Gene annotation
Transcriptome id Sobic.001G280900.2
Synonym Sb01g027630
Functional annotation expressed protein
UniProt C5WWI0
Pfam -
Panther DB PTHR35833 PTHR35833:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g43075.1 : expressed protein
MaizeGDB (Corn) Zm00025a003592
Brachypodium KQJ96219
Barley HORVU1Hr1G051460.7 , HORVU1Hr1G051460.6 , HORVU1Hr1G051460.5 , HORVU1Hr1G051460.4 , HORVU1Hr1G051460.2 , HORVU1Hr1G051460.1 , HORVU1Hr1G051460.8 , HORVU1Hr1G051460.31 , HORVU1Hr1G051460.30 , HORVU1Hr1G051460.33 , HORVU1Hr1G051460.32 , HORVU1Hr1G051460.35 , HORVU1Hr1G051460.34 , HORVU1Hr1G051460.37 , HORVU1Hr1G051460.36 , HORVU1Hr1G051460.3 , HORVU1Hr1G051460.9 , HORVU1Hr1G051460.26 , HORVU1Hr1G051460.27 , HORVU1Hr1G051460.24 , HORVU1Hr1G051460.25 , HORVU1Hr1G051460.22 , HORVU1Hr1G051460.23 , HORVU1Hr1G051460.20 , HORVU1Hr1G051460.28 , HORVU1Hr1G051460.29 , HORVU1Hr1G051460.19 , HORVU1Hr1G051460.18 , HORVU1Hr1G051460.17 , HORVU1Hr1G051460.16 , HORVU1Hr1G051460.15 , HORVU1Hr1G051460.14 , HORVU1Hr1G051460.13 , HORVU1Hr1G051460.12 , HORVU1Hr1G051460.11 , HORVU1Hr1G051460.10 , HORVU1Hr1G051460.21
Wheat TraesCS1A02G198700 , TraesCS1A02G198700 , TraesCS1A02G198700 , TraesCS1A02G198700 , TraesCS1D02G202400 , TraesCS1D02G202400 , TraesCS1D02G202400 , TraesCS1B02G213700 , TraesCS1B02G213700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G540400 expressed protein -
2 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
3 Sobic.002G397500 SAC3/GANP family protein, expressed -
4 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
5 Sobic.009G109200 phosphatidylinositol kinase, putative, expressed K07203: MTOR, FRAP, serine/threonine-protein kinase mTOR
6 Sobic.005G008800 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
7 Sobic.007G062800 SET domain containing protein, expressed -
8 Sobic.001G058700 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
9 Sobic.001G050600 expressed protein -
10 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
11 Sobic.001G219900 expressed protein -
12 Sobic.010G002100 expressed protein K15164: mediator of RNA polymerase II transcription subunit 13
13 Sobic.010G139000 surp module family protein, putative, expressed K13123: G patch domain-containing protein 1
14 Sobic.001G241200 protein kinase domain containing protein, expressed -
15 Sobic.004G314000 expressed protein -
16 Sobic.001G037100 expressed protein K19026: spatacsin
17 Sobic.001G474600 calmodulin-binding transcription activator, putative, expressed -
18 Sobic.010G112000 expressed protein K17906: autophagy-related protein 2
19 Sobic.008G009700 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
20 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein


Gene co-expression network
sample Sobic001G280900 Sobic001G280900 Sobic001G540400 Sobic001G540400 Sobic001G280900--Sobic001G540400 Sobic005G112300 Sobic005G112300 Sobic001G280900--Sobic005G112300 Sobic002G397500 Sobic002G397500 Sobic001G280900--Sobic002G397500 Sobic003G408600 Sobic003G408600 Sobic001G280900--Sobic003G408600 Sobic009G109200 Sobic009G109200 Sobic001G280900--Sobic009G109200 Sobic005G008800 Sobic005G008800 Sobic001G280900--Sobic005G008800 Sobic007G062800 Sobic007G062800 Sobic001G280900--Sobic007G062800 Sobic001G058700 Sobic001G058700 Sobic001G280900--Sobic001G058700 Sobic001G050600 Sobic001G050600 Sobic001G280900--Sobic001G050600 Sobic001G289600 Sobic001G289600 Sobic001G540400--Sobic001G289600 Sobic001G540400--Sobic003G408600 Sobic001G540400--Sobic007G062800 Sobic001G540400--Sobic005G008800 Sobic004G034900 Sobic004G034900 Sobic001G540400--Sobic004G034900 Sobic001G540400--Sobic005G112300 Sobic003G422500 Sobic003G422500 Sobic001G540400--Sobic003G422500 Sobic001G540400--Sobic002G397500 Sobic010G112100 Sobic010G112100 Sobic001G540400--Sobic010G112100 Sobic001G363500 Sobic001G363500 Sobic005G112300--Sobic001G363500 Sobic005G112300--Sobic007G062800 Sobic005G112300--Sobic010G112100 Sobic010G139000 Sobic010G139000 Sobic005G112300--Sobic010G139000 Sobic007G105100 Sobic007G105100 Sobic005G112300--Sobic007G105100 Sobic005G112300--Sobic001G540400 Sobic010G010700 Sobic010G010700 Sobic005G112300--Sobic010G010700 Sobic005G112300--Sobic005G008800 Sobic002G071500 Sobic002G071500 Sobic005G112300--Sobic002G071500 Sobic002G397500--Sobic003G408600 Sobic002G397500--Sobic007G062800 Sobic002G397500--Sobic005G112300 Sobic002G397500--Sobic001G540400 Sobic002G397500--Sobic009G109200 Sobic003G072200 Sobic003G072200 Sobic002G397500--Sobic003G072200 Sobic004G242400 Sobic004G242400 Sobic002G397500--Sobic004G242400 Sobic004G276400 Sobic004G276400 Sobic002G397500--Sobic004G276400 Sobic002G397500--Sobic010G112100 Sobic003G408600--Sobic001G540400 Sobic003G408600--Sobic005G008800 Sobic003G408600--Sobic002G397500 Sobic003G408600--Sobic005G112300 Sobic007G163100 Sobic007G163100 Sobic003G408600--Sobic007G163100 Sobic003G408600--Sobic010G112100 Sobic003G408600--Sobic001G058700 Sobic003G408600--Sobic002G071500 Sobic002G045600 Sobic002G045600 Sobic003G408600--Sobic002G045600 Sobic010G105200 Sobic010G105200 Sobic009G109200--Sobic010G105200 Sobic009G109200--Sobic004G242400 Sobic009G109200--Sobic002G397500 Sobic001G542400 Sobic001G542400 Sobic009G109200--Sobic001G542400 Sobic009G109200--Sobic001G540400 Sobic009G109200--Sobic005G008800 Sobic009G109200--Sobic004G276400 Sobic009G109200--Sobic003G408600 Sobic009G109200--Sobic010G112100 Sobic005G008800--Sobic001G540400 Sobic005G008800--Sobic003G408600 Sobic005G008800--Sobic005G112300 Sobic005G008800--Sobic007G062800 Sobic005G008800--Sobic001G289600 Sobic004G314000 Sobic004G314000 Sobic005G008800--Sobic004G314000 Sobic008G009700 Sobic008G009700 Sobic005G008800--Sobic008G009700 Sobic001G289800 Sobic001G289800 Sobic005G008800--Sobic001G289800 Sobic005G008800--Sobic009G109200 Sobic007G062800--Sobic001G540400 Sobic007G062800--Sobic005G112300 Sobic002G405800 Sobic002G405800 Sobic007G062800--Sobic002G405800 Sobic002G008900 Sobic002G008900 Sobic007G062800--Sobic002G008900 Sobic007G062800--Sobic010G010700 Sobic007G062800--Sobic004G242400 Sobic007G062800--Sobic004G034900 Sobic007G062800--Sobic004G276400 Sobic007G062800--Sobic002G397500 Sobic001G058700--Sobic003G408600 Sobic007G172400 Sobic007G172400 Sobic001G058700--Sobic007G172400 Sobic001G058700--Sobic001G050600 Sobic001G058700--Sobic007G062800 Sobic001G058700--Sobic001G540400 Sobic001G058700--Sobic005G008800 Sobic004G347400 Sobic004G347400 Sobic001G058700--Sobic004G347400 Sobic005G028600 Sobic005G028600 Sobic001G058700--Sobic005G028600 Sobic001G219900 Sobic001G219900 Sobic001G058700--Sobic001G219900 Sobic007G098500 Sobic007G098500 Sobic001G050600--Sobic007G098500 Sobic001G037100 Sobic001G037100 Sobic001G050600--Sobic001G037100 Sobic001G050600--Sobic001G058700 Sobic001G050600--Sobic001G219900 Sobic001G050600--Sobic007G172400 Sobic001G137000 Sobic001G137000 Sobic001G050600--Sobic001G137000 Sobic001G050600--Sobic001G280900 Sobic008G092600 Sobic008G092600 Sobic001G050600--Sobic008G092600 Sobic003G259100 Sobic003G259100 Sobic001G050600--Sobic003G259100
Octagon: transcription factors


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