Gene annotation
Transcriptome id Sobic.010G147833.2,Sobic.010G147833.1
Synonym -
Functional annotation -
UniProt A0A1W0VT54 , A0A1W0VT41
Pfam -
Panther DB PTHR22844 PTHR22844:SF185
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G11270 : Transducin/WD40 repeat-like superfamily protein
RAP-DB (Rice) LOC_Os06g22550.1 : transducin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a050837
Brachypodium KQK18254
Barley HORVU7Hr1G081140.4 , HORVU7Hr1G081140.3 , HORVU7Hr1G081140.2 , HORVU7Hr1G081140.1
Wheat TraesCS7A02G342200 , TraesCS7A02G342200 , TraesCS7B02G240600 , TraesCS7B02G240600 , TraesCS7A02G342200 , TraesCS7D02G337300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G214600 expressed protein -
2 Sobic.004G260100 tetratricopeptide repeat, putative, expressed K03255: TIF31, protein TIF31
3 Sobic.001G170100 WD domain, G-beta repeat domain containing protein, expressed -
4 Sobic.007G019300 adaptin, putative, expressed K12397: AP-3 complex subunit beta
5 Sobic.001G426600 SH3 domain containing protein, expressed -
6 Sobic.003G057700 WD domain, G-beta repeat domain containing protein, expressed -
7 Sobic.003G249600 vacuolar protein sorting-associated protein 16, putative, expressed -
8 Sobic.007G120500 Sec1 family transport protein, putative, expressed K12479: vacuolar protein sorting-associated protein 45
9 Sobic.001G287500 heat shock protein DnaJ, putative, expressed K09533: DnaJ homolog subfamily C member 13
10 Sobic.003G312100 guanine nucleotide exchange family protein, putative, expressed -
11 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
12 Sobic.008G124800 expressed protein -
13 Sobic.004G085000 expressed protein K14310: NUP205, nuclear pore complex protein Nup205
14 Sobic.003G126600 rab GDP dissociation inhibitor alpha, putative, expressed -
15 Sobic.006G185200 RNA polymerase IV subunit, putative, expressed K16250: DNA-directed RNA polymerase IV subunit 1
16 Sobic.003G233400 expressed protein -
17 Sobic.002G308500 peptide-Nasparagine amidase, putative, expressed K01456: E3.5.1.52, NGLY1, peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase
18 Sobic.001G219900 expressed protein -
19 Sobic.002G397500 SAC3/GANP family protein, expressed -
20 Sobic.007G061700 vacuolar protein sorting-associated protein 18, putative, expressed -


Gene co-expression network
sample Sobic010G147833 Sobic010G147833 Sobic001G214600 Sobic001G214600 Sobic010G147833--Sobic001G214600 Sobic004G260100 Sobic004G260100 Sobic010G147833--Sobic004G260100 Sobic001G170100 Sobic001G170100 Sobic010G147833--Sobic001G170100 Sobic007G019300 Sobic007G019300 Sobic010G147833--Sobic007G019300 Sobic001G426600 Sobic001G426600 Sobic010G147833--Sobic001G426600 Sobic003G057700 Sobic003G057700 Sobic010G147833--Sobic003G057700 Sobic003G249600 Sobic003G249600 Sobic010G147833--Sobic003G249600 Sobic007G120500 Sobic007G120500 Sobic010G147833--Sobic007G120500 Sobic001G287500 Sobic001G287500 Sobic010G147833--Sobic001G287500 Sobic001G214600--Sobic004G260100 Sobic009G247400 Sobic009G247400 Sobic001G214600--Sobic009G247400 Sobic009G084900 Sobic009G084900 Sobic001G214600--Sobic009G084900 Sobic001G214600--Sobic010G147833 Sobic002G317200 Sobic002G317200 Sobic001G214600--Sobic002G317200 Sobic004G223600 Sobic004G223600 Sobic001G214600--Sobic004G223600 Sobic006G234700 Sobic006G234700 Sobic001G214600--Sobic006G234700 Sobic001G219900 Sobic001G219900 Sobic001G214600--Sobic001G219900 Sobic001G493200 Sobic001G493200 Sobic001G214600--Sobic001G493200 Sobic004G260100--Sobic001G214600 Sobic004G260100--Sobic009G084900 Sobic002G397500 Sobic002G397500 Sobic004G260100--Sobic002G397500 Sobic001G089600 Sobic001G089600 Sobic004G260100--Sobic001G089600 Sobic004G260100--Sobic001G493200 Sobic001G334700 Sobic001G334700 Sobic004G260100--Sobic001G334700 Sobic004G260100--Sobic010G147833 Sobic004G023100 Sobic004G023100 Sobic004G260100--Sobic004G023100 Sobic010G053600 Sobic010G053600 Sobic004G260100--Sobic010G053600 Sobic006G138000 Sobic006G138000 Sobic001G170100--Sobic006G138000 Sobic001G518400 Sobic001G518400 Sobic001G170100--Sobic001G518400 Sobic001G170100--Sobic001G426600 Sobic001G335900 Sobic001G335900 Sobic001G170100--Sobic001G335900 Sobic001G369000 Sobic001G369000 Sobic001G170100--Sobic001G369000 Sobic010G275500 Sobic010G275500 Sobic001G170100--Sobic010G275500 Sobic003G240700 Sobic003G240700 Sobic001G170100--Sobic003G240700 Sobic001G170100--Sobic010G147833 Sobic001G170100--Sobic007G019300 Sobic003G312100 Sobic003G312100 Sobic007G019300--Sobic003G312100 Sobic008G124800 Sobic008G124800 Sobic007G019300--Sobic008G124800 Sobic003G233400 Sobic003G233400 Sobic007G019300--Sobic003G233400 Sobic007G019300--Sobic001G426600 Sobic003G314700 Sobic003G314700 Sobic007G019300--Sobic003G314700 Sobic007G019300--Sobic001G170100 Sobic007G019300--Sobic010G147833 Sobic007G019300--Sobic004G260100 Sobic007G019300--Sobic009G084900 Sobic001G534800 Sobic001G534800 Sobic001G426600--Sobic001G534800 Sobic001G426600--Sobic001G170100 Sobic009G049400 Sobic009G049400 Sobic001G426600--Sobic009G049400 Sobic001G426600--Sobic001G369000 Sobic001G426600--Sobic010G275500 Sobic001G426600--Sobic001G287500 Sobic001G426600--Sobic007G019300 Sobic004G039600 Sobic004G039600 Sobic001G426600--Sobic004G039600 Sobic004G051200 Sobic004G051200 Sobic001G426600--Sobic004G051200 Sobic003G057700--Sobic007G120500 Sobic003G057700--Sobic010G147833 Sobic003G057700--Sobic003G249600 Sobic001G145400 Sobic001G145400 Sobic003G057700--Sobic001G145400 Sobic006G077200 Sobic006G077200 Sobic003G057700--Sobic006G077200 Sobic007G132100 Sobic007G132100 Sobic003G057700--Sobic007G132100 Sobic001G276200 Sobic001G276200 Sobic003G057700--Sobic001G276200 Sobic001G515100 Sobic001G515100 Sobic003G057700--Sobic001G515100 Sobic003G057700--Sobic001G493200 Sobic003G249600--Sobic006G077200 Sobic004G096400 Sobic004G096400 Sobic003G249600--Sobic004G096400 Sobic003G249600--Sobic007G120500 Sobic003G249600--Sobic007G132100 Sobic003G126600 Sobic003G126600 Sobic003G249600--Sobic003G126600 Sobic004G072100 Sobic004G072100 Sobic003G249600--Sobic004G072100 Sobic004G322400 Sobic004G322400 Sobic003G249600--Sobic004G322400 Sobic003G249600--Sobic008G124800 Sobic003G249600--Sobic004G039600 Sobic007G120500--Sobic001G369000 Sobic007G120500--Sobic004G039600 Sobic007G120500--Sobic007G132100 Sobic006G012500 Sobic006G012500 Sobic007G120500--Sobic006G012500 Sobic007G120500--Sobic003G057700 Sobic007G120500--Sobic003G249600 Sobic007G120500--Sobic004G072100 Sobic010G053800 Sobic010G053800 Sobic007G120500--Sobic010G053800 Sobic003G394200 Sobic003G394200 Sobic007G120500--Sobic003G394200 Sobic001G287500--Sobic003G233400 Sobic003G072200 Sobic003G072200 Sobic001G287500--Sobic003G072200 Sobic007G098500 Sobic007G098500 Sobic001G287500--Sobic007G098500 Sobic001G287500--Sobic004G051200 Sobic008G092600 Sobic008G092600 Sobic001G287500--Sobic008G092600 Sobic001G347500 Sobic001G347500 Sobic001G287500--Sobic001G347500 Sobic001G287500--Sobic001G426600 Sobic004G040500 Sobic004G040500 Sobic001G287500--Sobic004G040500 Sobic004G204100 Sobic004G204100 Sobic001G287500--Sobic004G204100
Octagon: transcription factors


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