Gene annotation
Transcriptome id Sobic.007G172400.1
Synonym Sb07g024470, PEX1
Functional annotation AAA-type ATPase family protein, putative, expressed
UniProt C5YNA6
Pfam PF09262 PF00004
Panther DB PTHR23077 PTHR23077:SF55
NCBI CDD -
KEGG Orthology K13338; peroxin-1
Gene Ontology GO:0007031; peroxisome organization GO:0005777peroxisome GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT5G08470 : peroxisome 1
RAP-DB (Rice) LOC_Os08g44240.1 : AAA-type ATPase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a030585
Brachypodium KQJ99333 , KQJ99334
Barley HORVU7Hr1G058410.22 , HORVU7Hr1G058410.20 , HORVU7Hr1G058410.21 , HORVU7Hr1G058410.7 , HORVU7Hr1G058410.6 , HORVU7Hr1G058410.5 , HORVU7Hr1G058410.4 , HORVU7Hr1G058410.3 , HORVU7Hr1G058410.2 , HORVU7Hr1G058410.1 , HORVU7Hr1G058410.9 , HORVU7Hr1G058410.8 , HORVU7Hr1G058410.17 , HORVU7Hr1G058410.16 , HORVU7Hr1G058410.15 , HORVU7Hr1G058410.14 , HORVU7Hr1G058410.13 , HORVU7Hr1G058410.12 , HORVU7Hr1G058410.11 , HORVU7Hr1G058410.10 , HORVU7Hr1G058410.18 , HORVU7Hr1G058410.19
Wheat TraesCS7A02G277100 , TraesCS7A02G277100 , TraesCS7D02G277100 , TraesCS7D02G277100 , TraesCS7B02G174800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G058700 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
2 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
3 Sobic.001G050600 expressed protein -
4 Sobic.004G347400 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
5 Sobic.002G419800 structural constituent of ribosome, putative, expressed -
6 Sobic.001G219900 expressed protein -
7 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
8 Sobic.001G474600 calmodulin-binding transcription activator, putative, expressed -
9 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
10 Sobic.004G329400 formin, putative, expressed -
11 Sobic.006G245400 -(PubMedID : 34525227)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
12 Sobic.001G241200 protein kinase domain containing protein, expressed -
13 Sobic.004G052900 biotin--protein ligase, putative, expressed K01942: biotin---protein ligase
14 Sobic.001G498600 3-5 exonuclease family protein, putative, expressed K12591: RRP6, exosome complex exonuclease RRP6
15 Sobic.005G008800 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
16 Sobic.003G259100 GPI transamidase component family protein, putative, expressed K05289: GPI-anchor transamidase subunit GAA1
17 Sobic.001G178700 NBS-LRR disease resistance protein, putative, expressed -
18 Sobic.001G146800 expressed protein -
19 Sobic.003G119000 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
20 Sobic.003G100800 acetyl-CoA acetyltransferase, cytosolic, putative, expressed K00626: ACAT, acetyl-CoA C-acetyltransferase


Gene co-expression network
sample Sobic007G172400 Sobic007G172400 Sobic001G058700 Sobic001G058700 Sobic007G172400--Sobic001G058700 Sobic002G071500 Sobic002G071500 Sobic007G172400--Sobic002G071500 Sobic001G050600 Sobic001G050600 Sobic007G172400--Sobic001G050600 Sobic004G347400 Sobic004G347400 Sobic007G172400--Sobic004G347400 Sobic002G419800 Sobic002G419800 Sobic007G172400--Sobic002G419800 Sobic001G219900 Sobic001G219900 Sobic007G172400--Sobic001G219900 Sobic004G113400 Sobic004G113400 Sobic007G172400--Sobic004G113400 Sobic001G474600 Sobic001G474600 Sobic007G172400--Sobic001G474600 Sobic003G408600 Sobic003G408600 Sobic007G172400--Sobic003G408600 Sobic001G058700--Sobic003G408600 Sobic001G058700--Sobic007G172400 Sobic001G058700--Sobic001G050600 Sobic007G062800 Sobic007G062800 Sobic001G058700--Sobic007G062800 Sobic001G540400 Sobic001G540400 Sobic001G058700--Sobic001G540400 Sobic005G008800 Sobic005G008800 Sobic001G058700--Sobic005G008800 Sobic001G058700--Sobic004G347400 Sobic005G028600 Sobic005G028600 Sobic001G058700--Sobic005G028600 Sobic001G058700--Sobic001G219900 Sobic005G112300 Sobic005G112300 Sobic002G071500--Sobic005G112300 Sobic002G071500--Sobic003G408600 Sobic008G009700 Sobic008G009700 Sobic002G071500--Sobic008G009700 Sobic010G116600 Sobic010G116600 Sobic002G071500--Sobic010G116600 Sobic001G026200 Sobic001G026200 Sobic002G071500--Sobic001G026200 Sobic002G153700 Sobic002G153700 Sobic002G071500--Sobic002G153700 Sobic010G069100 Sobic010G069100 Sobic002G071500--Sobic010G069100 Sobic003G119000 Sobic003G119000 Sobic002G071500--Sobic003G119000 Sobic010G201500 Sobic010G201500 Sobic002G071500--Sobic010G201500 Sobic007G098500 Sobic007G098500 Sobic001G050600--Sobic007G098500 Sobic001G037100 Sobic001G037100 Sobic001G050600--Sobic001G037100 Sobic001G050600--Sobic001G058700 Sobic001G050600--Sobic001G219900 Sobic001G050600--Sobic007G172400 Sobic001G137000 Sobic001G137000 Sobic001G050600--Sobic001G137000 Sobic001G280900 Sobic001G280900 Sobic001G050600--Sobic001G280900 Sobic008G092600 Sobic008G092600 Sobic001G050600--Sobic008G092600 Sobic003G259100 Sobic003G259100 Sobic001G050600--Sobic003G259100 Sobic003G422500 Sobic003G422500 Sobic004G347400--Sobic003G422500 Sobic004G347400--Sobic001G058700 Sobic003G118200 Sobic003G118200 Sobic004G347400--Sobic003G118200 Sobic001G114000 Sobic001G114000 Sobic004G347400--Sobic001G114000 Sobic004G347400--Sobic007G172400 Sobic004G331100 Sobic004G331100 Sobic004G347400--Sobic004G331100 Sobic009G053900 Sobic009G053900 Sobic004G347400--Sobic009G053900 Sobic001G065000 Sobic001G065000 Sobic004G347400--Sobic001G065000 Sobic004G347400--Sobic001G474600 Sobic002G419800--Sobic004G331100 Sobic001G050200 Sobic001G050200 Sobic002G419800--Sobic001G050200 Sobic009G027300 Sobic009G027300 Sobic002G419800--Sobic009G027300 Sobic007G075400 Sobic007G075400 Sobic002G419800--Sobic007G075400 Sobic001G290100 Sobic001G290100 Sobic002G419800--Sobic001G290100 Sobic002G419800--Sobic007G172400 Sobic001G289600 Sobic001G289600 Sobic002G419800--Sobic001G289600 Sobic007G024700 Sobic007G024700 Sobic002G419800--Sobic007G024700 Sobic007G105100 Sobic007G105100 Sobic002G419800--Sobic007G105100 Sobic001G219900--Sobic003G408600 Sobic001G219900--Sobic002G071500 Sobic004G223600 Sobic004G223600 Sobic001G219900--Sobic004G223600 Sobic001G219900--Sobic001G058700 Sobic002G397500 Sobic002G397500 Sobic001G219900--Sobic002G397500 Sobic001G219900--Sobic001G050600 Sobic010G001100 Sobic010G001100 Sobic001G219900--Sobic010G001100 Sobic009G119000 Sobic009G119000 Sobic001G219900--Sobic009G119000 Sobic001G219900--Sobic008G009700 Sobic009G010600 Sobic009G010600 Sobic004G113400--Sobic009G010600 Sobic004G113400--Sobic003G408600 Sobic004G329400 Sobic004G329400 Sobic004G113400--Sobic004G329400 Sobic004G113400--Sobic001G058700 Sobic008G099800 Sobic008G099800 Sobic004G113400--Sobic008G099800 Sobic001G178700 Sobic001G178700 Sobic004G113400--Sobic001G178700 Sobic001G117200 Sobic001G117200 Sobic004G113400--Sobic001G117200 Sobic001G534800 Sobic001G534800 Sobic004G113400--Sobic001G534800 Sobic002G430000 Sobic002G430000 Sobic004G113400--Sobic002G430000 Sobic003G280800 Sobic003G280800 Sobic001G474600--Sobic003G280800 Sobic009G166300 Sobic009G166300 Sobic001G474600--Sobic009G166300 Sobic001G125200 Sobic001G125200 Sobic001G474600--Sobic001G125200 Sobic003G372700 Sobic003G372700 Sobic001G474600--Sobic003G372700 Sobic007G217000 Sobic007G217000 Sobic001G474600--Sobic007G217000 Sobic007G096000 Sobic007G096000 Sobic001G474600--Sobic007G096000 Sobic007G207000 Sobic007G207000 Sobic001G474600--Sobic007G207000 Sobic009G191000 Sobic009G191000 Sobic001G474600--Sobic009G191000 Sobic001G241200 Sobic001G241200 Sobic001G474600--Sobic001G241200 Sobic003G408600--Sobic001G540400 Sobic003G408600--Sobic005G008800 Sobic003G408600--Sobic002G397500 Sobic003G408600--Sobic005G112300 Sobic007G163100 Sobic007G163100 Sobic003G408600--Sobic007G163100 Sobic010G112100 Sobic010G112100 Sobic003G408600--Sobic010G112100 Sobic003G408600--Sobic001G058700 Sobic003G408600--Sobic002G071500 Sobic002G045600 Sobic002G045600 Sobic003G408600--Sobic002G045600
Octagon: transcription factors


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