Gene annotation
Transcriptome id Sobic.008G124800.2,Sobic.008G124800.1
Synonym CLUB, Sb08g017700, AtTRS130
Functional annotation expressed protein
UniProt A0A1B6PDQ3 , C5YPL6
Pfam PF11817 PF12584
Panther DB PTHR13251
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G54440 : CLUB
RAP-DB (Rice) LOC_Os12g36760.1 : expressed protein
MaizeGDB (Corn) Zm00025a025495
Brachypodium KQJ86388
Barley HORVU5Hr1G023880.4 , HORVU5Hr1G023880.5 , HORVU5Hr1G023880.6 , HORVU5Hr1G023880.7 , HORVU5Hr1G023880.1 , HORVU5Hr1G023880.2 , HORVU5Hr1G023880.3 , HORVU5Hr1G023880.8
Wheat TraesCS5A02G091200 , TraesCS5A02G091200 , TraesCS5D02G103300 , TraesCS5D02G103300 , TraesCS5D02G103300 , TraesCS5B02G098200 , TraesCS5B02G098200 , TraesCS5B02G098200 , TraesCS5B02G098200 , TraesCS5B02G098200
Populus -


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cDNA sequences
Sobic.008G124800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G340900 ATMIN7, putative, expressed K13462: guanine nucleotide-exchange factor
2 Sobic.006G021700 expressed protein K17600: vacuolar protein sorting-associated protein 54
3 Sobic.007G019300 adaptin, putative, expressed K12397: AP-3 complex subunit beta
4 Sobic.004G322400 WD40-like, putative, expressed -
5 Sobic.001G404600 expressed protein K18270: Rab3 GTPase-activating protein catalytic subunit
6 Sobic.003G233400 expressed protein -
7 Sobic.002G308500 peptide-Nasparagine amidase, putative, expressed K01456: E3.5.1.52, NGLY1, peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase
8 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
9 Sobic.002G401500 WD domain, G-beta repeat domain containing protein, expressed K14005: protein transport protein SEC31
10 Sobic.003G314700 expressed protein -
11 Sobic.006G166200 Alg9-like mannosyltransferase protein, putative, expressed K03847: alpha-1,6-mannosyltransferase
12 Sobic.004G053500 HEAT repeat family protein, putative, expressed K17263: CAND1, cullin-associated NEDD8-dissociated protein 1
13 Sobic.003G143800 nodal modulator 1 precursor, putative, expressed -
14 Sobic.003G312100 guanine nucleotide exchange family protein, putative, expressed -
15 Sobic.002G179400 DNA binding protein, putative, expressed -
16 Sobic.001G426600 SH3 domain containing protein, expressed -
17 Sobic.003G249600 vacuolar protein sorting-associated protein 16, putative, expressed -
18 Sobic.003G029600 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
19 Sobic.001G287500 heat shock protein DnaJ, putative, expressed K09533: DnaJ homolog subfamily C member 13
20 Sobic.010G080700 DNA-directed RNA polymerase subunit, putative, expressed K03021: RPC2, DNA-directed RNA polymerase III subunit RPC2


Gene co-expression network
sample Sobic008G124800 Sobic008G124800 Sobic002G340900 Sobic002G340900 Sobic008G124800--Sobic002G340900 Sobic006G021700 Sobic006G021700 Sobic008G124800--Sobic006G021700 Sobic007G019300 Sobic007G019300 Sobic008G124800--Sobic007G019300 Sobic004G322400 Sobic004G322400 Sobic008G124800--Sobic004G322400 Sobic001G404600 Sobic001G404600 Sobic008G124800--Sobic001G404600 Sobic003G233400 Sobic003G233400 Sobic008G124800--Sobic003G233400 Sobic002G308500 Sobic002G308500 Sobic008G124800--Sobic002G308500 Sobic003G405500 Sobic003G405500 Sobic008G124800--Sobic003G405500 Sobic002G401500 Sobic002G401500 Sobic008G124800--Sobic002G401500 Sobic002G340900--Sobic008G124800 Sobic001G437400 Sobic001G437400 Sobic002G340900--Sobic001G437400 Sobic002G340900--Sobic006G021700 Sobic004G053500 Sobic004G053500 Sobic002G340900--Sobic004G053500 Sobic001G117800 Sobic001G117800 Sobic002G340900--Sobic001G117800 Sobic009G118900 Sobic009G118900 Sobic002G340900--Sobic009G118900 Sobic003G029600 Sobic003G029600 Sobic002G340900--Sobic003G029600 Sobic004G223300 Sobic004G223300 Sobic002G340900--Sobic004G223300 Sobic001G474400 Sobic001G474400 Sobic002G340900--Sobic001G474400 Sobic006G021700--Sobic008G124800 Sobic006G077300 Sobic006G077300 Sobic006G021700--Sobic006G077300 Sobic006G021700--Sobic002G340900 Sobic005G059500 Sobic005G059500 Sobic006G021700--Sobic005G059500 Sobic003G209200 Sobic003G209200 Sobic006G021700--Sobic003G209200 Sobic003G346400 Sobic003G346400 Sobic006G021700--Sobic003G346400 Sobic010G000800 Sobic010G000800 Sobic006G021700--Sobic010G000800 Sobic007G005500 Sobic007G005500 Sobic006G021700--Sobic007G005500 Sobic005G110499 Sobic005G110499 Sobic006G021700--Sobic005G110499 Sobic003G312100 Sobic003G312100 Sobic007G019300--Sobic003G312100 Sobic007G019300--Sobic008G124800 Sobic007G019300--Sobic003G233400 Sobic001G426600 Sobic001G426600 Sobic007G019300--Sobic001G426600 Sobic003G314700 Sobic003G314700 Sobic007G019300--Sobic003G314700 Sobic001G170100 Sobic001G170100 Sobic007G019300--Sobic001G170100 Sobic010G147833 Sobic010G147833 Sobic007G019300--Sobic010G147833 Sobic004G260100 Sobic004G260100 Sobic007G019300--Sobic004G260100 Sobic009G084900 Sobic009G084900 Sobic007G019300--Sobic009G084900 Sobic004G322400--Sobic002G401500 Sobic002G042600 Sobic002G042600 Sobic004G322400--Sobic002G042600 Sobic009G131300 Sobic009G131300 Sobic004G322400--Sobic009G131300 Sobic010G223100 Sobic010G223100 Sobic004G322400--Sobic010G223100 Sobic004G322400--Sobic008G124800 Sobic002G179400 Sobic002G179400 Sobic004G322400--Sobic002G179400 Sobic010G059500 Sobic010G059500 Sobic004G322400--Sobic010G059500 Sobic001G065100 Sobic001G065100 Sobic004G322400--Sobic001G065100 Sobic010G275500 Sobic010G275500 Sobic004G322400--Sobic010G275500 Sobic001G404600--Sobic008G124800 Sobic001G404600--Sobic003G233400 Sobic001G404600--Sobic002G308500 Sobic001G287500 Sobic001G287500 Sobic001G404600--Sobic001G287500 Sobic002G020700 Sobic002G020700 Sobic001G404600--Sobic002G020700 Sobic001G404600--Sobic009G084900 Sobic001G404600--Sobic004G322400 Sobic001G404600--Sobic006G021700 Sobic001G301200 Sobic001G301200 Sobic001G404600--Sobic001G301200 Sobic003G233400--Sobic001G287500 Sobic003G072200 Sobic003G072200 Sobic003G233400--Sobic003G072200 Sobic007G098500 Sobic007G098500 Sobic003G233400--Sobic007G098500 Sobic001G137000 Sobic001G137000 Sobic003G233400--Sobic001G137000 Sobic003G233400--Sobic003G312100 Sobic008G092600 Sobic008G092600 Sobic003G233400--Sobic008G092600 Sobic002G396500 Sobic002G396500 Sobic003G233400--Sobic002G396500 Sobic003G233400--Sobic002G179400 Sobic004G051200 Sobic004G051200 Sobic003G233400--Sobic004G051200 Sobic002G308500--Sobic008G124800 Sobic002G308500--Sobic003G233400 Sobic008G099800 Sobic008G099800 Sobic002G308500--Sobic008G099800 Sobic010G228500 Sobic010G228500 Sobic002G308500--Sobic010G228500 Sobic002G308500--Sobic001G404600 Sobic002G308500--Sobic007G019300 Sobic002G308500--Sobic001G137000 Sobic002G308500--Sobic003G312100 Sobic002G308500--Sobic001G426600 Sobic001G145400 Sobic001G145400 Sobic003G405500--Sobic001G145400 Sobic003G405500--Sobic008G124800 Sobic002G430300 Sobic002G430300 Sobic003G405500--Sobic002G430300 Sobic003G405500--Sobic009G084900 Sobic006G166200 Sobic006G166200 Sobic003G405500--Sobic006G166200 Sobic004G141800 Sobic004G141800 Sobic003G405500--Sobic004G141800 Sobic006G077200 Sobic006G077200 Sobic003G405500--Sobic006G077200 Sobic003G405500--Sobic010G059500 Sobic003G405500--Sobic003G314700 Sobic002G401500--Sobic004G322400 Sobic002G401500--Sobic009G131300 Sobic002G401500--Sobic002G042600 Sobic002G401500--Sobic004G053500 Sobic005G062200 Sobic005G062200 Sobic002G401500--Sobic005G062200 Sobic002G429300 Sobic002G429300 Sobic002G401500--Sobic002G429300 Sobic002G401500--Sobic001G065100 Sobic008G088872 Sobic008G088872 Sobic002G401500--Sobic008G088872 Sobic001G263600 Sobic001G263600 Sobic002G401500--Sobic001G263600
Octagon: transcription factors


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