Gene annotation
Transcriptome id Sobic.001G426600.1,Sobic.001G426600.2
Synonym Sb01g040090
Functional annotation SH3 domain containing protein, expressed
UniProt A0A1Z5SAC6 , A0A1B6QP81
Pfam PF00018
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G07360 : SH3 domain-containing protein
RAP-DB (Rice) LOC_Os03g15900.2 : SH3 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a001734 , Zm00025a045960
Brachypodium KQK22427
Barley HORVU4Hr1G060880.8 , HORVU4Hr1G060880.9 , HORVU4Hr1G060880.4 , HORVU4Hr1G060880.5 , HORVU4Hr1G060880.6 , HORVU4Hr1G060880.7 , HORVU4Hr1G060880.1 , HORVU4Hr1G060880.3 , HORVU4Hr1G060880.10
Wheat TraesCS4D02G214000 , TraesCS4D02G214000 , TraesCS4D02G214000 , TraesCS4D02G214000 , TraesCS4B02G213200 , TraesCS4B02G213200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G534800 Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@adapitin protein, putative, expressed K11824: AP-2 complex subunit alpha
2 Sobic.001G170100 WD domain, G-beta repeat domain containing protein, expressed -
3 Sobic.009G049400 "SRS3(Ortholog in rice:Kitagawa et al., 2010)"(PubMedID : 31659920)@ATKINESIN-13A/KINESIN-13A, putative, expressed K10393: KIF2_24, kinesin family member 2/24
4 Sobic.001G369000 adapitin protein, putative, expressed K12392: AP-1 complex subunit beta-1
5 Sobic.010G275500 EF hand family protein, putative, expressed -
6 Sobic.001G287500 heat shock protein DnaJ, putative, expressed K09533: DnaJ homolog subfamily C member 13
7 Sobic.007G019300 adaptin, putative, expressed K12397: AP-3 complex subunit beta
8 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
9 Sobic.004G051200 WD domain containing protein, putative, expressed -
10 Sobic.008G099800 expressed protein -
11 Sobic.006G138000 expressed protein -
12 Sobic.006G012500 protein transport protein Sec24-like, putative, expressed K14007: protein transport protein SEC24
13 Sobic.008G124800 expressed protein -
14 Sobic.010G147833 - -
15 Sobic.003G233400 expressed protein -
16 Sobic.010G223100 PAP/25A associated domain containing protein, putative, expressed -
17 Sobic.007G120500 Sec1 family transport protein, putative, expressed K12479: vacuolar protein sorting-associated protein 45
18 Sobic.003G314700 expressed protein -
19 Sobic.010G053800 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
20 Sobic.003G337300 HEAT repeat family protein, putative, expressed K08876: SCY1-like protein 1


Gene co-expression network
sample Sobic001G426600 Sobic001G426600 Sobic001G534800 Sobic001G534800 Sobic001G426600--Sobic001G534800 Sobic001G170100 Sobic001G170100 Sobic001G426600--Sobic001G170100 Sobic009G049400 Sobic009G049400 Sobic001G426600--Sobic009G049400 Sobic001G369000 Sobic001G369000 Sobic001G426600--Sobic001G369000 Sobic010G275500 Sobic010G275500 Sobic001G426600--Sobic010G275500 Sobic001G287500 Sobic001G287500 Sobic001G426600--Sobic001G287500 Sobic007G019300 Sobic007G019300 Sobic001G426600--Sobic007G019300 Sobic004G039600 Sobic004G039600 Sobic001G426600--Sobic004G039600 Sobic004G051200 Sobic004G051200 Sobic001G426600--Sobic004G051200 Sobic001G281100 Sobic001G281100 Sobic001G534800--Sobic001G281100 Sobic008G099800 Sobic008G099800 Sobic001G534800--Sobic008G099800 Sobic004G004300 Sobic004G004300 Sobic001G534800--Sobic004G004300 Sobic004G135400 Sobic004G135400 Sobic001G534800--Sobic004G135400 Sobic005G003300 Sobic005G003300 Sobic001G534800--Sobic005G003300 Sobic005G026200 Sobic005G026200 Sobic001G534800--Sobic005G026200 Sobic006G012500 Sobic006G012500 Sobic001G534800--Sobic006G012500 Sobic004G113400 Sobic004G113400 Sobic001G534800--Sobic004G113400 Sobic001G065000 Sobic001G065000 Sobic001G534800--Sobic001G065000 Sobic006G138000 Sobic006G138000 Sobic001G170100--Sobic006G138000 Sobic001G518400 Sobic001G518400 Sobic001G170100--Sobic001G518400 Sobic001G170100--Sobic001G426600 Sobic001G335900 Sobic001G335900 Sobic001G170100--Sobic001G335900 Sobic001G170100--Sobic001G369000 Sobic001G170100--Sobic010G275500 Sobic003G240700 Sobic003G240700 Sobic001G170100--Sobic003G240700 Sobic010G147833 Sobic010G147833 Sobic001G170100--Sobic010G147833 Sobic001G170100--Sobic007G019300 Sobic009G049400--Sobic001G369000 Sobic009G229600 Sobic009G229600 Sobic009G049400--Sobic009G229600 Sobic009G049400--Sobic001G426600 Sobic003G394200 Sobic003G394200 Sobic009G049400--Sobic003G394200 Sobic009G049400--Sobic001G335900 Sobic006G163800 Sobic006G163800 Sobic009G049400--Sobic006G163800 Sobic003G189600 Sobic003G189600 Sobic009G049400--Sobic003G189600 Sobic009G049400--Sobic004G039600 Sobic009G049400--Sobic003G240700 Sobic001G369000--Sobic004G039600 Sobic001G369000--Sobic001G335900 Sobic007G120500 Sobic007G120500 Sobic001G369000--Sobic007G120500 Sobic001G369000--Sobic003G240700 Sobic001G369000--Sobic006G163800 Sobic001G369000--Sobic006G138000 Sobic001G369000--Sobic009G049400 Sobic001G369000--Sobic001G426600 Sobic001G369000--Sobic009G229600 Sobic010G053800 Sobic010G053800 Sobic010G275500--Sobic010G053800 Sobic004G072100 Sobic004G072100 Sobic010G275500--Sobic004G072100 Sobic010G275500--Sobic006G012500 Sobic001G155000 Sobic001G155000 Sobic010G275500--Sobic001G155000 Sobic010G116600 Sobic010G116600 Sobic010G275500--Sobic010G116600 Sobic010G069100 Sobic010G069100 Sobic010G275500--Sobic010G069100 Sobic009G119000 Sobic009G119000 Sobic010G275500--Sobic009G119000 Sobic007G183900 Sobic007G183900 Sobic010G275500--Sobic007G183900 Sobic002G397500 Sobic002G397500 Sobic010G275500--Sobic002G397500 Sobic003G233400 Sobic003G233400 Sobic001G287500--Sobic003G233400 Sobic003G072200 Sobic003G072200 Sobic001G287500--Sobic003G072200 Sobic007G098500 Sobic007G098500 Sobic001G287500--Sobic007G098500 Sobic001G287500--Sobic004G051200 Sobic008G092600 Sobic008G092600 Sobic001G287500--Sobic008G092600 Sobic001G347500 Sobic001G347500 Sobic001G287500--Sobic001G347500 Sobic001G287500--Sobic001G426600 Sobic004G040500 Sobic004G040500 Sobic001G287500--Sobic004G040500 Sobic004G204100 Sobic004G204100 Sobic001G287500--Sobic004G204100 Sobic003G312100 Sobic003G312100 Sobic007G019300--Sobic003G312100 Sobic008G124800 Sobic008G124800 Sobic007G019300--Sobic008G124800 Sobic007G019300--Sobic003G233400 Sobic007G019300--Sobic001G426600 Sobic003G314700 Sobic003G314700 Sobic007G019300--Sobic003G314700 Sobic007G019300--Sobic001G170100 Sobic007G019300--Sobic010G147833 Sobic004G260100 Sobic004G260100 Sobic007G019300--Sobic004G260100 Sobic009G084900 Sobic009G084900 Sobic007G019300--Sobic009G084900 Sobic004G039600--Sobic006G012500 Sobic004G039600--Sobic001G369000 Sobic007G132100 Sobic007G132100 Sobic004G039600--Sobic007G132100 Sobic004G039600--Sobic008G099800 Sobic006G126100 Sobic006G126100 Sobic004G039600--Sobic006G126100 Sobic004G039600--Sobic010G053800 Sobic006G131000 Sobic006G131000 Sobic004G039600--Sobic006G131000 Sobic004G039600--Sobic001G534800 Sobic004G039600--Sobic007G120500 Sobic004G051200--Sobic003G072200 Sobic006G037700 Sobic006G037700 Sobic004G051200--Sobic006G037700 Sobic004G051200--Sobic001G287500 Sobic004G051200--Sobic003G233400 Sobic004G051200--Sobic007G098500 Sobic004G051200--Sobic008G099800 Sobic004G051200--Sobic001G065000 Sobic004G051200--Sobic010G275500 Sobic004G051200--Sobic001G347500
Octagon: transcription factors


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