Gene annotation
Transcriptome id Sobic.001G439300.1
Synonym Sb01g041300
Functional annotation AGAP009131-PA, putative, expressed
UniProt A0A1B6QPD9
Pfam PF10294
Panther DB PTHR13539
NCBI CDD KOG3201; Uncharacterized conserved protein
KEGG Orthology K18826; calmodulin-lysine N-methyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G35987 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os03g14020.1 : AGAP009131-PA, putative, expressed
MaizeGDB (Corn) Zm00025a052903
Brachypodium PNT77748 , PNT77743 , PNT77742 , PNT77741 , PNT77747 , PNT77746 , PNT77745 , PNT77744 , KQK20566 , KQK22605
Barley HORVU4Hr1G063710.1 , HORVU4Hr1G063710.3 , HORVU4Hr1G063710.2 , HORVU4Hr1G063710.5 , HORVU4Hr1G063710.4 , HORVU4Hr1G063710.7 , HORVU4Hr1G063710.6 , HORVU4Hr1G063710.9 , HORVU4Hr1G063710.8 , HORVU4Hr1G063710.32 , HORVU4Hr1G063710.30 , HORVU4Hr1G063710.20 , HORVU4Hr1G063710.21 , HORVU4Hr1G063710.22 , HORVU4Hr1G063710.24 , HORVU4Hr1G063710.25 , HORVU4Hr1G063710.26 , HORVU4Hr1G063710.27 , HORVU4Hr1G063710.28 , HORVU4Hr1G063710.29 , HORVU4Hr1G063710.31 , HORVU4Hr1G063710.15 , HORVU4Hr1G063710.14 , HORVU4Hr1G063710.17 , HORVU4Hr1G063710.16 , HORVU4Hr1G063710.11 , HORVU4Hr1G063710.10 , HORVU4Hr1G063710.13 , HORVU4Hr1G063710.12 , HORVU4Hr1G063710.19 , HORVU4Hr1G063710.18
Wheat TraesCS4D02G227600 , TraesCS4A02G070900 , TraesCS4B02G226900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G111850 - -
2 Sobic.003G119600 zinc finger, C3HC4 type domain containing protein, expressed -
3 Sobic.001G370900 expressed protein K11665: INO80, DNA helicase INO80
4 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
5 Sobic.009G255700 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
6 Sobic.001G451450 - -
7 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
8 Sobic.001G065100 cullin, putative, expressed K10609: cullin 4
9 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
10 Sobic.008G088872 - -
11 Sobic.004G334300 ATMAK10, putative, expressed -
12 Sobic.006G041600 WD domain, G-beta repeat domain containing protein, expressed K17985: activating molecule in BECN1-regulated autophagy protein 1
13 Sobic.001G457800 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed K18663: activating signal cointegrator complex subunit 3
14 Sobic.008G098900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
15 Sobic.002G146300 cig3, putative, expressed K14409: SMG7, protein SMG7
16 Sobic.010G123600 WW domain containing protein, expressed -
17 Sobic.004G356700 oligopeptidase, putative, expressed K01414: oligopeptidase A
18 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
19 Sobic.009G201300 - -
20 Sobic.009G256400 ATP binding protein, putative, expressed K15192: BTAF1, TATA-binding protein-associated factor


Gene co-expression network
sample Sobic001G439300 Sobic001G439300 Sobic001G111850 Sobic001G111850 Sobic001G439300--Sobic001G111850 Sobic003G119600 Sobic003G119600 Sobic001G439300--Sobic003G119600 Sobic001G370900 Sobic001G370900 Sobic001G439300--Sobic001G370900 Sobic002G042600 Sobic002G042600 Sobic001G439300--Sobic002G042600 Sobic009G255700 Sobic009G255700 Sobic001G439300--Sobic009G255700 Sobic001G451450 Sobic001G451450 Sobic001G439300--Sobic001G451450 Sobic001G194200 Sobic001G194200 Sobic001G439300--Sobic001G194200 Sobic001G065100 Sobic001G065100 Sobic001G439300--Sobic001G065100 Sobic008G001200 Sobic008G001200 Sobic001G439300--Sobic008G001200 Sobic003G166750 Sobic003G166750 Sobic001G111850--Sobic003G166750 Sobic009G165700 Sobic009G165700 Sobic001G111850--Sobic009G165700 Sobic001G111850--Sobic001G439300 Sobic001G111850--Sobic008G001200 Sobic009G256400 Sobic009G256400 Sobic001G111850--Sobic009G256400 Sobic001G433800 Sobic001G433800 Sobic001G111850--Sobic001G433800 Sobic001G111850--Sobic001G370900 Sobic010G123600 Sobic010G123600 Sobic001G111850--Sobic010G123600 Sobic001G111850--Sobic002G042600 Sobic009G201300 Sobic009G201300 Sobic003G119600--Sobic009G201300 Sobic003G119600--Sobic001G439300 Sobic002G325300 Sobic002G325300 Sobic003G119600--Sobic002G325300 Sobic004G244900 Sobic004G244900 Sobic003G119600--Sobic004G244900 Sobic002G257750 Sobic002G257750 Sobic003G119600--Sobic002G257750 Sobic005G106600 Sobic005G106600 Sobic003G119600--Sobic005G106600 Sobic004G356700 Sobic004G356700 Sobic003G119600--Sobic004G356700 Sobic003G253600 Sobic003G253600 Sobic003G119600--Sobic003G253600 Sobic003G354600 Sobic003G354600 Sobic003G119600--Sobic003G354600 Sobic008G098900 Sobic008G098900 Sobic001G370900--Sobic008G098900 Sobic005G001000 Sobic005G001000 Sobic001G370900--Sobic005G001000 Sobic001G370900--Sobic009G256400 Sobic002G146300 Sobic002G146300 Sobic001G370900--Sobic002G146300 Sobic003G205200 Sobic003G205200 Sobic001G370900--Sobic003G205200 Sobic001G370900--Sobic001G194200 Sobic004G276400 Sobic004G276400 Sobic001G370900--Sobic004G276400 Sobic001G370900--Sobic008G001200 Sobic001G457800 Sobic001G457800 Sobic001G370900--Sobic001G457800 Sobic002G042600--Sobic001G065100 Sobic006G184900 Sobic006G184900 Sobic002G042600--Sobic006G184900 Sobic002G042600--Sobic008G098900 Sobic002G401500 Sobic002G401500 Sobic002G042600--Sobic002G401500 Sobic002G179400 Sobic002G179400 Sobic002G042600--Sobic002G179400 Sobic004G322400 Sobic004G322400 Sobic002G042600--Sobic004G322400 Sobic002G429300 Sobic002G429300 Sobic002G042600--Sobic002G429300 Sobic008G088872 Sobic008G088872 Sobic002G042600--Sobic008G088872 Sobic002G042600--Sobic001G370900 Sobic001G192000 Sobic001G192000 Sobic009G255700--Sobic001G192000 Sobic009G255700--Sobic008G088872 Sobic002G275700 Sobic002G275700 Sobic009G255700--Sobic002G275700 Sobic009G255700--Sobic001G370900 Sobic005G162500 Sobic005G162500 Sobic009G255700--Sobic005G162500 Sobic009G255700--Sobic006G184900 Sobic002G308700 Sobic002G308700 Sobic009G255700--Sobic002G308700 Sobic002G335600 Sobic002G335600 Sobic009G255700--Sobic002G335600 Sobic009G255700--Sobic004G244900 Sobic001G451450--Sobic001G111850 Sobic001G451450--Sobic003G166750 Sobic001G451450--Sobic009G165700 Sobic001G451450--Sobic009G201300 Sobic001G451450--Sobic009G255700 Sobic001G451450--Sobic001G439300 Sobic002G211800 Sobic002G211800 Sobic001G451450--Sobic002G211800 Sobic001G451450--Sobic008G001200 Sobic010G226000 Sobic010G226000 Sobic001G451450--Sobic010G226000 Sobic004G291900 Sobic004G291900 Sobic001G194200--Sobic004G291900 Sobic006G055200 Sobic006G055200 Sobic001G194200--Sobic006G055200 Sobic001G194200--Sobic005G001000 Sobic010G010700 Sobic010G010700 Sobic001G194200--Sobic010G010700 Sobic001G194200--Sobic004G276400 Sobic001G289800 Sobic001G289800 Sobic001G194200--Sobic001G289800 Sobic001G194200--Sobic008G001200 Sobic010G206900 Sobic010G206900 Sobic001G194200--Sobic010G206900 Sobic004G034900 Sobic004G034900 Sobic001G194200--Sobic004G034900 Sobic001G065100--Sobic002G042600 Sobic001G065100--Sobic002G179400 Sobic001G263600 Sobic001G263600 Sobic001G065100--Sobic001G263600 Sobic001G065100--Sobic002G401500 Sobic001G493700 Sobic001G493700 Sobic001G065100--Sobic001G493700 Sobic001G065100--Sobic008G088872 Sobic001G065100--Sobic004G322400 Sobic005G062200 Sobic005G062200 Sobic001G065100--Sobic005G062200 Sobic003G296900 Sobic003G296900 Sobic001G065100--Sobic003G296900 Sobic003G155100 Sobic003G155100 Sobic008G001200--Sobic003G155100 Sobic008G001200--Sobic010G206900 Sobic008G001200--Sobic009G256400 Sobic008G001200--Sobic003G205200 Sobic008G001200--Sobic010G010700 Sobic008G001200--Sobic001G194200 Sobic008G001200--Sobic005G001000 Sobic008G001200--Sobic004G276400 Sobic004G174200 Sobic004G174200 Sobic008G001200--Sobic004G174200
Octagon: transcription factors


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