Gene annotation
Transcriptome id Sobic.003G176000.1,Sobic.003G176000.2
Synonym
Functional annotation lipase family protein, putative, expressed
UniProt A0A1B6Q3X9 , A0A1B6Q3Z4
Pfam PF04083
Panther DB PTHR11005 PTHR11005:SF17
NCBI CDD KOG2624; Triglyceride lipase-cholesterol esterase
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT1G73920 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g33784.1 : lipase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a024819
Brachypodium KQK04505 , KQK04506 , KQK04507
Barley HORVU3Hr1G042290.10 , HORVU3Hr1G042290.11 , HORVU3Hr1G042290.8 , HORVU3Hr1G042290.9 , HORVU3Hr1G042290.6 , HORVU3Hr1G042290.7 , HORVU3Hr1G042290.4 , HORVU3Hr1G042290.5 , HORVU3Hr1G042290.2 , HORVU3Hr1G042290.3 , HORVU3Hr1G042290.1
Wheat TraesCS3A02G193700 , TraesCS3B02G222800 , TraesCS3D02G197500 , TraesCS3D02G197500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G131800 sirohydrochlorin ferrochelatase, putative, expressed -
2 Sobic.002G344000 expressed protein -
3 Sobic.002G211800 AT-rich interaction region, putative, expressed -
4 Sobic.002G170200 zinc finger family protein, putative, expressed -
5 Sobic.010G032900 transketolase, putative, expressed K01662: 1-deoxy-D-xylulose-5-phosphate synthase
6 Sobic.003G253600 protein kinase domain containing protein, expressed -
7 Sobic.002G325300 acyltransferase, putative, expressed K13506: GPAT3_4, AGPAT9, glycerol-3-phosphate O-acyltransferase 3/4
8 Sobic.002G294800 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
9 Sobic.005G059800 RNA recognition motif containing protein, putative, expressed K14407: CSTF2, cleavage stimulation factor subunit 2
10 Sobic.006G127600 signal peptide peptidase-like 2B, putative, expressed K09597: signal peptide peptidase-like 2B
11 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
12 Sobic.003G398700 expressed protein K15210: snRNA-activating protein complex subunit 3
13 Sobic.008G047300 Trihelix Family(PubMedID : 24864043)@homeodomain, putative, expressed -
14 Sobic.001G193300 TBC domain containing protein, expressed -
15 Sobic.003G355900 prenylated rab acceptor, putative, expressed -
16 Sobic.008G088806 - K16280: E3 ubiquitin-protein ligase RGLG
17 Sobic.003G196300 DNA binding protein, putative, expressed -
18 Sobic.009G132700 - -
19 Sobic.008G089100 armadillo/beta-catenin repeat family protein, putative, expressed -
20 Sobic.001G002000 protein kinase domain containing protein, expressed -


Gene co-expression network
sample Sobic003G176000 Sobic003G176000 Sobic004G131800 Sobic004G131800 Sobic003G176000--Sobic004G131800 Sobic002G344000 Sobic002G344000 Sobic003G176000--Sobic002G344000 Sobic002G211800 Sobic002G211800 Sobic003G176000--Sobic002G211800 Sobic002G170200 Sobic002G170200 Sobic003G176000--Sobic002G170200 Sobic010G032900 Sobic010G032900 Sobic003G176000--Sobic010G032900 Sobic003G253600 Sobic003G253600 Sobic003G176000--Sobic003G253600 Sobic002G325300 Sobic002G325300 Sobic003G176000--Sobic002G325300 Sobic002G294800 Sobic002G294800 Sobic003G176000--Sobic002G294800 Sobic005G059800 Sobic005G059800 Sobic003G176000--Sobic005G059800 Sobic004G131800--Sobic003G176000 Sobic004G131800--Sobic002G211800 Sobic004G131800--Sobic002G170200 Sobic006G127600 Sobic006G127600 Sobic004G131800--Sobic006G127600 Sobic004G131800--Sobic010G032900 Sobic004G131800--Sobic002G344000 Sobic006G056700 Sobic006G056700 Sobic004G131800--Sobic006G056700 Sobic001G178300 Sobic001G178300 Sobic004G131800--Sobic001G178300 Sobic004G131800--Sobic002G294800 Sobic005G100700 Sobic005G100700 Sobic002G344000--Sobic005G100700 Sobic008G044100 Sobic008G044100 Sobic002G344000--Sobic008G044100 Sobic003G360400 Sobic003G360400 Sobic002G344000--Sobic003G360400 Sobic002G344000--Sobic002G211800 Sobic001G230000 Sobic001G230000 Sobic002G344000--Sobic001G230000 Sobic008G113100 Sobic008G113100 Sobic002G344000--Sobic008G113100 Sobic003G398700 Sobic003G398700 Sobic002G344000--Sobic003G398700 Sobic001G354600 Sobic001G354600 Sobic002G344000--Sobic001G354600 Sobic010G206900 Sobic010G206900 Sobic002G344000--Sobic010G206900 Sobic009G165700 Sobic009G165700 Sobic002G211800--Sobic009G165700 Sobic007G031900 Sobic007G031900 Sobic002G211800--Sobic007G031900 Sobic002G211800--Sobic002G344000 Sobic003G166750 Sobic003G166750 Sobic002G211800--Sobic003G166750 Sobic004G023000 Sobic004G023000 Sobic002G211800--Sobic004G023000 Sobic009G132700 Sobic009G132700 Sobic002G211800--Sobic009G132700 Sobic003G170900 Sobic003G170900 Sobic002G211800--Sobic003G170900 Sobic002G211800--Sobic002G294800 Sobic003G362600 Sobic003G362600 Sobic002G211800--Sobic003G362600 Sobic002G170200--Sobic004G131800 Sobic001G283600 Sobic001G283600 Sobic002G170200--Sobic001G283600 Sobic002G170200--Sobic003G176000 Sobic005G198000 Sobic005G198000 Sobic002G170200--Sobic005G198000 Sobic002G170200--Sobic006G056700 Sobic002G170200--Sobic006G127600 Sobic006G039400 Sobic006G039400 Sobic002G170200--Sobic006G039400 Sobic007G162100 Sobic007G162100 Sobic002G170200--Sobic007G162100 Sobic006G261400 Sobic006G261400 Sobic002G170200--Sobic006G261400 Sobic010G032900--Sobic005G059800 Sobic010G139000 Sobic010G139000 Sobic010G032900--Sobic010G139000 Sobic010G032900--Sobic003G170900 Sobic001G194200 Sobic001G194200 Sobic010G032900--Sobic001G194200 Sobic001G002000 Sobic001G002000 Sobic010G032900--Sobic001G002000 Sobic003G011300 Sobic003G011300 Sobic010G032900--Sobic003G011300 Sobic004G291900 Sobic004G291900 Sobic010G032900--Sobic004G291900 Sobic010G032900--Sobic002G294800 Sobic002G134200 Sobic002G134200 Sobic010G032900--Sobic002G134200 Sobic006G185100 Sobic006G185100 Sobic003G253600--Sobic006G185100 Sobic002G257750 Sobic002G257750 Sobic003G253600--Sobic002G257750 Sobic003G119600 Sobic003G119600 Sobic003G253600--Sobic003G119600 Sobic003G253600--Sobic002G344000 Sobic001G332500 Sobic001G332500 Sobic003G253600--Sobic001G332500 Sobic003G316500 Sobic003G316500 Sobic003G253600--Sobic003G316500 Sobic003G155100 Sobic003G155100 Sobic003G253600--Sobic003G155100 Sobic003G253600--Sobic005G059800 Sobic003G253600--Sobic008G044100 Sobic002G325300--Sobic006G185100 Sobic002G325300--Sobic001G194200 Sobic006G252900 Sobic006G252900 Sobic002G325300--Sobic006G252900 Sobic003G247500 Sobic003G247500 Sobic002G325300--Sobic003G247500 Sobic002G325300--Sobic003G119600 Sobic006G041600 Sobic006G041600 Sobic002G325300--Sobic006G041600 Sobic008G001200 Sobic008G001200 Sobic002G325300--Sobic008G001200 Sobic004G244900 Sobic004G244900 Sobic002G325300--Sobic004G244900 Sobic009G256400 Sobic009G256400 Sobic002G325300--Sobic009G256400 Sobic005G027400 Sobic005G027400 Sobic002G294800--Sobic005G027400 Sobic001G241100 Sobic001G241100 Sobic002G294800--Sobic001G241100 Sobic003G355900 Sobic003G355900 Sobic002G294800--Sobic003G355900 Sobic002G294800--Sobic002G211800 Sobic002G294800--Sobic005G059800 Sobic001G261501 Sobic001G261501 Sobic002G294800--Sobic001G261501 Sobic002G294800--Sobic010G032900 Sobic001G389100 Sobic001G389100 Sobic002G294800--Sobic001G389100 Sobic010G013200 Sobic010G013200 Sobic002G294800--Sobic010G013200 Sobic005G059800--Sobic010G032900 Sobic005G059800--Sobic002G294800 Sobic005G059800--Sobic006G185100 Sobic005G059800--Sobic001G194200 Sobic005G059800--Sobic003G155100 Sobic005G059800--Sobic003G011300 Sobic005G059800--Sobic008G044100 Sobic008G070800 Sobic008G070800 Sobic005G059800--Sobic008G070800 Sobic005G059800--Sobic003G398700
Octagon: transcription factors


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