Gene annotation
Transcriptome id Sobic.001G137000.1
Synonym SAB, Sb01g011950
Functional annotation aberrant pollen transmission 1, putative, expressed
UniProt A0A1Z5S5J5
Pfam PF10347 PF10351
Panther DB PTHR15678 PTHR15678:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G58250 : Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain
RAP-DB (Rice) LOC_Os03g23030.1 : aberrant pollen transmission 1, putative, expressed
MaizeGDB (Corn) Zm00025a007461
Brachypodium KQK13784 , KQK13785 , PNT74314
Barley HORVU4Hr1G003840.9 , HORVU4Hr1G003840.8 , HORVU4Hr1G003840.7 , HORVU4Hr1G003840.6 , HORVU4Hr1G003840.5 , HORVU4Hr1G003840.4 , HORVU4Hr1G003840.3 , HORVU4Hr1G003840.2 , HORVU4Hr1G003840.17 , HORVU4Hr1G003840.16 , HORVU4Hr1G003840.15 , HORVU4Hr1G003840.14 , HORVU4Hr1G003840.13 , HORVU4Hr1G003840.12 , HORVU4Hr1G003840.11 , HORVU4Hr1G003840.10 , HORVU4Hr1G003840.19 , HORVU4Hr1G003840.18
Wheat TraesCS4A02G289200 , TraesCS4B02G025700 , TraesCS4B02G025700 , TraesCS4D02G022800 , TraesCS4D02G022800 , TraesCS4D02G022800 , TraesCS4D02G022800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G092600 ubiquitin-protein ligase 1, putative, expressed K10592: HUWE1, MULE, E3 ubiquitin-protein ligase HUWE1
2 Sobic.007G098500 BIG, putative, expressed K10691: UBR4, E3 ubiquitin-protein ligase UBR4
3 Sobic.003G233400 expressed protein -
4 Sobic.003G312100 guanine nucleotide exchange family protein, putative, expressed -
5 Sobic.001G117200 AGC_AGC_other_GWLd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
6 Sobic.002G396500 FAT domain-containing protein, putative, expressed K08874: transformation/transcription domain-associated protein
7 Sobic.001G050600 expressed protein -
8 Sobic.008G098900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
9 Sobic.008G099800 expressed protein -
10 Sobic.002G179400 DNA binding protein, putative, expressed -
11 Sobic.003G072200 zinc finger protein, putative, expressed K11978: E3 ubiquitin-protein ligase UBR3
12 Sobic.010G148932 - -
13 Sobic.004G051200 WD domain containing protein, putative, expressed -
14 Sobic.001G287500 heat shock protein DnaJ, putative, expressed K09533: DnaJ homolog subfamily C member 13
15 Sobic.002G429300 importin subunit beta, putative, expressed -
16 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
17 Sobic.001G191700 expressed protein -
18 Sobic.001G493700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed -
19 Sobic.003G259100 GPI transamidase component family protein, putative, expressed K05289: GPI-anchor transamidase subunit GAA1
20 Sobic.008G085300 hhH-GPD superfamily base excision DNA repair protein, expressed -


Gene co-expression network
sample Sobic001G137000 Sobic001G137000 Sobic008G092600 Sobic008G092600 Sobic001G137000--Sobic008G092600 Sobic007G098500 Sobic007G098500 Sobic001G137000--Sobic007G098500 Sobic003G233400 Sobic003G233400 Sobic001G137000--Sobic003G233400 Sobic003G312100 Sobic003G312100 Sobic001G137000--Sobic003G312100 Sobic001G117200 Sobic001G117200 Sobic001G137000--Sobic001G117200 Sobic002G396500 Sobic002G396500 Sobic001G137000--Sobic002G396500 Sobic001G050600 Sobic001G050600 Sobic001G137000--Sobic001G050600 Sobic008G098900 Sobic008G098900 Sobic001G137000--Sobic008G098900 Sobic008G099800 Sobic008G099800 Sobic001G137000--Sobic008G099800 Sobic008G092600--Sobic007G098500 Sobic002G147600 Sobic002G147600 Sobic008G092600--Sobic002G147600 Sobic008G092600--Sobic001G137000 Sobic004G040500 Sobic004G040500 Sobic008G092600--Sobic004G040500 Sobic003G072200 Sobic003G072200 Sobic008G092600--Sobic003G072200 Sobic008G092600--Sobic008G098900 Sobic008G085300 Sobic008G085300 Sobic008G092600--Sobic008G085300 Sobic008G092600--Sobic003G233400 Sobic008G092600--Sobic001G117200 Sobic007G098500--Sobic008G092600 Sobic007G098500--Sobic002G396500 Sobic010G105200 Sobic010G105200 Sobic007G098500--Sobic010G105200 Sobic007G098500--Sobic003G072200 Sobic007G098500--Sobic001G050600 Sobic007G098500--Sobic001G137000 Sobic007G098500--Sobic003G233400 Sobic001G287500 Sobic001G287500 Sobic007G098500--Sobic001G287500 Sobic006G265200 Sobic006G265200 Sobic007G098500--Sobic006G265200 Sobic003G233400--Sobic001G287500 Sobic003G233400--Sobic003G072200 Sobic003G233400--Sobic007G098500 Sobic003G233400--Sobic001G137000 Sobic003G233400--Sobic003G312100 Sobic003G233400--Sobic008G092600 Sobic003G233400--Sobic002G396500 Sobic002G179400 Sobic002G179400 Sobic003G233400--Sobic002G179400 Sobic004G051200 Sobic004G051200 Sobic003G233400--Sobic004G051200 Sobic010G148932 Sobic010G148932 Sobic003G312100--Sobic010G148932 Sobic003G312100--Sobic003G233400 Sobic003G312100--Sobic001G137000 Sobic007G019300 Sobic007G019300 Sobic003G312100--Sobic007G019300 Sobic003G312100--Sobic003G072200 Sobic002G397500 Sobic002G397500 Sobic003G312100--Sobic002G397500 Sobic001G004400 Sobic001G004400 Sobic003G312100--Sobic001G004400 Sobic004G248600 Sobic004G248600 Sobic003G312100--Sobic004G248600 Sobic003G312100--Sobic002G396500 Sobic001G117200--Sobic008G098900 Sobic003G408600 Sobic003G408600 Sobic001G117200--Sobic003G408600 Sobic002G430000 Sobic002G430000 Sobic001G117200--Sobic002G430000 Sobic001G540400 Sobic001G540400 Sobic001G117200--Sobic001G540400 Sobic001G117200--Sobic001G137000 Sobic004G113400 Sobic004G113400 Sobic001G117200--Sobic004G113400 Sobic001G542500 Sobic001G542500 Sobic001G117200--Sobic001G542500 Sobic001G058700 Sobic001G058700 Sobic001G117200--Sobic001G058700 Sobic001G117200--Sobic008G092600 Sobic002G396500--Sobic007G098500 Sobic010G001100 Sobic010G001100 Sobic002G396500--Sobic010G001100 Sobic002G396500--Sobic010G105200 Sobic002G396500--Sobic003G072200 Sobic002G396500--Sobic008G092600 Sobic002G396500--Sobic001G137000 Sobic002G396500--Sobic003G233400 Sobic002G396500--Sobic003G312100 Sobic009G109200 Sobic009G109200 Sobic002G396500--Sobic009G109200 Sobic001G050600--Sobic007G098500 Sobic001G037100 Sobic001G037100 Sobic001G050600--Sobic001G037100 Sobic001G050600--Sobic001G058700 Sobic001G219900 Sobic001G219900 Sobic001G050600--Sobic001G219900 Sobic007G172400 Sobic007G172400 Sobic001G050600--Sobic007G172400 Sobic001G050600--Sobic001G137000 Sobic001G280900 Sobic001G280900 Sobic001G050600--Sobic001G280900 Sobic001G050600--Sobic008G092600 Sobic003G259100 Sobic003G259100 Sobic001G050600--Sobic003G259100 Sobic001G370900 Sobic001G370900 Sobic008G098900--Sobic001G370900 Sobic008G098900--Sobic008G085300 Sobic008G098900--Sobic001G117200 Sobic003G205200 Sobic003G205200 Sobic008G098900--Sobic003G205200 Sobic005G001000 Sobic005G001000 Sobic008G098900--Sobic005G001000 Sobic008G098900--Sobic003G072200 Sobic005G162500 Sobic005G162500 Sobic008G098900--Sobic005G162500 Sobic002G042600 Sobic002G042600 Sobic008G098900--Sobic002G042600 Sobic004G276400 Sobic004G276400 Sobic008G098900--Sobic004G276400 Sobic006G012500 Sobic006G012500 Sobic008G099800--Sobic006G012500 Sobic001G534800 Sobic001G534800 Sobic008G099800--Sobic001G534800 Sobic004G135400 Sobic004G135400 Sobic008G099800--Sobic004G135400 Sobic001G347500 Sobic001G347500 Sobic008G099800--Sobic001G347500 Sobic001G281100 Sobic001G281100 Sobic008G099800--Sobic001G281100 Sobic008G099800--Sobic004G113400 Sobic004G039600 Sobic004G039600 Sobic008G099800--Sobic004G039600 Sobic008G099800--Sobic003G072200 Sobic001G065000 Sobic001G065000 Sobic008G099800--Sobic001G065000
Octagon: transcription factors


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