Gene annotation
Transcriptome id Sobic.002G429300.1
Synonym Sb02g043920
Functional annotation importin subunit beta, putative, expressed
UniProt A0A1B6QGH8
Pfam PF03810
Panther DB PTHR10997 PTHR10997:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008536; Ran GTPase binding GO:0006886intracellular protein transport


Orthologs (automatic annotation)
TAIR AT3G08960 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os07g49260.1 : importin subunit beta, putative, expressed
MaizeGDB (Corn) Zm00025a015512
Brachypodium KQK14492
Barley -
Wheat TraesCS2D02G085100 , TraesCS2D02G085100 , TraesCS2B02G102500 , TraesCS2B02G102500 , TraesCS2A02G088000 , TraesCS2A02G088000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G131300 cation-transporting ATPase, putative, expressed K14950: ATP13A1, manganese-transporting P-type ATPase
2 Sobic.005G162500 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
3 Sobic.006G184900 tetratricopeptide repeat domain containing protein, expressed K15176: RNA polymerase-associated protein CTR9
4 Sobic.001G263600 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
5 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
6 Sobic.008G098900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
7 Sobic.001G493700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed -
8 Sobic.002G335600 eukaryotic translation initiation factor 4G, putative, expressed K03260: translation initiation factor 4G
9 Sobic.008G088872 - -
10 Sobic.001G370900 expressed protein K11665: INO80, DNA helicase INO80
11 Sobic.003G072200 zinc finger protein, putative, expressed K11978: E3 ubiquitin-protein ligase UBR3
12 Sobic.002G179400 DNA binding protein, putative, expressed -
13 Sobic.002G401500 WD domain, G-beta repeat domain containing protein, expressed K14005: protein transport protein SEC31
14 Sobic.009G084900 expressed protein -
15 Sobic.004G322400 WD40-like, putative, expressed -
16 Sobic.005G062200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
17 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11
18 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
19 Sobic.003G312100 guanine nucleotide exchange family protein, putative, expressed -
20 Sobic.007G054800 valyl-tRNA synthetase, putative, expressed K01873: VARS, valyl-tRNA synthetase


Gene co-expression network
sample Sobic002G429300 Sobic002G429300 Sobic009G131300 Sobic009G131300 Sobic002G429300--Sobic009G131300 Sobic005G162500 Sobic005G162500 Sobic002G429300--Sobic005G162500 Sobic006G184900 Sobic006G184900 Sobic002G429300--Sobic006G184900 Sobic001G263600 Sobic001G263600 Sobic002G429300--Sobic001G263600 Sobic002G042600 Sobic002G042600 Sobic002G429300--Sobic002G042600 Sobic008G098900 Sobic008G098900 Sobic002G429300--Sobic008G098900 Sobic001G493700 Sobic001G493700 Sobic002G429300--Sobic001G493700 Sobic002G335600 Sobic002G335600 Sobic002G429300--Sobic002G335600 Sobic008G088872 Sobic008G088872 Sobic002G429300--Sobic008G088872 Sobic009G131300--Sobic002G429300 Sobic002G401500 Sobic002G401500 Sobic009G131300--Sobic002G401500 Sobic009G131300--Sobic005G162500 Sobic009G131300--Sobic008G088872 Sobic010G059500 Sobic010G059500 Sobic009G131300--Sobic010G059500 Sobic009G131300--Sobic008G098900 Sobic009G131300--Sobic006G184900 Sobic009G131300--Sobic001G493700 Sobic009G084900 Sobic009G084900 Sobic009G131300--Sobic009G084900 Sobic005G162500--Sobic001G493700 Sobic005G162500--Sobic002G429300 Sobic001G370900 Sobic001G370900 Sobic005G162500--Sobic001G370900 Sobic005G162500--Sobic009G131300 Sobic005G162500--Sobic008G088872 Sobic003G186000 Sobic003G186000 Sobic005G162500--Sobic003G186000 Sobic005G162500--Sobic008G098900 Sobic004G276400 Sobic004G276400 Sobic005G162500--Sobic004G276400 Sobic005G162500--Sobic002G335600 Sobic006G184900--Sobic002G335600 Sobic006G184900--Sobic002G429300 Sobic006G184900--Sobic008G088872 Sobic006G184900--Sobic002G042600 Sobic006G184900--Sobic001G370900 Sobic006G184900--Sobic009G131300 Sobic006G184900--Sobic001G493700 Sobic002G179400 Sobic002G179400 Sobic006G184900--Sobic002G179400 Sobic005G062200 Sobic005G062200 Sobic006G184900--Sobic005G062200 Sobic001G263600--Sobic008G088872 Sobic001G263600--Sobic002G429300 Sobic002G142900 Sobic002G142900 Sobic001G263600--Sobic002G142900 Sobic001G263600--Sobic005G062200 Sobic001G263600--Sobic008G098900 Sobic001G263600--Sobic002G042600 Sobic001G273700 Sobic001G273700 Sobic001G263600--Sobic001G273700 Sobic003G072200 Sobic003G072200 Sobic001G263600--Sobic003G072200 Sobic001G263600--Sobic009G131300 Sobic001G065100 Sobic001G065100 Sobic002G042600--Sobic001G065100 Sobic002G042600--Sobic006G184900 Sobic002G042600--Sobic008G098900 Sobic002G042600--Sobic002G401500 Sobic002G042600--Sobic002G179400 Sobic004G322400 Sobic004G322400 Sobic002G042600--Sobic004G322400 Sobic002G042600--Sobic002G429300 Sobic002G042600--Sobic008G088872 Sobic002G042600--Sobic001G370900 Sobic008G098900--Sobic001G370900 Sobic008G085300 Sobic008G085300 Sobic008G098900--Sobic008G085300 Sobic001G117200 Sobic001G117200 Sobic008G098900--Sobic001G117200 Sobic003G205200 Sobic003G205200 Sobic008G098900--Sobic003G205200 Sobic005G001000 Sobic005G001000 Sobic008G098900--Sobic005G001000 Sobic008G098900--Sobic003G072200 Sobic008G098900--Sobic005G162500 Sobic008G098900--Sobic002G042600 Sobic008G098900--Sobic004G276400 Sobic001G493700--Sobic002G179400 Sobic001G493700--Sobic005G162500 Sobic001G493700--Sobic006G184900 Sobic002G133300 Sobic002G133300 Sobic001G493700--Sobic002G133300 Sobic001G493700--Sobic009G131300 Sobic001G493700--Sobic002G429300 Sobic001G493700--Sobic002G042600 Sobic001G493700--Sobic002G335600 Sobic006G088200 Sobic006G088200 Sobic001G493700--Sobic006G088200 Sobic002G335600--Sobic006G184900 Sobic002G335600--Sobic005G162500 Sobic006G032300 Sobic006G032300 Sobic002G335600--Sobic006G032300 Sobic002G335600--Sobic009G131300 Sobic002G335600--Sobic002G429300 Sobic002G335600--Sobic001G493700 Sobic002G335600--Sobic008G088872 Sobic004G040500 Sobic004G040500 Sobic002G335600--Sobic004G040500 Sobic004G053500 Sobic004G053500 Sobic002G335600--Sobic004G053500 Sobic008G088872--Sobic005G162500 Sobic008G088872--Sobic001G370900 Sobic008G088872--Sobic009G131300 Sobic008G088872--Sobic006G184900 Sobic008G088872--Sobic005G062200 Sobic008G088872--Sobic001G263600 Sobic008G088872--Sobic002G042600 Sobic008G088872--Sobic002G429300 Sobic008G088872--Sobic002G335600
Octagon: transcription factors


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