Gene annotation
Transcriptome id Sobic.003G155100.1
Synonym Sb03g013535
Functional annotation suppressor of Mek, putative, expressed
UniProt C5XJS5
Pfam PF04802
Panther DB PTHR23318 PTHR23318:SF0
NCBI CDD KOG2175; Protein predicted to be involved in carbohydrate metabolism
KEGG Orthology K17491; SMEK, protein phosphatase 4 regulatory subunit 3
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G06670 : binding
RAP-DB (Rice) LOC_Os01g23590.1 : suppressor of Mek, putative, expressed
MaizeGDB (Corn) Zm00025a036197 , Zm00025a024445
Brachypodium KQK04234
Barley HORVU3Hr1G044880.9 , HORVU3Hr1G044880.8 , HORVU3Hr1G044880.1 , HORVU3Hr1G044880.3 , HORVU3Hr1G044880.2 , HORVU3Hr1G044880.5 , HORVU3Hr1G044880.4 , HORVU3Hr1G044880.7 , HORVU3Hr1G044880.6 , HORVU3Hr1G044880.33 , HORVU3Hr1G044880.19 , HORVU3Hr1G044880.31 , HORVU3Hr1G044880.30 , HORVU3Hr1G044880.36 , HORVU3Hr1G044880.35 , HORVU3Hr1G044880.11 , HORVU3Hr1G044880.28 , HORVU3Hr1G044880.29 , HORVU3Hr1G044880.20 , HORVU3Hr1G044880.21 , HORVU3Hr1G044880.22 , HORVU3Hr1G044880.23 , HORVU3Hr1G044880.24 , HORVU3Hr1G044880.25 , HORVU3Hr1G044880.26 , HORVU3Hr1G044880.18 , HORVU3Hr1G044880.15 , HORVU3Hr1G044880.14 , HORVU3Hr1G044880.17 , HORVU3Hr1G044880.16 , HORVU3Hr1G044880.10 , HORVU3Hr1G044880.13 , HORVU3Hr1G044880.12 , HORVU3Hr1G044880.27 , HORVU3Hr1G044880.32 , HORVU3Hr1G044880.37 , HORVU3Hr1G044880.34
Wheat TraesCS3B02G226400 , TraesCS3B02G226400 , TraesCS3B02G226400 , TraesCS3B02G226400 , TraesCS3D02G205900 , TraesCS3D02G205900 , TraesCS3D02G205900 , TraesCS3D02G205900 , TraesCS3D02G205900 , TraesCS3A02G197700 , TraesCS3A02G197700 , TraesCS3A02G197700 , TraesCS3A02G197700 , TraesCS3A02G197700 , TraesCS3A02G197700 , TraesCS3A02G197700 , TraesCS3D02G205900
Populus PNT23934


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
2 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
3 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
4 Sobic.001G230000 expressed protein K10779: transcriptional regulator ATRX
5 Sobic.001G375100 AAA-type ATPase family protein, putative, expressed -
6 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
7 Sobic.010G010700 PHD-finger family protein, expressed -
8 Sobic.009G256400 ATP binding protein, putative, expressed K15192: BTAF1, TATA-binding protein-associated factor
9 Sobic.004G291900 ESP4, putative, expressed K06100: symplekin
10 Sobic.001G365900 PWWP domain containing protein, expressed -
11 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -
12 Sobic.004G174200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
13 Sobic.001G457800 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed K18663: activating signal cointegrator complex subunit 3
14 Sobic.006G050700 disease resistance RPP13-like protein 1, putative, expressed -
15 Sobic.008G044100 expressed protein -
16 Sobic.002G346200 expressed protein -
17 Sobic.006G133900 NIN, putative, expressed -
18 Sobic.003G388100 expressed protein -
19 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
20 Sobic.001G527800 DCL2, putative, expressed K11592: DICER1, endoribonuclease Dicer


Gene co-expression network
sample Sobic003G155100 Sobic003G155100 Sobic008G001200 Sobic008G001200 Sobic003G155100--Sobic008G001200 Sobic006G219600 Sobic006G219600 Sobic003G155100--Sobic006G219600 Sobic010G206900 Sobic010G206900 Sobic003G155100--Sobic010G206900 Sobic001G230000 Sobic001G230000 Sobic003G155100--Sobic001G230000 Sobic001G375100 Sobic001G375100 Sobic003G155100--Sobic001G375100 Sobic001G194200 Sobic001G194200 Sobic003G155100--Sobic001G194200 Sobic010G010700 Sobic010G010700 Sobic003G155100--Sobic010G010700 Sobic009G256400 Sobic009G256400 Sobic003G155100--Sobic009G256400 Sobic004G291900 Sobic004G291900 Sobic003G155100--Sobic004G291900 Sobic008G001200--Sobic003G155100 Sobic008G001200--Sobic010G206900 Sobic008G001200--Sobic009G256400 Sobic003G205200 Sobic003G205200 Sobic008G001200--Sobic003G205200 Sobic008G001200--Sobic010G010700 Sobic008G001200--Sobic001G194200 Sobic005G001000 Sobic005G001000 Sobic008G001200--Sobic005G001000 Sobic004G276400 Sobic004G276400 Sobic008G001200--Sobic004G276400 Sobic004G174200 Sobic004G174200 Sobic008G001200--Sobic004G174200 Sobic006G219600--Sobic003G155100 Sobic009G201300 Sobic009G201300 Sobic006G219600--Sobic009G201300 Sobic002G124600 Sobic002G124600 Sobic006G219600--Sobic002G124600 Sobic006G050700 Sobic006G050700 Sobic006G219600--Sobic006G050700 Sobic001G298900 Sobic001G298900 Sobic006G219600--Sobic001G298900 Sobic006G133900 Sobic006G133900 Sobic006G219600--Sobic006G133900 Sobic001G133000 Sobic001G133000 Sobic006G219600--Sobic001G133000 Sobic005G106600 Sobic005G106600 Sobic006G219600--Sobic005G106600 Sobic005G084500 Sobic005G084500 Sobic006G219600--Sobic005G084500 Sobic010G206900--Sobic010G010700 Sobic001G365900 Sobic001G365900 Sobic010G206900--Sobic001G365900 Sobic004G034900 Sobic004G034900 Sobic010G206900--Sobic004G034900 Sobic001G534700 Sobic001G534700 Sobic010G206900--Sobic001G534700 Sobic010G247800 Sobic010G247800 Sobic010G206900--Sobic010G247800 Sobic002G411600 Sobic002G411600 Sobic010G206900--Sobic002G411600 Sobic010G206900--Sobic008G001200 Sobic003G196300 Sobic003G196300 Sobic010G206900--Sobic003G196300 Sobic009G165700 Sobic009G165700 Sobic010G206900--Sobic009G165700 Sobic001G230000--Sobic010G206900 Sobic001G230000--Sobic003G155100 Sobic001G230000--Sobic008G001200 Sobic001G230000--Sobic004G276400 Sobic004G223000 Sobic004G223000 Sobic001G230000--Sobic004G223000 Sobic009G256300 Sobic009G256300 Sobic001G230000--Sobic009G256300 Sobic001G230000--Sobic010G010700 Sobic001G230000--Sobic001G298900 Sobic008G044100 Sobic008G044100 Sobic001G230000--Sobic008G044100 Sobic001G375100--Sobic003G155100 Sobic001G375100--Sobic008G001200 Sobic005G149200 Sobic005G149200 Sobic001G375100--Sobic005G149200 Sobic003G247500 Sobic003G247500 Sobic001G375100--Sobic003G247500 Sobic001G454500 Sobic001G454500 Sobic001G375100--Sobic001G454500 Sobic001G375100--Sobic010G010700 Sobic002G008900 Sobic002G008900 Sobic001G375100--Sobic002G008900 Sobic007G198300 Sobic007G198300 Sobic001G375100--Sobic007G198300 Sobic001G375100--Sobic005G001000 Sobic001G194200--Sobic004G291900 Sobic006G055200 Sobic006G055200 Sobic001G194200--Sobic006G055200 Sobic001G194200--Sobic005G001000 Sobic001G194200--Sobic010G010700 Sobic001G194200--Sobic004G276400 Sobic001G289800 Sobic001G289800 Sobic001G194200--Sobic001G289800 Sobic001G194200--Sobic008G001200 Sobic001G194200--Sobic010G206900 Sobic001G194200--Sobic004G034900 Sobic010G010700--Sobic010G206900 Sobic010G010700--Sobic004G034900 Sobic010G010700--Sobic004G276400 Sobic010G010700--Sobic001G194200 Sobic007G062800 Sobic007G062800 Sobic010G010700--Sobic007G062800 Sobic010G010700--Sobic002G008900 Sobic005G112300 Sobic005G112300 Sobic010G010700--Sobic005G112300 Sobic010G010700--Sobic008G001200 Sobic003G186000 Sobic003G186000 Sobic010G010700--Sobic003G186000 Sobic001G457800 Sobic001G457800 Sobic009G256400--Sobic001G457800 Sobic009G256400--Sobic008G001200 Sobic001G370900 Sobic001G370900 Sobic009G256400--Sobic001G370900 Sobic009G256400--Sobic004G291900 Sobic009G256400--Sobic005G001000 Sobic003G166750 Sobic003G166750 Sobic009G256400--Sobic003G166750 Sobic009G256400--Sobic001G194200 Sobic009G256400--Sobic004G276400 Sobic009G256400--Sobic010G010700 Sobic004G291900--Sobic001G194200 Sobic004G291900--Sobic001G289800 Sobic004G291900--Sobic004G174200 Sobic004G291900--Sobic004G276400 Sobic004G291900--Sobic005G001000 Sobic004G291900--Sobic004G034900 Sobic004G291900--Sobic009G256400 Sobic001G002000 Sobic001G002000 Sobic004G291900--Sobic001G002000 Sobic004G291900--Sobic010G010700
Octagon: transcription factors


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