Gene annotation
Transcriptome id Sobic.001G219900.1,Sobic.001G219900.2
Synonym Sb01g019330
Functional annotation expressed protein
UniProt C5WYG0
Pfam -
Panther DB PTHR12596:SF1 PTHR12596
NCBI CDD KOG4541; Nuclear transport receptor exportin 4 (importin beta superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G04490 : -
RAP-DB (Rice) LOC_Os10g33710.1 : expressed protein
MaizeGDB (Corn) Zm00025a006603
Brachypodium KQJ97088
Barley HORVU1Hr1G041060.3 , HORVU1Hr1G041060.40 , HORVU1Hr1G041060.25 , HORVU1Hr1G041060.15 , HORVU1Hr1G041060.18 , HORVU1Hr1G041060.19 , HORVU1Hr1G041060.14 , HORVU1Hr1G041060.16 , HORVU1Hr1G041060.17 , HORVU1Hr1G041060.12 , HORVU1Hr1G041060.13 , HORVU1Hr1G041060.21 , HORVU1Hr1G041060.20 , HORVU1Hr1G041060.23 , HORVU1Hr1G041060.24 , HORVU1Hr1G041060.27 , HORVU1Hr1G041060.26 , HORVU1Hr1G041060.29 , HORVU1Hr1G041060.28 , HORVU1Hr1G041060.36 , HORVU1Hr1G041060.37 , HORVU1Hr1G041060.34 , HORVU1Hr1G041060.35 , HORVU1Hr1G041060.32 , HORVU1Hr1G041060.33 , HORVU1Hr1G041060.30 , HORVU1Hr1G041060.31 , HORVU1Hr1G041060.38
Wheat TraesCS1A02G154300 , TraesCS1A02G154300 , TraesCS1A02G154300 , TraesCS1A02G154300 , TraesCS1B02G170900 , TraesCS1B02G170900 , TraesCS1D02G153100 , TraesCS1D02G153100 , TraesCS1D02G153100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
2 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
3 Sobic.004G223600 transcription factor-related, putative, expressed K15199: general transcription factor 3C polypeptide 1
4 Sobic.001G058700 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
5 Sobic.002G397500 SAC3/GANP family protein, expressed -
6 Sobic.001G050600 expressed protein -
7 Sobic.010G001100 chromo domain containing protein, expressed -
8 Sobic.009G119000 tetratricopeptide repeat containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
9 Sobic.008G009700 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
10 Sobic.001G280900 expressed protein -
11 Sobic.007G172400 AAA-type ATPase family protein, putative, expressed K13338: peroxin-1
12 Sobic.007G157000 protein transport protein, putative, expressed K14006: protein transport protein SEC23
13 Sobic.005G008800 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
14 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
15 Sobic.002G153700 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
16 Sobic.010G112100 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
17 Sobic.001G214600 expressed protein -
18 Sobic.009G109200 phosphatidylinositol kinase, putative, expressed K07203: MTOR, FRAP, serine/threonine-protein kinase mTOR
19 Sobic.010G065300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
20 Sobic.003G259100 GPI transamidase component family protein, putative, expressed K05289: GPI-anchor transamidase subunit GAA1


Gene co-expression network
sample Sobic001G219900 Sobic001G219900 Sobic003G408600 Sobic003G408600 Sobic001G219900--Sobic003G408600 Sobic002G071500 Sobic002G071500 Sobic001G219900--Sobic002G071500 Sobic004G223600 Sobic004G223600 Sobic001G219900--Sobic004G223600 Sobic001G058700 Sobic001G058700 Sobic001G219900--Sobic001G058700 Sobic002G397500 Sobic002G397500 Sobic001G219900--Sobic002G397500 Sobic001G050600 Sobic001G050600 Sobic001G219900--Sobic001G050600 Sobic010G001100 Sobic010G001100 Sobic001G219900--Sobic010G001100 Sobic009G119000 Sobic009G119000 Sobic001G219900--Sobic009G119000 Sobic008G009700 Sobic008G009700 Sobic001G219900--Sobic008G009700 Sobic001G540400 Sobic001G540400 Sobic003G408600--Sobic001G540400 Sobic005G008800 Sobic005G008800 Sobic003G408600--Sobic005G008800 Sobic003G408600--Sobic002G397500 Sobic005G112300 Sobic005G112300 Sobic003G408600--Sobic005G112300 Sobic007G163100 Sobic007G163100 Sobic003G408600--Sobic007G163100 Sobic010G112100 Sobic010G112100 Sobic003G408600--Sobic010G112100 Sobic003G408600--Sobic001G058700 Sobic003G408600--Sobic002G071500 Sobic002G045600 Sobic002G045600 Sobic003G408600--Sobic002G045600 Sobic002G071500--Sobic005G112300 Sobic002G071500--Sobic003G408600 Sobic002G071500--Sobic008G009700 Sobic010G116600 Sobic010G116600 Sobic002G071500--Sobic010G116600 Sobic001G026200 Sobic001G026200 Sobic002G071500--Sobic001G026200 Sobic002G153700 Sobic002G153700 Sobic002G071500--Sobic002G153700 Sobic010G069100 Sobic010G069100 Sobic002G071500--Sobic010G069100 Sobic003G119000 Sobic003G119000 Sobic002G071500--Sobic003G119000 Sobic010G201500 Sobic010G201500 Sobic002G071500--Sobic010G201500 Sobic004G223600--Sobic001G219900 Sobic001G214600 Sobic001G214600 Sobic004G223600--Sobic001G214600 Sobic002G317200 Sobic002G317200 Sobic004G223600--Sobic002G317200 Sobic003G307000 Sobic003G307000 Sobic004G223600--Sobic003G307000 Sobic007G042400 Sobic007G042400 Sobic004G223600--Sobic007G042400 Sobic009G247400 Sobic009G247400 Sobic004G223600--Sobic009G247400 Sobic001G311500 Sobic001G311500 Sobic004G223600--Sobic001G311500 Sobic004G223600--Sobic002G071500 Sobic003G152400 Sobic003G152400 Sobic004G223600--Sobic003G152400 Sobic001G058700--Sobic003G408600 Sobic007G172400 Sobic007G172400 Sobic001G058700--Sobic007G172400 Sobic001G058700--Sobic001G050600 Sobic007G062800 Sobic007G062800 Sobic001G058700--Sobic007G062800 Sobic001G058700--Sobic001G540400 Sobic001G058700--Sobic005G008800 Sobic004G347400 Sobic004G347400 Sobic001G058700--Sobic004G347400 Sobic005G028600 Sobic005G028600 Sobic001G058700--Sobic005G028600 Sobic001G058700--Sobic001G219900 Sobic002G397500--Sobic003G408600 Sobic002G397500--Sobic007G062800 Sobic002G397500--Sobic005G112300 Sobic002G397500--Sobic001G540400 Sobic009G109200 Sobic009G109200 Sobic002G397500--Sobic009G109200 Sobic003G072200 Sobic003G072200 Sobic002G397500--Sobic003G072200 Sobic004G242400 Sobic004G242400 Sobic002G397500--Sobic004G242400 Sobic004G276400 Sobic004G276400 Sobic002G397500--Sobic004G276400 Sobic002G397500--Sobic010G112100 Sobic007G098500 Sobic007G098500 Sobic001G050600--Sobic007G098500 Sobic001G037100 Sobic001G037100 Sobic001G050600--Sobic001G037100 Sobic001G050600--Sobic001G058700 Sobic001G050600--Sobic001G219900 Sobic001G050600--Sobic007G172400 Sobic001G137000 Sobic001G137000 Sobic001G050600--Sobic001G137000 Sobic001G280900 Sobic001G280900 Sobic001G050600--Sobic001G280900 Sobic008G092600 Sobic008G092600 Sobic001G050600--Sobic008G092600 Sobic003G259100 Sobic003G259100 Sobic001G050600--Sobic003G259100 Sobic010G065300 Sobic010G065300 Sobic010G001100--Sobic010G065300 Sobic004G048800 Sobic004G048800 Sobic010G001100--Sobic004G048800 Sobic002G396500 Sobic002G396500 Sobic010G001100--Sobic002G396500 Sobic003G293200 Sobic003G293200 Sobic010G001100--Sobic003G293200 Sobic010G001100--Sobic004G242400 Sobic010G001100--Sobic009G109200 Sobic002G154000 Sobic002G154000 Sobic010G001100--Sobic002G154000 Sobic001G352900 Sobic001G352900 Sobic010G001100--Sobic001G352900 Sobic009G256300 Sobic009G256300 Sobic010G001100--Sobic009G256300 Sobic009G119000--Sobic002G153700 Sobic003G059750 Sobic003G059750 Sobic009G119000--Sobic003G059750 Sobic009G119000--Sobic002G071500 Sobic009G119000--Sobic010G065300 Sobic008G153000 Sobic008G153000 Sobic009G119000--Sobic008G153000 Sobic010G275500 Sobic010G275500 Sobic009G119000--Sobic010G275500 Sobic003G416700 Sobic003G416700 Sobic009G119000--Sobic003G416700 Sobic009G119000--Sobic004G048800 Sobic009G119000--Sobic001G311500 Sobic002G309600 Sobic002G309600 Sobic008G009700--Sobic002G309600 Sobic008G009700--Sobic005G008800 Sobic008G009700--Sobic005G112300 Sobic007G065400 Sobic007G065400 Sobic008G009700--Sobic007G065400 Sobic008G009700--Sobic002G071500 Sobic010G002100 Sobic010G002100 Sobic008G009700--Sobic010G002100 Sobic008G009700--Sobic002G153700 Sobic008G009700--Sobic010G065300 Sobic001G241200 Sobic001G241200 Sobic008G009700--Sobic001G241200
Octagon: transcription factors


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