sobic004G174200 Sobic008G001200--Sobic004G174200 Sobic010G010700--Sobic010G206900 Sobic010G010700--Sobic004G034900 Sobic010G010700--Sobic004G276400 Sobic010G010700--Sobic001G194200 Sobic007G062800 Sobic007G062800 Sobic010G010700--Sobic007G062800 Sobic002G008900 Sobic002G008900 Sobic010G010700--Sobic002G008900 Sobic005G112300 Sobic005G112300 Sobic010G010700--Sobic005G112300 Sobic010G010700--Sobic008G001200 Sobic003G186000 Sobic003G186000 Sobic010G010700--Sobic003G186000 Sobic004G291900--Sobic001G194200 Sobic004G291900--Sobic001G289800 Sobic004G291900--Sobic004G174200 Sobic004G291900--Sobic004G276400 Sobic004G291900--Sobic005G001000 Sobic004G291900--Sobic004G034900 Sobic004G291900--Sobic009G256400 Sobic001G002000 Sobic001G002000 Sobic004G291900--Sobic001G002000 Sobic004G291900--Sobic010G010700 Sobic010G139000 Sobic010G139000 Sobic004G209600--Sobic010G139000 Sobic004G314000 Sobic004G314000 Sobic004G209600--Sobic004G314000 Sobic004G209600--Sobic010G010700 Sobic007G117400 Sobic007G117400 Sobic004G209600--Sobic007G117400 Sobic005G008800 Sobic005G008800 Sobic004G209600--Sobic005G008800 Sobic002G134200 Sobic002G134200 Sobic004G209600--Sobic002G134200 Sobic004G209600--Sobic005G112300 Sobic004G242400 Sobic004G242400 Sobic004G209600--Sobic004G242400 Sobic003G280800 Sobic003G280800 Sobic004G209600--Sobic003G280800
Octagon: transcription factors


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