Gene annotation
Transcriptome id Sobic.003G253600.1
Synonym Sb03g030890
Functional annotation protein kinase domain containing protein, expressed
UniProt C5XG37 , C6JSQ0
Pfam PF14381 PF07714
Panther DB PTHR23257 PTHR23257:SF457
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G58640 : Mitogen activated protein kinase kinase kinase-related
RAP-DB (Rice) LOC_Os01g48330.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a028079 , Zm00025a038800
Brachypodium KQK09154 , KQK09155
Barley HORVU3Hr1G061860.2 , HORVU3Hr1G061860.3 , HORVU3Hr1G061860.1 , HORVU3Hr1G061860.4
Wheat TraesCS3A02G271100 , TraesCS3B02G304900 , TraesCS3D02G270900 , TraesCS3D02G270900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G185100 ranBP1 domain containing protein, expressed K14295: NUP50, nuclear pore complex protein Nup50
2 Sobic.002G257750 - -
3 Sobic.003G119600 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.002G344000 expressed protein -
5 Sobic.001G332500 WRKY81, expressed -
6 Sobic.003G316500 expressed protein -
7 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
8 Sobic.005G059800 RNA recognition motif containing protein, putative, expressed K14407: CSTF2, cleavage stimulation factor subunit 2
9 Sobic.008G044100 expressed protein -
10 Sobic.004G193700 ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
11 Sobic.003G176000 lipase family protein, putative, expressed -
12 Sobic.005G106600 CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
13 Sobic.003G389200 Rad21 / Rec8 like protein, putative, expressed K06670: SCC1, MCD1, cohesin complex subunit SCC1
14 Sobic.004G258700 PHD-finger family protein, expressed -
15 Sobic.007G061000 mitotic checkpoint protein, putative, expressed K14298: RAE1, mRNA export factor
16 Sobic.001G455600 cysteine synthase, putative, expressed K01738: cysteine synthase
17 Sobic.003G398700 expressed protein K15210: snRNA-activating protein complex subunit 3
18 Sobic.001G230000 expressed protein K10779: transcriptional regulator ATRX
19 Sobic.004G146600 lipase, putative, expressed -
20 Sobic.001G392300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12820: DHX15, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43


Gene co-expression network
sample Sobic003G253600 Sobic003G253600 Sobic006G185100 Sobic006G185100 Sobic003G253600--Sobic006G185100 Sobic002G257750 Sobic002G257750 Sobic003G253600--Sobic002G257750 Sobic003G119600 Sobic003G119600 Sobic003G253600--Sobic003G119600 Sobic002G344000 Sobic002G344000 Sobic003G253600--Sobic002G344000 Sobic001G332500 Sobic001G332500 Sobic003G253600--Sobic001G332500 Sobic003G316500 Sobic003G316500 Sobic003G253600--Sobic003G316500 Sobic003G155100 Sobic003G155100 Sobic003G253600--Sobic003G155100 Sobic005G059800 Sobic005G059800 Sobic003G253600--Sobic005G059800 Sobic008G044100 Sobic008G044100 Sobic003G253600--Sobic008G044100 Sobic002G325300 Sobic002G325300 Sobic006G185100--Sobic002G325300 Sobic006G185100--Sobic003G253600 Sobic006G185100--Sobic002G257750 Sobic004G140600 Sobic004G140600 Sobic006G185100--Sobic004G140600 Sobic001G392300 Sobic001G392300 Sobic006G185100--Sobic001G392300 Sobic006G185100--Sobic005G059800 Sobic006G185100--Sobic003G119600 Sobic001G080700 Sobic001G080700 Sobic006G185100--Sobic001G080700 Sobic008G070800 Sobic008G070800 Sobic006G185100--Sobic008G070800 Sobic003G398700 Sobic003G398700 Sobic002G257750--Sobic003G398700 Sobic005G106600 Sobic005G106600 Sobic002G257750--Sobic005G106600 Sobic002G257750--Sobic003G119600 Sobic002G257750--Sobic003G253600 Sobic002G257750--Sobic006G185100 Sobic003G388100 Sobic003G388100 Sobic002G257750--Sobic003G388100 Sobic006G050700 Sobic006G050700 Sobic002G257750--Sobic006G050700 Sobic004G244900 Sobic004G244900 Sobic002G257750--Sobic004G244900 Sobic010G132600 Sobic010G132600 Sobic002G257750--Sobic010G132600 Sobic009G201300 Sobic009G201300 Sobic003G119600--Sobic009G201300 Sobic001G439300 Sobic001G439300 Sobic003G119600--Sobic001G439300 Sobic003G119600--Sobic002G325300 Sobic003G119600--Sobic004G244900 Sobic003G119600--Sobic002G257750 Sobic003G119600--Sobic005G106600 Sobic004G356700 Sobic004G356700 Sobic003G119600--Sobic004G356700 Sobic003G119600--Sobic003G253600 Sobic003G354600 Sobic003G354600 Sobic003G119600--Sobic003G354600 Sobic005G100700 Sobic005G100700 Sobic002G344000--Sobic005G100700 Sobic002G344000--Sobic008G044100 Sobic003G360400 Sobic003G360400 Sobic002G344000--Sobic003G360400 Sobic002G211800 Sobic002G211800 Sobic002G344000--Sobic002G211800 Sobic001G230000 Sobic001G230000 Sobic002G344000--Sobic001G230000 Sobic008G113100 Sobic008G113100 Sobic002G344000--Sobic008G113100 Sobic002G344000--Sobic003G398700 Sobic001G354600 Sobic001G354600 Sobic002G344000--Sobic001G354600 Sobic010G206900 Sobic010G206900 Sobic002G344000--Sobic010G206900 Sobic001G332500--Sobic001G080700 Sobic001G122832 Sobic001G122832 Sobic001G332500--Sobic001G122832 Sobic001G332500--Sobic003G253600 Sobic001G375700 Sobic001G375700 Sobic001G332500--Sobic001G375700 Sobic001G332500--Sobic001G392300 Sobic003G221900 Sobic003G221900 Sobic001G332500--Sobic003G221900 Sobic007G136800 Sobic007G136800 Sobic001G332500--Sobic007G136800 Sobic001G332500--Sobic003G398700 Sobic001G332500--Sobic006G185100 Sobic001G534700 Sobic001G534700 Sobic003G316500--Sobic001G534700 Sobic009G053900 Sobic009G053900 Sobic003G316500--Sobic009G053900 Sobic009G074400 Sobic009G074400 Sobic003G316500--Sobic009G074400 Sobic001G389100 Sobic001G389100 Sobic003G316500--Sobic001G389100 Sobic010G147100 Sobic010G147100 Sobic003G316500--Sobic010G147100 Sobic001G365900 Sobic001G365900 Sobic003G316500--Sobic001G365900 Sobic009G165700 Sobic009G165700 Sobic003G316500--Sobic009G165700 Sobic001G451400 Sobic001G451400 Sobic003G316500--Sobic001G451400 Sobic003G316500--Sobic010G206900 Sobic008G001200 Sobic008G001200 Sobic003G155100--Sobic008G001200 Sobic006G219600 Sobic006G219600 Sobic003G155100--Sobic006G219600 Sobic003G155100--Sobic010G206900 Sobic003G155100--Sobic001G230000 Sobic001G375100 Sobic001G375100 Sobic003G155100--Sobic001G375100 Sobic001G194200 Sobic001G194200 Sobic003G155100--Sobic001G194200 Sobic010G010700 Sobic010G010700 Sobic003G155100--Sobic010G010700 Sobic009G256400 Sobic009G256400 Sobic003G155100--Sobic009G256400 Sobic004G291900 Sobic004G291900 Sobic003G155100--Sobic004G291900 Sobic010G032900 Sobic010G032900 Sobic005G059800--Sobic010G032900 Sobic002G294800 Sobic002G294800 Sobic005G059800--Sobic002G294800 Sobic005G059800--Sobic006G185100 Sobic005G059800--Sobic001G194200 Sobic005G059800--Sobic003G155100 Sobic003G011300 Sobic003G011300 Sobic005G059800--Sobic003G011300 Sobic005G059800--Sobic008G044100 Sobic005G059800--Sobic008G070800 Sobic005G059800--Sobic003G398700 Sobic008G044100--Sobic010G010700 Sobic004G134200 Sobic004G134200 Sobic008G044100--Sobic004G134200 Sobic001G374100 Sobic001G374100 Sobic008G044100--Sobic001G374100 Sobic008G044100--Sobic003G155100 Sobic008G044100--Sobic010G206900 Sobic008G044100--Sobic001G230000 Sobic008G044100--Sobic008G001200 Sobic003G389200 Sobic003G389200 Sobic008G044100--Sobic003G389200 Sobic002G316600 Sobic002G316600 Sobic008G044100--Sobic002G316600
Octagon: transcription factors


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