Gene annotation
Transcriptome id Sobic.002G346200.1
Synonym Sb02g036890, TIC
Functional annotation expressed protein
UniProt A0A1W0W6T5
Pfam -
Panther DB PTHR34798 PTHR34798:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G22380 : time for coffee
RAP-DB (Rice) LOC_Os07g38360.2 : expressed protein
MaizeGDB (Corn) Zm00025a048452 , Zm00025a014948
Brachypodium -
Barley HORVU2Hr1G038480.9 , HORVU2Hr1G038480.3 , HORVU2Hr1G038480.7 , HORVU2Hr1G038480.6 , HORVU2Hr1G038480.5 , HORVU2Hr1G038480.4 , HORVU2Hr1G038480.19 , HORVU2Hr1G038480.18 , HORVU2Hr1G038480.13 , HORVU2Hr1G038480.12 , HORVU2Hr1G038480.11 , HORVU2Hr1G038480.10 , HORVU2Hr1G038480.17 , HORVU2Hr1G038480.16 , HORVU2Hr1G038480.15 , HORVU2Hr1G038480.14 , HORVU2Hr1G038480.22 , HORVU2Hr1G038480.23 , HORVU2Hr1G038480.8 , HORVU2Hr1G038480.21 , HORVU2Hr1G038480.26 , HORVU2Hr1G038480.27 , HORVU2Hr1G038480.24 , HORVU2Hr1G038480.25
Wheat TraesCS2D02G205800 , TraesCS2B02G225200 , TraesCS2B02G225200 , TraesCS2B02G225200 , TraesCS2A02G197800 , TraesCS2A02G197800 , TraesCS2A02G197800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
2 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
3 Sobic.003G196300 DNA binding protein, putative, expressed -
4 Sobic.006G050700 disease resistance RPP13-like protein 1, putative, expressed -
5 Sobic.001G365900 PWWP domain containing protein, expressed -
6 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -
7 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
8 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
9 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
10 Sobic.001G289800 BAH domain containing protein, putative, expressed -
11 Sobic.008G130100 protein kinase family protein, putative, expressed -
12 Sobic.003G166750 - K15188: cyclin T
13 Sobic.002G316600 expressed protein -
14 Sobic.001G527800 DCL2, putative, expressed K11592: DICER1, endoribonuclease Dicer
15 Sobic.003G388100 expressed protein -
16 Sobic.010G010700 PHD-finger family protein, expressed -
17 Sobic.003G313500 MATH domain containing protein, expressed -
18 Sobic.003G389200 Rad21 / Rec8 like protein, putative, expressed K06670: SCC1, MCD1, cohesin complex subunit SCC1
19 Sobic.003G205200 expressed protein K19027: zinc finger FYVE domain-containing protein 26
20 Sobic.004G174200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16


Gene co-expression network
sample Sobic002G346200 Sobic002G346200 Sobic003G155100 Sobic003G155100 Sobic002G346200--Sobic003G155100 Sobic008G001200 Sobic008G001200 Sobic002G346200--Sobic008G001200 Sobic003G196300 Sobic003G196300 Sobic002G346200--Sobic003G196300 Sobic006G050700 Sobic006G050700 Sobic002G346200--Sobic006G050700 Sobic001G365900 Sobic001G365900 Sobic002G346200--Sobic001G365900 Sobic001G534700 Sobic001G534700 Sobic002G346200--Sobic001G534700 Sobic010G206900 Sobic010G206900 Sobic002G346200--Sobic010G206900 Sobic001G194200 Sobic001G194200 Sobic002G346200--Sobic001G194200 Sobic006G219600 Sobic006G219600 Sobic002G346200--Sobic006G219600 Sobic003G155100--Sobic008G001200 Sobic003G155100--Sobic006G219600 Sobic003G155100--Sobic010G206900 Sobic001G230000 Sobic001G230000 Sobic003G155100--Sobic001G230000 Sobic001G375100 Sobic001G375100 Sobic003G155100--Sobic001G375100 Sobic003G155100--Sobic001G194200 Sobic010G010700 Sobic010G010700 Sobic003G155100--Sobic010G010700 Sobic009G256400 Sobic009G256400 Sobic003G155100--Sobic009G256400 Sobic004G291900 Sobic004G291900 Sobic003G155100--Sobic004G291900 Sobic008G001200--Sobic003G155100 Sobic008G001200--Sobic010G206900 Sobic008G001200--Sobic009G256400 Sobic003G205200 Sobic003G205200 Sobic008G001200--Sobic003G205200 Sobic008G001200--Sobic010G010700 Sobic008G001200--Sobic001G194200 Sobic005G001000 Sobic005G001000 Sobic008G001200--Sobic005G001000 Sobic004G276400 Sobic004G276400 Sobic008G001200--Sobic004G276400 Sobic004G174200 Sobic004G174200 Sobic008G001200--Sobic004G174200 Sobic003G196300--Sobic010G206900 Sobic004G034900 Sobic004G034900 Sobic003G196300--Sobic004G034900 Sobic003G196300--Sobic001G194200 Sobic007G063000 Sobic007G063000 Sobic003G196300--Sobic007G063000 Sobic001G289800 Sobic001G289800 Sobic003G196300--Sobic001G289800 Sobic003G196300--Sobic004G276400 Sobic010G247800 Sobic010G247800 Sobic003G196300--Sobic010G247800 Sobic009G256300 Sobic009G256300 Sobic003G196300--Sobic009G256300 Sobic003G196300--Sobic001G534700 Sobic006G050700--Sobic003G155100 Sobic006G050700--Sobic006G219600 Sobic006G050700--Sobic008G001200 Sobic009G201300 Sobic009G201300 Sobic006G050700--Sobic009G201300 Sobic006G050700--Sobic002G346200 Sobic004G042200 Sobic004G042200 Sobic006G050700--Sobic004G042200 Sobic006G050700--Sobic010G206900 Sobic006G050700--Sobic001G230000 Sobic001G527800 Sobic001G527800 Sobic006G050700--Sobic001G527800 Sobic001G365900--Sobic010G206900 Sobic001G365900--Sobic001G534700 Sobic001G289600 Sobic001G289600 Sobic001G365900--Sobic001G289600 Sobic008G130100 Sobic008G130100 Sobic001G365900--Sobic008G130100 Sobic002G411600 Sobic002G411600 Sobic001G365900--Sobic002G411600 Sobic002G008900 Sobic002G008900 Sobic001G365900--Sobic002G008900 Sobic009G191000 Sobic009G191000 Sobic001G365900--Sobic009G191000 Sobic001G365900--Sobic004G034900 Sobic001G540400 Sobic001G540400 Sobic001G365900--Sobic001G540400 Sobic001G534700--Sobic010G206900 Sobic001G534700--Sobic001G365900 Sobic001G534700--Sobic002G411600 Sobic003G316500 Sobic003G316500 Sobic001G534700--Sobic003G316500 Sobic009G165700 Sobic009G165700 Sobic001G534700--Sobic009G165700 Sobic001G534700--Sobic004G034900 Sobic001G534700--Sobic002G008900 Sobic003G422500 Sobic003G422500 Sobic001G534700--Sobic003G422500 Sobic001G534700--Sobic008G001200 Sobic010G206900--Sobic010G010700 Sobic010G206900--Sobic001G365900 Sobic010G206900--Sobic004G034900 Sobic010G206900--Sobic001G534700 Sobic010G206900--Sobic010G247800 Sobic010G206900--Sobic002G411600 Sobic010G206900--Sobic008G001200 Sobic010G206900--Sobic003G196300 Sobic010G206900--Sobic009G165700 Sobic001G194200--Sobic004G291900 Sobic006G055200 Sobic006G055200 Sobic001G194200--Sobic006G055200 Sobic001G194200--Sobic005G001000 Sobic001G194200--Sobic010G010700 Sobic001G194200--Sobic004G276400 Sobic001G194200--Sobic001G289800 Sobic001G194200--Sobic008G001200 Sobic001G194200--Sobic010G206900 Sobic001G194200--Sobic004G034900 Sobic006G219600--Sobic003G155100 Sobic006G219600--Sobic009G201300 Sobic002G124600 Sobic002G124600 Sobic006G219600--Sobic002G124600 Sobic006G219600--Sobic006G050700 Sobic001G298900 Sobic001G298900 Sobic006G219600--Sobic001G298900 Sobic006G133900 Sobic006G133900 Sobic006G219600--Sobic006G133900 Sobic001G133000 Sobic001G133000 Sobic006G219600--Sobic001G133000 Sobic005G106600 Sobic005G106600 Sobic006G219600--Sobic005G106600 Sobic005G084500 Sobic005G084500 Sobic006G219600--Sobic005G084500
Octagon: transcription factors


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