Gene annotation
Transcriptome id Sobic.006G050700.1
Synonym
Functional annotation disease resistance RPP13-like protein 1, putative, expressed
UniProt A0A1B6PKA4
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF563
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14470 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g29980.1 : disease resistance RPP13-like protein 1, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
2 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
3 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
4 Sobic.009G201300 - -
5 Sobic.002G346200 expressed protein -
6 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
7 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
8 Sobic.001G230000 expressed protein K10779: transcriptional regulator ATRX
9 Sobic.001G527800 DCL2, putative, expressed K11592: DICER1, endoribonuclease Dicer
10 Sobic.003G166750 - K15188: cyclin T
11 Sobic.008G044100 expressed protein -
12 Sobic.003G119600 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.006G133900 NIN, putative, expressed -
14 Sobic.004G174200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
15 Sobic.002G257750 - -
16 Sobic.009G165700 SAC3/GANP family protein, putative, expressed -
17 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -
18 Sobic.009G215500 transcription initiation factor IIB, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
19 Sobic.004G244900 expressed protein -
20 Sobic.004G356700 oligopeptidase, putative, expressed K01414: oligopeptidase A


Gene co-expression network
sample Sobic006G050700 Sobic006G050700 Sobic003G155100 Sobic003G155100 Sobic006G050700--Sobic003G155100 Sobic006G219600 Sobic006G219600 Sobic006G050700--Sobic006G219600 Sobic008G001200 Sobic008G001200 Sobic006G050700--Sobic008G001200 Sobic009G201300 Sobic009G201300 Sobic006G050700--Sobic009G201300 Sobic002G346200 Sobic002G346200 Sobic006G050700--Sobic002G346200 Sobic004G042200 Sobic004G042200 Sobic006G050700--Sobic004G042200 Sobic010G206900 Sobic010G206900 Sobic006G050700--Sobic010G206900 Sobic001G230000 Sobic001G230000 Sobic006G050700--Sobic001G230000 Sobic001G527800 Sobic001G527800 Sobic006G050700--Sobic001G527800 Sobic003G155100--Sobic008G001200 Sobic003G155100--Sobic006G219600 Sobic003G155100--Sobic010G206900 Sobic003G155100--Sobic001G230000 Sobic001G375100 Sobic001G375100 Sobic003G155100--Sobic001G375100 Sobic001G194200 Sobic001G194200 Sobic003G155100--Sobic001G194200 Sobic010G010700 Sobic010G010700 Sobic003G155100--Sobic010G010700 Sobic009G256400 Sobic009G256400 Sobic003G155100--Sobic009G256400 Sobic004G291900 Sobic004G291900 Sobic003G155100--Sobic004G291900 Sobic006G219600--Sobic003G155100 Sobic006G219600--Sobic009G201300 Sobic002G124600 Sobic002G124600 Sobic006G219600--Sobic002G124600 Sobic006G219600--Sobic006G050700 Sobic001G298900 Sobic001G298900 Sobic006G219600--Sobic001G298900 Sobic006G133900 Sobic006G133900 Sobic006G219600--Sobic006G133900 Sobic001G133000 Sobic001G133000 Sobic006G219600--Sobic001G133000 Sobic005G106600 Sobic005G106600 Sobic006G219600--Sobic005G106600 Sobic005G084500 Sobic005G084500 Sobic006G219600--Sobic005G084500 Sobic008G001200--Sobic003G155100 Sobic008G001200--Sobic010G206900 Sobic008G001200--Sobic009G256400 Sobic003G205200 Sobic003G205200 Sobic008G001200--Sobic003G205200 Sobic008G001200--Sobic010G010700 Sobic008G001200--Sobic001G194200 Sobic005G001000 Sobic005G001000 Sobic008G001200--Sobic005G001000 Sobic004G276400 Sobic004G276400 Sobic008G001200--Sobic004G276400 Sobic004G174200 Sobic004G174200 Sobic008G001200--Sobic004G174200 Sobic009G201300--Sobic006G219600 Sobic009G201300--Sobic003G155100 Sobic009G201300--Sobic006G050700 Sobic003G119600 Sobic003G119600 Sobic009G201300--Sobic003G119600 Sobic004G244900 Sobic004G244900 Sobic009G201300--Sobic004G244900 Sobic009G201300--Sobic001G133000 Sobic009G201300--Sobic008G001200 Sobic001G457800 Sobic001G457800 Sobic009G201300--Sobic001G457800 Sobic002G211800 Sobic002G211800 Sobic009G201300--Sobic002G211800 Sobic002G346200--Sobic003G155100 Sobic002G346200--Sobic008G001200 Sobic003G196300 Sobic003G196300 Sobic002G346200--Sobic003G196300 Sobic002G346200--Sobic006G050700 Sobic001G365900 Sobic001G365900 Sobic002G346200--Sobic001G365900 Sobic001G534700 Sobic001G534700 Sobic002G346200--Sobic001G534700 Sobic002G346200--Sobic010G206900 Sobic002G346200--Sobic001G194200 Sobic002G346200--Sobic006G219600 Sobic009G038900 Sobic009G038900 Sobic004G042200--Sobic009G038900 Sobic010G002700 Sobic010G002700 Sobic004G042200--Sobic010G002700 Sobic003G191700 Sobic003G191700 Sobic004G042200--Sobic003G191700 Sobic004G042200--Sobic006G050700 Sobic003G220100 Sobic003G220100 Sobic004G042200--Sobic003G220100 Sobic004G042200--Sobic003G155100 Sobic010G243900 Sobic010G243900 Sobic004G042200--Sobic010G243900 Sobic004G042200--Sobic005G106600 Sobic004G042200--Sobic006G133900 Sobic010G206900--Sobic010G010700 Sobic010G206900--Sobic001G365900 Sobic004G034900 Sobic004G034900 Sobic010G206900--Sobic004G034900 Sobic010G206900--Sobic001G534700 Sobic010G247800 Sobic010G247800 Sobic010G206900--Sobic010G247800 Sobic002G411600 Sobic002G411600 Sobic010G206900--Sobic002G411600 Sobic010G206900--Sobic008G001200 Sobic010G206900--Sobic003G196300 Sobic009G165700 Sobic009G165700 Sobic010G206900--Sobic009G165700 Sobic001G230000--Sobic010G206900 Sobic001G230000--Sobic003G155100 Sobic001G230000--Sobic008G001200 Sobic001G230000--Sobic004G276400 Sobic004G223000 Sobic004G223000 Sobic001G230000--Sobic004G223000 Sobic009G256300 Sobic009G256300 Sobic001G230000--Sobic009G256300 Sobic001G230000--Sobic010G010700 Sobic001G230000--Sobic001G298900 Sobic008G044100 Sobic008G044100 Sobic001G230000--Sobic008G044100 Sobic002G316600 Sobic002G316600 Sobic001G527800--Sobic002G316600 Sobic001G527800--Sobic008G001200 Sobic001G527800--Sobic004G276400 Sobic001G527800--Sobic010G206900 Sobic003G166750 Sobic003G166750 Sobic001G527800--Sobic003G166750 Sobic003G186000 Sobic003G186000 Sobic001G527800--Sobic003G186000 Sobic001G527800--Sobic003G196300 Sobic007G103100 Sobic007G103100 Sobic001G527800--Sobic007G103100 Sobic010G123600 Sobic010G123600 Sobic001G527800--Sobic010G123600
Octagon: transcription factors


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