Gene annotation
Transcriptome id Sobic.001G050600.2,Sobic.001G050600.3,Sobic.001G050600.1
Synonym Sb01g004640, NOV
Functional annotation expressed protein
UniProt A0A120GUU0 , A0A1Z5S4F9
Pfam PF13020
Panther DB PTHR32387 PTHR32387:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G13750 : Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
RAP-DB (Rice) LOC_Os03g58910.2 : expressed protein
MaizeGDB (Corn) Zm00025a008620
Brachypodium KQK12629
Barley HORVU5Hr1G108780.9 , HORVU5Hr1G108780.8 , HORVU5Hr1G108780.7 , HORVU5Hr1G108780.6 , HORVU5Hr1G108780.5 , HORVU5Hr1G108780.4 , HORVU5Hr1G108780.3 , HORVU5Hr1G108780.2 , HORVU5Hr1G108780.1 , HORVU5Hr1G108780.10
Wheat TraesCS5A02G191100 , TraesCS5A02G191100 , TraesCS5B02G460800 , TraesCS5D02G462300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G098500 BIG, putative, expressed K10691: UBR4, E3 ubiquitin-protein ligase UBR4
2 Sobic.001G037100 expressed protein K19026: spatacsin
3 Sobic.001G058700 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
4 Sobic.001G219900 expressed protein -
5 Sobic.007G172400 AAA-type ATPase family protein, putative, expressed K13338: peroxin-1
6 Sobic.001G137000 aberrant pollen transmission 1, putative, expressed -
7 Sobic.001G280900 expressed protein -
8 Sobic.008G092600 ubiquitin-protein ligase 1, putative, expressed K10592: HUWE1, MULE, E3 ubiquitin-protein ligase HUWE1
9 Sobic.003G259100 GPI transamidase component family protein, putative, expressed K05289: GPI-anchor transamidase subunit GAA1
10 Sobic.008G099800 expressed protein -
11 Sobic.001G347500 expressed protein -
12 Sobic.002G397500 SAC3/GANP family protein, expressed -
13 Sobic.001G117200 AGC_AGC_other_GWLd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
14 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
15 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
16 Sobic.007G062800 SET domain containing protein, expressed -
17 Sobic.003G072200 zinc finger protein, putative, expressed K11978: E3 ubiquitin-protein ligase UBR3
18 Sobic.006G037700 phosphoribulokinase/Uridine kinase family protein, expressed -
19 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
20 Sobic.001G540400 expressed protein -


Gene co-expression network
sample Sobic001G050600 Sobic001G050600 Sobic007G098500 Sobic007G098500 Sobic001G050600--Sobic007G098500 Sobic001G037100 Sobic001G037100 Sobic001G050600--Sobic001G037100 Sobic001G058700 Sobic001G058700 Sobic001G050600--Sobic001G058700 Sobic001G219900 Sobic001G219900 Sobic001G050600--Sobic001G219900 Sobic007G172400 Sobic007G172400 Sobic001G050600--Sobic007G172400 Sobic001G137000 Sobic001G137000 Sobic001G050600--Sobic001G137000 Sobic001G280900 Sobic001G280900 Sobic001G050600--Sobic001G280900 Sobic008G092600 Sobic008G092600 Sobic001G050600--Sobic008G092600 Sobic003G259100 Sobic003G259100 Sobic001G050600--Sobic003G259100 Sobic007G098500--Sobic008G092600 Sobic002G396500 Sobic002G396500 Sobic007G098500--Sobic002G396500 Sobic010G105200 Sobic010G105200 Sobic007G098500--Sobic010G105200 Sobic003G072200 Sobic003G072200 Sobic007G098500--Sobic003G072200 Sobic007G098500--Sobic001G050600 Sobic007G098500--Sobic001G137000 Sobic003G233400 Sobic003G233400 Sobic007G098500--Sobic003G233400 Sobic001G287500 Sobic001G287500 Sobic007G098500--Sobic001G287500 Sobic006G265200 Sobic006G265200 Sobic007G098500--Sobic006G265200 Sobic001G037100--Sobic001G050600 Sobic001G117200 Sobic001G117200 Sobic001G037100--Sobic001G117200 Sobic007G062800 Sobic007G062800 Sobic001G037100--Sobic007G062800 Sobic003G229500 Sobic003G229500 Sobic001G037100--Sobic003G229500 Sobic001G540400 Sobic001G540400 Sobic001G037100--Sobic001G540400 Sobic001G037100--Sobic001G280900 Sobic001G037100--Sobic007G098500 Sobic001G037100--Sobic008G092600 Sobic001G037100--Sobic001G058700 Sobic003G408600 Sobic003G408600 Sobic001G058700--Sobic003G408600 Sobic001G058700--Sobic007G172400 Sobic001G058700--Sobic001G050600 Sobic001G058700--Sobic007G062800 Sobic001G058700--Sobic001G540400 Sobic005G008800 Sobic005G008800 Sobic001G058700--Sobic005G008800 Sobic004G347400 Sobic004G347400 Sobic001G058700--Sobic004G347400 Sobic005G028600 Sobic005G028600 Sobic001G058700--Sobic005G028600 Sobic001G058700--Sobic001G219900 Sobic001G219900--Sobic003G408600 Sobic002G071500 Sobic002G071500 Sobic001G219900--Sobic002G071500 Sobic004G223600 Sobic004G223600 Sobic001G219900--Sobic004G223600 Sobic001G219900--Sobic001G058700 Sobic002G397500 Sobic002G397500 Sobic001G219900--Sobic002G397500 Sobic001G219900--Sobic001G050600 Sobic010G001100 Sobic010G001100 Sobic001G219900--Sobic010G001100 Sobic009G119000 Sobic009G119000 Sobic001G219900--Sobic009G119000 Sobic008G009700 Sobic008G009700 Sobic001G219900--Sobic008G009700 Sobic007G172400--Sobic001G058700 Sobic007G172400--Sobic002G071500 Sobic007G172400--Sobic001G050600 Sobic007G172400--Sobic004G347400 Sobic002G419800 Sobic002G419800 Sobic007G172400--Sobic002G419800 Sobic007G172400--Sobic001G219900 Sobic004G113400 Sobic004G113400 Sobic007G172400--Sobic004G113400 Sobic001G474600 Sobic001G474600 Sobic007G172400--Sobic001G474600 Sobic007G172400--Sobic003G408600 Sobic001G137000--Sobic008G092600 Sobic001G137000--Sobic007G098500 Sobic001G137000--Sobic003G233400 Sobic003G312100 Sobic003G312100 Sobic001G137000--Sobic003G312100 Sobic001G137000--Sobic001G117200 Sobic001G137000--Sobic002G396500 Sobic001G137000--Sobic001G050600 Sobic008G098900 Sobic008G098900 Sobic001G137000--Sobic008G098900 Sobic008G099800 Sobic008G099800 Sobic001G137000--Sobic008G099800 Sobic001G280900--Sobic001G540400 Sobic005G112300 Sobic005G112300 Sobic001G280900--Sobic005G112300 Sobic001G280900--Sobic002G397500 Sobic001G280900--Sobic003G408600 Sobic009G109200 Sobic009G109200 Sobic001G280900--Sobic009G109200 Sobic001G280900--Sobic005G008800 Sobic001G280900--Sobic007G062800 Sobic001G280900--Sobic001G058700 Sobic001G280900--Sobic001G050600 Sobic008G092600--Sobic007G098500 Sobic002G147600 Sobic002G147600 Sobic008G092600--Sobic002G147600 Sobic008G092600--Sobic001G137000 Sobic004G040500 Sobic004G040500 Sobic008G092600--Sobic004G040500 Sobic008G092600--Sobic003G072200 Sobic008G092600--Sobic008G098900 Sobic008G085300 Sobic008G085300 Sobic008G092600--Sobic008G085300 Sobic008G092600--Sobic003G233400 Sobic008G092600--Sobic001G117200 Sobic003G259100--Sobic004G113400 Sobic003G259100--Sobic008G099800 Sobic003G259100--Sobic001G050600 Sobic003G259100--Sobic003G072200 Sobic001G273700 Sobic001G273700 Sobic003G259100--Sobic001G273700 Sobic003G259100--Sobic001G058700 Sobic001G347500 Sobic001G347500 Sobic003G259100--Sobic001G347500 Sobic003G259100--Sobic001G219900 Sobic010G034000 Sobic010G034000 Sobic003G259100--Sobic010G034000
Octagon: transcription factors


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