Gene annotation
Transcriptome id Sobic.006G127600.2
Synonym Sb06g020770, ATSPPL3, SPPL3
Functional annotation signal peptide peptidase-like 2B, putative, expressed
UniProt A0A1Z5RE08
Pfam PF02225 PF04258
Panther DB PTHR12174 PTHR12174:SF36
NCBI CDD -
KEGG Orthology K09597; signal peptide peptidase-like 2B
Gene Ontology GO:0016021; integral component of membrane GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT2G43070 : SIGNAL PEPTIDE PEPTIDASE-LIKE 3
RAP-DB (Rice) LOC_Os11g24540.1 : signal peptide peptidase-like 2B, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK07589 , KQK07588
Barley HORVU7Hr1G000380.10 , HORVU7Hr1G000380.11 , HORVU7Hr1G000380.2 , HORVU7Hr1G000380.3 , HORVU7Hr1G000380.1 , HORVU7Hr1G000380.6 , HORVU7Hr1G000380.7 , HORVU7Hr1G000380.4 , HORVU7Hr1G000380.5 , HORVU7Hr1G000380.8 , HORVU7Hr1G000380.9
Wheat TraesCS7A02G003200 , TraesCS7A02G003000 , TraesCS4A02G495600 , TraesCS4A02G495600
Populus -


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cDNA sequences
Sobic.006G127600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G162100 TENA/THI-4 family protein, putative, expressed -
2 Sobic.006G261400 peptidase, trypsin-like serine and cysteine proteases, putative, expressed -
3 Sobic.008G157200 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
4 Sobic.009G256900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.010G000800 PHD-finger domain containing protein, expressed -
6 Sobic.001G251100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
7 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
8 Sobic.003G379200 wound-responsive family protein, putative, expressed -
9 Sobic.006G131000 expressed protein K11968: ariadne-1
10 Sobic.001G493700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed -
11 Sobic.001G227400 WD domain, G-beta repeat domain containing protein, expressed -
12 Sobic.004G322400 WD40-like, putative, expressed -
13 Sobic.002G020700 WD domain, G-beta repeat domain containing protein, expressed K14018: PLAA, DOA1, phospholipase A-2-activating protein
14 Sobic.001G283600 NTMC2Type1.2 protein, putative, expressed -
15 Sobic.003G264100 - K10843: ERCC3, DNA excision repair protein ERCC-3
16 Sobic.006G280000 transportin-2, putative, expressed K18752: TNPO1, IPO2, transportin-1
17 Sobic.008G033500 nucleolar GTPase, putative, expressed -
18 Sobic.009G084900 expressed protein -
19 Sobic.001G065100 cullin, putative, expressed K10609: cullin 4
20 Sobic.004G131800 sirohydrochlorin ferrochelatase, putative, expressed -


Gene co-expression network
sample Sobic006G127600 Sobic006G127600 Sobic007G162100 Sobic007G162100 Sobic006G127600--Sobic007G162100 Sobic006G261400 Sobic006G261400 Sobic006G127600--Sobic006G261400 Sobic008G157200 Sobic008G157200 Sobic006G127600--Sobic008G157200 Sobic009G256900 Sobic009G256900 Sobic006G127600--Sobic009G256900 Sobic010G000800 Sobic010G000800 Sobic006G127600--Sobic010G000800 Sobic001G251100 Sobic001G251100 Sobic006G127600--Sobic001G251100 Sobic001G333100 Sobic001G333100 Sobic006G127600--Sobic001G333100 Sobic003G379200 Sobic003G379200 Sobic006G127600--Sobic003G379200 Sobic006G131000 Sobic006G131000 Sobic006G127600--Sobic006G131000 Sobic007G162100--Sobic006G127600 Sobic001G283600 Sobic001G283600 Sobic007G162100--Sobic001G283600 Sobic009G084900 Sobic009G084900 Sobic007G162100--Sobic009G084900 Sobic001G435400 Sobic001G435400 Sobic007G162100--Sobic001G435400 Sobic003G189600 Sobic003G189600 Sobic007G162100--Sobic003G189600 Sobic010G020400 Sobic010G020400 Sobic007G162100--Sobic010G020400 Sobic003G264100 Sobic003G264100 Sobic007G162100--Sobic003G264100 Sobic007G132100 Sobic007G132100 Sobic007G162100--Sobic007G132100 Sobic009G192300 Sobic009G192300 Sobic007G162100--Sobic009G192300 Sobic006G261400--Sobic003G379200 Sobic006G261400--Sobic006G127600 Sobic006G267600 Sobic006G267600 Sobic006G261400--Sobic006G267600 Sobic003G104000 Sobic003G104000 Sobic006G261400--Sobic003G104000 Sobic006G261400--Sobic010G000800 Sobic002G048700 Sobic002G048700 Sobic006G261400--Sobic002G048700 Sobic001G051700 Sobic001G051700 Sobic006G261400--Sobic001G051700 Sobic004G131300 Sobic004G131300 Sobic006G261400--Sobic004G131300 Sobic003G296900 Sobic003G296900 Sobic006G261400--Sobic003G296900 Sobic006G073200 Sobic006G073200 Sobic008G157200--Sobic006G073200 Sobic008G157200--Sobic006G127600 Sobic008G157200--Sobic004G131300 Sobic008G157200--Sobic009G084900 Sobic003G314700 Sobic003G314700 Sobic008G157200--Sobic003G314700 Sobic008G157200--Sobic007G162100 Sobic003G405500 Sobic003G405500 Sobic008G157200--Sobic003G405500 Sobic001G248100 Sobic001G248100 Sobic008G157200--Sobic001G248100 Sobic001G404600 Sobic001G404600 Sobic008G157200--Sobic001G404600 Sobic001G493700 Sobic001G493700 Sobic009G256900--Sobic001G493700 Sobic002G133300 Sobic002G133300 Sobic009G256900--Sobic002G133300 Sobic003G441900 Sobic003G441900 Sobic009G256900--Sobic003G441900 Sobic009G256900--Sobic006G127600 Sobic001G002000 Sobic001G002000 Sobic009G256900--Sobic001G002000 Sobic003G095900 Sobic003G095900 Sobic009G256900--Sobic003G095900 Sobic003G221400 Sobic003G221400 Sobic009G256900--Sobic003G221400 Sobic001G089600 Sobic001G089600 Sobic009G256900--Sobic001G089600 Sobic006G184900 Sobic006G184900 Sobic009G256900--Sobic006G184900 Sobic004G265500 Sobic004G265500 Sobic010G000800--Sobic004G265500 Sobic004G322400 Sobic004G322400 Sobic010G000800--Sobic004G322400 Sobic003G163200 Sobic003G163200 Sobic010G000800--Sobic003G163200 Sobic010G000800--Sobic003G379200 Sobic010G000800--Sobic003G189600 Sobic002G179400 Sobic002G179400 Sobic010G000800--Sobic002G179400 Sobic006G077200 Sobic006G077200 Sobic010G000800--Sobic006G077200 Sobic010G000800--Sobic006G261400 Sobic002G429300 Sobic002G429300 Sobic010G000800--Sobic002G429300 Sobic001G251100--Sobic003G104000 Sobic002G256700 Sobic002G256700 Sobic001G251100--Sobic002G256700 Sobic001G251100--Sobic004G131300 Sobic001G251100--Sobic002G133300 Sobic003G293300 Sobic003G293300 Sobic001G251100--Sobic003G293300 Sobic007G054800 Sobic007G054800 Sobic001G251100--Sobic007G054800 Sobic001G251100--Sobic001G493700 Sobic004G257100 Sobic004G257100 Sobic001G251100--Sobic004G257100 Sobic001G251100--Sobic003G379200 Sobic001G333100--Sobic003G264100 Sobic002G020700 Sobic002G020700 Sobic001G333100--Sobic002G020700 Sobic001G333100--Sobic003G221400 Sobic001G192000 Sobic001G192000 Sobic001G333100--Sobic001G192000 Sobic001G333100--Sobic010G020400 Sobic002G142900 Sobic002G142900 Sobic001G333100--Sobic002G142900 Sobic010G223300 Sobic010G223300 Sobic001G333100--Sobic010G223300 Sobic001G333100--Sobic001G251100 Sobic008G033500 Sobic008G033500 Sobic001G333100--Sobic008G033500 Sobic003G379200--Sobic006G261400 Sobic009G044800 Sobic009G044800 Sobic003G379200--Sobic009G044800 Sobic006G088200 Sobic006G088200 Sobic003G379200--Sobic006G088200 Sobic003G360400 Sobic003G360400 Sobic003G379200--Sobic003G360400 Sobic008G083200 Sobic008G083200 Sobic003G379200--Sobic008G083200 Sobic003G379200--Sobic010G000800 Sobic001G354600 Sobic001G354600 Sobic003G379200--Sobic001G354600 Sobic003G363700 Sobic003G363700 Sobic003G379200--Sobic003G363700 Sobic006G174850 Sobic006G174850 Sobic003G379200--Sobic006G174850 Sobic007G218000 Sobic007G218000 Sobic006G131000--Sobic007G218000 Sobic006G131000--Sobic007G132100 Sobic006G163800 Sobic006G163800 Sobic006G131000--Sobic006G163800 Sobic004G039600 Sobic004G039600 Sobic006G131000--Sobic004G039600 Sobic001G096000 Sobic001G096000 Sobic006G131000--Sobic001G096000 Sobic006G131000--Sobic006G174850 Sobic010G275500 Sobic010G275500 Sobic006G131000--Sobic010G275500 Sobic001G369000 Sobic001G369000 Sobic006G131000--Sobic001G369000 Sobic004G178200 Sobic004G178200 Sobic006G131000--Sobic004G178200
Octagon: transcription factors


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