Gene annotation
Transcriptome id Sobic.003G119600.3,Sobic.003G119600.5,Sobic.003G119600.1,Sobic.003G119600.4,Sobic.003G119600.2
Synonym Sb03g010110
Functional annotation zinc finger, C3HC4 type domain containing protein, expressed
UniProt A0A1W0VWY7 , A0A1B6Q2P8 , A0A1W0VWZ0
Pfam -
Panther DB PTHR31150 PTHR31150:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G75400 : RING/U-box superfamily protein
RAP-DB (Rice) LOC_Os01g15630.1 : zinc finger, C3HC4 type domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G201300 - -
2 Sobic.001G439300 AGAP009131-PA, putative, expressed K18826: calmodulin-lysine N-methyltransferase
3 Sobic.002G325300 acyltransferase, putative, expressed K13506: GPAT3_4, AGPAT9, glycerol-3-phosphate O-acyltransferase 3/4
4 Sobic.004G244900 expressed protein -
5 Sobic.002G257750 - -
6 Sobic.005G106600 CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
7 Sobic.004G356700 oligopeptidase, putative, expressed K01414: oligopeptidase A
8 Sobic.003G253600 protein kinase domain containing protein, expressed -
9 Sobic.003G354600 csAtPR5, putative, expressed -
10 Sobic.006G050700 disease resistance RPP13-like protein 1, putative, expressed -
11 Sobic.006G185100 ranBP1 domain containing protein, expressed K14295: NUP50, nuclear pore complex protein Nup50
12 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
13 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
14 Sobic.003G247500 expressed protein -
15 Sobic.001G111850 - -
16 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
17 Sobic.006G041600 WD domain, G-beta repeat domain containing protein, expressed K17985: activating molecule in BECN1-regulated autophagy protein 1
18 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
19 Sobic.010G123600 WW domain containing protein, expressed -
20 Sobic.002G091600 methyltransferase, putative, expressed -


Gene co-expression network
sample Sobic003G119600 Sobic003G119600 Sobic009G201300 Sobic009G201300 Sobic003G119600--Sobic009G201300 Sobic001G439300 Sobic001G439300 Sobic003G119600--Sobic001G439300 Sobic002G325300 Sobic002G325300 Sobic003G119600--Sobic002G325300 Sobic004G244900 Sobic004G244900 Sobic003G119600--Sobic004G244900 Sobic002G257750 Sobic002G257750 Sobic003G119600--Sobic002G257750 Sobic005G106600 Sobic005G106600 Sobic003G119600--Sobic005G106600 Sobic004G356700 Sobic004G356700 Sobic003G119600--Sobic004G356700 Sobic003G253600 Sobic003G253600 Sobic003G119600--Sobic003G253600 Sobic003G354600 Sobic003G354600 Sobic003G119600--Sobic003G354600 Sobic006G219600 Sobic006G219600 Sobic009G201300--Sobic006G219600 Sobic003G155100 Sobic003G155100 Sobic009G201300--Sobic003G155100 Sobic006G050700 Sobic006G050700 Sobic009G201300--Sobic006G050700 Sobic009G201300--Sobic003G119600 Sobic009G201300--Sobic004G244900 Sobic001G133000 Sobic001G133000 Sobic009G201300--Sobic001G133000 Sobic008G001200 Sobic008G001200 Sobic009G201300--Sobic008G001200 Sobic001G457800 Sobic001G457800 Sobic009G201300--Sobic001G457800 Sobic002G211800 Sobic002G211800 Sobic009G201300--Sobic002G211800 Sobic001G111850 Sobic001G111850 Sobic001G439300--Sobic001G111850 Sobic001G439300--Sobic003G119600 Sobic001G370900 Sobic001G370900 Sobic001G439300--Sobic001G370900 Sobic002G042600 Sobic002G042600 Sobic001G439300--Sobic002G042600 Sobic009G255700 Sobic009G255700 Sobic001G439300--Sobic009G255700 Sobic001G451450 Sobic001G451450 Sobic001G439300--Sobic001G451450 Sobic001G194200 Sobic001G194200 Sobic001G439300--Sobic001G194200 Sobic001G065100 Sobic001G065100 Sobic001G439300--Sobic001G065100 Sobic001G439300--Sobic008G001200 Sobic006G185100 Sobic006G185100 Sobic002G325300--Sobic006G185100 Sobic002G325300--Sobic001G194200 Sobic006G252900 Sobic006G252900 Sobic002G325300--Sobic006G252900 Sobic003G247500 Sobic003G247500 Sobic002G325300--Sobic003G247500 Sobic002G325300--Sobic003G119600 Sobic006G041600 Sobic006G041600 Sobic002G325300--Sobic006G041600 Sobic002G325300--Sobic008G001200 Sobic002G325300--Sobic004G244900 Sobic009G256400 Sobic009G256400 Sobic002G325300--Sobic009G256400 Sobic004G244900--Sobic001G457800 Sobic004G334300 Sobic004G334300 Sobic004G244900--Sobic004G334300 Sobic004G244900--Sobic003G119600 Sobic004G244900--Sobic003G155100 Sobic004G244900--Sobic008G001200 Sobic004G244900--Sobic004G356700 Sobic004G244900--Sobic009G201300 Sobic002G275700 Sobic002G275700 Sobic004G244900--Sobic002G275700 Sobic003G168100 Sobic003G168100 Sobic004G244900--Sobic003G168100 Sobic003G398700 Sobic003G398700 Sobic002G257750--Sobic003G398700 Sobic002G257750--Sobic005G106600 Sobic002G257750--Sobic003G119600 Sobic002G257750--Sobic003G253600 Sobic002G257750--Sobic006G185100 Sobic003G388100 Sobic003G388100 Sobic002G257750--Sobic003G388100 Sobic002G257750--Sobic006G050700 Sobic002G257750--Sobic004G244900 Sobic010G132600 Sobic010G132600 Sobic002G257750--Sobic010G132600 Sobic003G220100 Sobic003G220100 Sobic005G106600--Sobic003G220100 Sobic001G333800 Sobic001G333800 Sobic005G106600--Sobic001G333800 Sobic009G038900 Sobic009G038900 Sobic005G106600--Sobic009G038900 Sobic005G106600--Sobic001G133000 Sobic004G312600 Sobic004G312600 Sobic005G106600--Sobic004G312600 Sobic007G058100 Sobic007G058100 Sobic005G106600--Sobic007G058100 Sobic007G136200 Sobic007G136200 Sobic005G106600--Sobic007G136200 Sobic005G106600--Sobic006G219600 Sobic001G378100 Sobic001G378100 Sobic005G106600--Sobic001G378100 Sobic004G356700--Sobic008G001200 Sobic004G356700--Sobic001G194200 Sobic002G146300 Sobic002G146300 Sobic004G356700--Sobic002G146300 Sobic004G001500 Sobic004G001500 Sobic004G356700--Sobic004G001500 Sobic004G356700--Sobic009G256400 Sobic004G356700--Sobic004G244900 Sobic004G356700--Sobic003G155100 Sobic004G356700--Sobic006G219600 Sobic004G356700--Sobic004G334300 Sobic003G253600--Sobic006G185100 Sobic003G253600--Sobic002G257750 Sobic003G253600--Sobic003G119600 Sobic002G344000 Sobic002G344000 Sobic003G253600--Sobic002G344000 Sobic001G332500 Sobic001G332500 Sobic003G253600--Sobic001G332500 Sobic003G316500 Sobic003G316500 Sobic003G253600--Sobic003G316500 Sobic003G253600--Sobic003G155100 Sobic005G059800 Sobic005G059800 Sobic003G253600--Sobic005G059800 Sobic008G044100 Sobic008G044100 Sobic003G253600--Sobic008G044100 Sobic001G136800 Sobic001G136800 Sobic003G354600--Sobic001G136800 Sobic003G354600--Sobic003G119600 Sobic002G305000 Sobic002G305000 Sobic003G354600--Sobic002G305000 Sobic004G054100 Sobic004G054100 Sobic003G354600--Sobic004G054100 Sobic001G355800 Sobic001G355800 Sobic003G354600--Sobic001G355800 Sobic010G210500 Sobic010G210500 Sobic003G354600--Sobic010G210500 Sobic003G354600--Sobic009G201300 Sobic002G181600 Sobic002G181600 Sobic003G354600--Sobic002G181600 Sobic003G220800 Sobic003G220800 Sobic003G354600--Sobic003G220800
Octagon: transcription factors


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