Gene annotation
Transcriptome id Sobic.010G000800.2
Synonym
Functional annotation PHD-finger domain containing protein, expressed
UniProt A0A194YGI6
Pfam PF16135
Panther DB PTHR24098 PTHR24098:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G27980 : Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain
RAP-DB (Rice) LOC_Os06g01170.1 : PHD-finger domain containing protein, expressed
MaizeGDB (Corn) Zm00025a041144 , Zm00025a050357
Brachypodium KQK20091
Barley -
Wheat TraesCS7A02G002000 , TraesCS7A02G002000 , TraesCS4A02G498600 , TraesCS4A02G498600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G265500 SET domain protein SDG117, putative, expressed -
2 Sobic.004G322400 WD40-like, putative, expressed -
3 Sobic.003G163200 expressed protein K11654: SMARCA5, SNF2H, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
4 Sobic.003G379200 wound-responsive family protein, putative, expressed -
5 Sobic.003G189600 M16 domain containing zinc peptidase, putative, expressed -
6 Sobic.002G179400 DNA binding protein, putative, expressed -
7 Sobic.006G077200 ubiquitin interaction motif-containing protein, putative, expressed -
8 Sobic.006G261400 peptidase, trypsin-like serine and cysteine proteases, putative, expressed -
9 Sobic.002G429300 importin subunit beta, putative, expressed -
10 Sobic.002G401500 WD domain, G-beta repeat domain containing protein, expressed K14005: protein transport protein SEC31
11 Sobic.006G021700 expressed protein K17600: vacuolar protein sorting-associated protein 54
12 Sobic.004G053500 HEAT repeat family protein, putative, expressed K17263: CAND1, cullin-associated NEDD8-dissociated protein 1
13 Sobic.001G248100 histone acetyltransferase GCN5, putative, expressed K06062: PCAF, KAT2, histone acetyltransferase
14 Sobic.001G090100 SRPK4, putative, expressed K08832: SRPK3, serine/threonine-protein kinase SRPK3
15 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
16 Sobic.007G005500 ECT protein, putative, expressed -
17 Sobic.003G296900 expressed protein -
18 Sobic.004G096400 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
19 Sobic.005G110499 - K14006: protein transport protein SEC23
20 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -


Gene co-expression network
sample Sobic010G000800 Sobic010G000800 Sobic004G265500 Sobic004G265500 Sobic010G000800--Sobic004G265500 Sobic004G322400 Sobic004G322400 Sobic010G000800--Sobic004G322400 Sobic003G163200 Sobic003G163200 Sobic010G000800--Sobic003G163200 Sobic003G379200 Sobic003G379200 Sobic010G000800--Sobic003G379200 Sobic003G189600 Sobic003G189600 Sobic010G000800--Sobic003G189600 Sobic002G179400 Sobic002G179400 Sobic010G000800--Sobic002G179400 Sobic006G077200 Sobic006G077200 Sobic010G000800--Sobic006G077200 Sobic006G261400 Sobic006G261400 Sobic010G000800--Sobic006G261400 Sobic002G429300 Sobic002G429300 Sobic010G000800--Sobic002G429300 Sobic003G043000 Sobic003G043000 Sobic004G265500--Sobic003G043000 Sobic004G265500--Sobic003G163200 Sobic001G308400 Sobic001G308400 Sobic004G265500--Sobic001G308400 Sobic004G357100 Sobic004G357100 Sobic004G265500--Sobic004G357100 Sobic004G265500--Sobic010G000800 Sobic002G042600 Sobic002G042600 Sobic004G265500--Sobic002G042600 Sobic004G053500 Sobic004G053500 Sobic004G265500--Sobic004G053500 SobicK028600 SobicK028600 Sobic004G265500--SobicK028600 Sobic002G227500 Sobic002G227500 Sobic004G265500--Sobic002G227500 Sobic002G401500 Sobic002G401500 Sobic004G322400--Sobic002G401500 Sobic004G322400--Sobic002G042600 Sobic009G131300 Sobic009G131300 Sobic004G322400--Sobic009G131300 Sobic010G223100 Sobic010G223100 Sobic004G322400--Sobic010G223100 Sobic008G124800 Sobic008G124800 Sobic004G322400--Sobic008G124800 Sobic004G322400--Sobic002G179400 Sobic010G059500 Sobic010G059500 Sobic004G322400--Sobic010G059500 Sobic001G065100 Sobic001G065100 Sobic004G322400--Sobic001G065100 Sobic010G275500 Sobic010G275500 Sobic004G322400--Sobic010G275500 Sobic003G163200--Sobic004G265500 Sobic003G163200--Sobic002G042600 Sobic003G163200--Sobic010G000800 Sobic003G163200--Sobic003G043000 Sobic003G163200--Sobic002G179400 Sobic003G163200--Sobic010G223100 Sobic003G163200--Sobic002G429300 Sobic006G184900 Sobic006G184900 Sobic003G163200--Sobic006G184900 Sobic004G204100 Sobic004G204100 Sobic003G163200--Sobic004G204100 Sobic003G379200--Sobic006G261400 Sobic009G044800 Sobic009G044800 Sobic003G379200--Sobic009G044800 Sobic006G088200 Sobic006G088200 Sobic003G379200--Sobic006G088200 Sobic003G360400 Sobic003G360400 Sobic003G379200--Sobic003G360400 Sobic008G083200 Sobic008G083200 Sobic003G379200--Sobic008G083200 Sobic003G379200--Sobic010G000800 Sobic001G354600 Sobic001G354600 Sobic003G379200--Sobic001G354600 Sobic003G363700 Sobic003G363700 Sobic003G379200--Sobic003G363700 Sobic006G174850 Sobic006G174850 Sobic003G379200--Sobic006G174850 Sobic005G110499 Sobic005G110499 Sobic003G189600--Sobic005G110499 Sobic010G185400 Sobic010G185400 Sobic003G189600--Sobic010G185400 Sobic007G218000 Sobic007G218000 Sobic003G189600--Sobic007G218000 Sobic003G189600--Sobic006G077200 Sobic003G394200 Sobic003G394200 Sobic003G189600--Sobic003G394200 Sobic006G224800 Sobic006G224800 Sobic003G189600--Sobic006G224800 Sobic009G249700 Sobic009G249700 Sobic003G189600--Sobic009G249700 Sobic003G189600--Sobic001G308400 Sobic003G189600--Sobic004G322400 Sobic001G493700 Sobic001G493700 Sobic002G179400--Sobic001G493700 Sobic002G179400--Sobic002G042600 Sobic002G179400--Sobic004G053500 Sobic002G179400--Sobic002G429300 Sobic002G179400--Sobic006G184900 Sobic003G233400 Sobic003G233400 Sobic002G179400--Sobic003G233400 Sobic002G133300 Sobic002G133300 Sobic002G179400--Sobic002G133300 Sobic002G179400--Sobic001G065100 Sobic002G179400--Sobic004G322400 Sobic009G084900 Sobic009G084900 Sobic006G077200--Sobic009G084900 Sobic006G077200--Sobic010G185400 Sobic006G077200--Sobic010G059500 Sobic001G145400 Sobic001G145400 Sobic006G077200--Sobic001G145400 Sobic001G493200 Sobic001G493200 Sobic006G077200--Sobic001G493200 Sobic003G249600 Sobic003G249600 Sobic006G077200--Sobic003G249600 Sobic008G082500 Sobic008G082500 Sobic006G077200--Sobic008G082500 Sobic006G077200--Sobic003G189600 Sobic004G096400 Sobic004G096400 Sobic006G077200--Sobic004G096400 Sobic006G261400--Sobic003G379200 Sobic006G127600 Sobic006G127600 Sobic006G261400--Sobic006G127600 Sobic006G267600 Sobic006G267600 Sobic006G261400--Sobic006G267600 Sobic003G104000 Sobic003G104000 Sobic006G261400--Sobic003G104000 Sobic006G261400--Sobic010G000800 Sobic002G048700 Sobic002G048700 Sobic006G261400--Sobic002G048700 Sobic001G051700 Sobic001G051700 Sobic006G261400--Sobic001G051700 Sobic004G131300 Sobic004G131300 Sobic006G261400--Sobic004G131300 Sobic003G296900 Sobic003G296900 Sobic006G261400--Sobic003G296900 Sobic002G429300--Sobic009G131300 Sobic005G162500 Sobic005G162500 Sobic002G429300--Sobic005G162500 Sobic002G429300--Sobic006G184900 Sobic001G263600 Sobic001G263600 Sobic002G429300--Sobic001G263600 Sobic002G429300--Sobic002G042600 Sobic008G098900 Sobic008G098900 Sobic002G429300--Sobic008G098900 Sobic002G429300--Sobic001G493700 Sobic002G335600 Sobic002G335600 Sobic002G429300--Sobic002G335600 Sobic008G088872 Sobic008G088872 Sobic002G429300--Sobic008G088872
Octagon: transcription factors


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