Gene annotation
Transcriptome id Sobic.004G322400.3,Sobic.004G322400.1,Sobic.004G322400.2
Synonym Sb04g035280
Functional annotation WD40-like, putative, expressed
UniProt A0A194YTR3
Pfam PF07064
Panther DB PTHR22746 PTHR22746:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G28350 : Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor
RAP-DB (Rice) LOC_Os02g54500.1 : WD40-like, putative, expressed
MaizeGDB (Corn) Zm00025a025769 , Zm00025a032985 , Zm00025a022383
Brachypodium KQK02074
Barley HORVU6Hr1G083220.8 , HORVU6Hr1G083220.9 , HORVU6Hr1G083220.1 , HORVU6Hr1G083220.3 , HORVU6Hr1G083220.2 , HORVU6Hr1G083220.5 , HORVU6Hr1G083220.4 , HORVU6Hr1G083220.7 , HORVU6Hr1G083220.6 , HORVU6Hr1G083210.2 , HORVU6Hr1G083210.1 , HORVU6Hr1G083220.19 , HORVU6Hr1G083220.18 , HORVU6Hr1G083220.15 , HORVU6Hr1G083220.14 , HORVU6Hr1G083220.17 , HORVU6Hr1G083220.16 , HORVU6Hr1G083220.11 , HORVU6Hr1G083220.10 , HORVU6Hr1G083220.13 , HORVU6Hr1G083220.12
Wheat TraesCS6B02G377200 , TraesCS6D02G327100 , TraesCS6A02G344300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G401500 WD domain, G-beta repeat domain containing protein, expressed K14005: protein transport protein SEC31
2 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
3 Sobic.009G131300 cation-transporting ATPase, putative, expressed K14950: ATP13A1, manganese-transporting P-type ATPase
4 Sobic.010G223100 PAP/25A associated domain containing protein, putative, expressed -
5 Sobic.008G124800 expressed protein -
6 Sobic.002G179400 DNA binding protein, putative, expressed -
7 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
8 Sobic.001G065100 cullin, putative, expressed K10609: cullin 4
9 Sobic.010G275500 EF hand family protein, putative, expressed -
10 Sobic.001G493700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed -
11 Sobic.002G429300 importin subunit beta, putative, expressed -
12 Sobic.009G084900 expressed protein -
13 Sobic.010G000800 PHD-finger domain containing protein, expressed -
14 Sobic.006G077200 ubiquitin interaction motif-containing protein, putative, expressed -
15 Sobic.003G337300 HEAT repeat family protein, putative, expressed K08876: SCY1-like protein 1
16 Sobic.001G089600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
17 Sobic.003G189600 M16 domain containing zinc peptidase, putative, expressed -
18 Sobic.004G096400 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
19 Sobic.003G072200 zinc finger protein, putative, expressed K11978: E3 ubiquitin-protein ligase UBR3
20 Sobic.003G249600 vacuolar protein sorting-associated protein 16, putative, expressed -


Gene co-expression network
sample Sobic004G322400 Sobic004G322400 Sobic002G401500 Sobic002G401500 Sobic004G322400--Sobic002G401500 Sobic002G042600 Sobic002G042600 Sobic004G322400--Sobic002G042600 Sobic009G131300 Sobic009G131300 Sobic004G322400--Sobic009G131300 Sobic010G223100 Sobic010G223100 Sobic004G322400--Sobic010G223100 Sobic008G124800 Sobic008G124800 Sobic004G322400--Sobic008G124800 Sobic002G179400 Sobic002G179400 Sobic004G322400--Sobic002G179400 Sobic010G059500 Sobic010G059500 Sobic004G322400--Sobic010G059500 Sobic001G065100 Sobic001G065100 Sobic004G322400--Sobic001G065100 Sobic010G275500 Sobic010G275500 Sobic004G322400--Sobic010G275500 Sobic002G401500--Sobic004G322400 Sobic002G401500--Sobic009G131300 Sobic002G401500--Sobic002G042600 Sobic004G053500 Sobic004G053500 Sobic002G401500--Sobic004G053500 Sobic005G062200 Sobic005G062200 Sobic002G401500--Sobic005G062200 Sobic002G429300 Sobic002G429300 Sobic002G401500--Sobic002G429300 Sobic002G401500--Sobic001G065100 Sobic008G088872 Sobic008G088872 Sobic002G401500--Sobic008G088872 Sobic001G263600 Sobic001G263600 Sobic002G401500--Sobic001G263600 Sobic002G042600--Sobic001G065100 Sobic006G184900 Sobic006G184900 Sobic002G042600--Sobic006G184900 Sobic008G098900 Sobic008G098900 Sobic002G042600--Sobic008G098900 Sobic002G042600--Sobic002G401500 Sobic002G042600--Sobic002G179400 Sobic002G042600--Sobic004G322400 Sobic002G042600--Sobic002G429300 Sobic002G042600--Sobic008G088872 Sobic001G370900 Sobic001G370900 Sobic002G042600--Sobic001G370900 Sobic009G131300--Sobic002G429300 Sobic009G131300--Sobic002G401500 Sobic005G162500 Sobic005G162500 Sobic009G131300--Sobic005G162500 Sobic009G131300--Sobic008G088872 Sobic009G131300--Sobic010G059500 Sobic009G131300--Sobic008G098900 Sobic009G131300--Sobic006G184900 Sobic001G493700 Sobic001G493700 Sobic009G131300--Sobic001G493700 Sobic009G084900 Sobic009G084900 Sobic009G131300--Sobic009G084900 Sobic004G204100 Sobic004G204100 Sobic010G223100--Sobic004G204100 Sobic010G223100--Sobic004G322400 Sobic010G223100--Sobic010G275500 Sobic010G223100--Sobic009G084900 Sobic004G023100 Sobic004G023100 Sobic010G223100--Sobic004G023100 Sobic001G287500 Sobic001G287500 Sobic010G223100--Sobic001G287500 Sobic003G072200 Sobic003G072200 Sobic010G223100--Sobic003G072200 Sobic003G189600 Sobic003G189600 Sobic010G223100--Sobic003G189600 Sobic010G185400 Sobic010G185400 Sobic010G223100--Sobic010G185400 Sobic002G340900 Sobic002G340900 Sobic008G124800--Sobic002G340900 Sobic006G021700 Sobic006G021700 Sobic008G124800--Sobic006G021700 Sobic007G019300 Sobic007G019300 Sobic008G124800--Sobic007G019300 Sobic008G124800--Sobic004G322400 Sobic001G404600 Sobic001G404600 Sobic008G124800--Sobic001G404600 Sobic003G233400 Sobic003G233400 Sobic008G124800--Sobic003G233400 Sobic002G308500 Sobic002G308500 Sobic008G124800--Sobic002G308500 Sobic003G405500 Sobic003G405500 Sobic008G124800--Sobic003G405500 Sobic008G124800--Sobic002G401500 Sobic002G179400--Sobic001G493700 Sobic002G179400--Sobic002G042600 Sobic002G179400--Sobic004G053500 Sobic002G179400--Sobic002G429300 Sobic002G179400--Sobic006G184900 Sobic002G179400--Sobic003G233400 Sobic002G133300 Sobic002G133300 Sobic002G179400--Sobic002G133300 Sobic002G179400--Sobic001G065100 Sobic002G179400--Sobic004G322400 Sobic010G059500--Sobic009G084900 Sobic010G059500--Sobic009G131300 Sobic001G035200 Sobic001G035200 Sobic010G059500--Sobic001G035200 Sobic004G096400 Sobic004G096400 Sobic010G059500--Sobic004G096400 Sobic006G234700 Sobic006G234700 Sobic010G059500--Sobic006G234700 Sobic001G145400 Sobic001G145400 Sobic010G059500--Sobic001G145400 Sobic010G034100 Sobic010G034100 Sobic010G059500--Sobic010G034100 Sobic006G077200 Sobic006G077200 Sobic010G059500--Sobic006G077200 Sobic001G493200 Sobic001G493200 Sobic010G059500--Sobic001G493200 Sobic001G065100--Sobic002G042600 Sobic001G065100--Sobic002G179400 Sobic001G065100--Sobic001G263600 Sobic001G065100--Sobic002G401500 Sobic001G065100--Sobic001G493700 Sobic001G065100--Sobic008G088872 Sobic001G065100--Sobic004G322400 Sobic001G065100--Sobic005G062200 Sobic003G296900 Sobic003G296900 Sobic001G065100--Sobic003G296900 Sobic010G053800 Sobic010G053800 Sobic010G275500--Sobic010G053800 Sobic004G072100 Sobic004G072100 Sobic010G275500--Sobic004G072100 Sobic006G012500 Sobic006G012500 Sobic010G275500--Sobic006G012500 Sobic001G155000 Sobic001G155000 Sobic010G275500--Sobic001G155000 Sobic010G116600 Sobic010G116600 Sobic010G275500--Sobic010G116600 Sobic010G069100 Sobic010G069100 Sobic010G275500--Sobic010G069100 Sobic009G119000 Sobic009G119000 Sobic010G275500--Sobic009G119000 Sobic007G183900 Sobic007G183900 Sobic010G275500--Sobic007G183900 Sobic002G397500 Sobic002G397500 Sobic010G275500--Sobic002G397500
Octagon: transcription factors


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