Gene annotation
Transcriptome id Sobic.002G430000.2,Sobic.002G430000.8,Sobic.002G430000.3,Sobic.002G430000.7
Synonym Sb02g043970
Functional annotation expressed protein
UniProt A0A1B6QGI6 , A0A1B6QGJ1 , A0A1W0W833 , A0A1W0W838
Pfam -
Panther DB PTHR10241 PTHR10241:SF25
NCBI CDD KOG1983; Tomosyn and related SNARE-interacting proteins
KEGG Orthology K08518; STXBP5, syntaxin-binding protein 5
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05570 : transducin family protein / WD-40 repeat family protein
RAP-DB (Rice) LOC_Os07g49300.1 : expressed protein
MaizeGDB (Corn) Zm00025a049267 , Zm00025a046666 , Zm00025a032261
Brachypodium KQK14480 , KQK14481 , KQK14482 , KQK14484 , KQK14487 , KQK14483 , KQK14485 , KQK14486
Barley HORVU2Hr1G013900.9 , HORVU2Hr1G013900.8 , HORVU2Hr1G013900.5 , HORVU2Hr1G013900.4 , HORVU2Hr1G013900.7 , HORVU2Hr1G013900.6 , HORVU2Hr1G013900.1 , HORVU2Hr1G013900.3 , HORVU2Hr1G013900.2 , HORVU2Hr1G013900.20 , HORVU2Hr1G013900.21 , HORVU2Hr1G013900.22 , HORVU2Hr1G013900.19 , HORVU2Hr1G013900.18 , HORVU2Hr1G013900.11 , HORVU2Hr1G013900.10 , HORVU2Hr1G013900.13 , HORVU2Hr1G013900.12 , HORVU2Hr1G013900.15 , HORVU2Hr1G013900.14 , HORVU2Hr1G013900.17 , HORVU2Hr1G013900.16
Wheat TraesCS2B02G099700 , TraesCS2B02G099700 , TraesCS2B02G099700 , TraesCS2B02G099700 , TraesCS2D02G082900 , TraesCS2D02G082900 , TraesCS2D02G082900 , TraesCS2A02G085000 , TraesCS2A02G085000 , TraesCS2A02G085000 , TraesCS2A02G085000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
2 Sobic.001G117200 AGC_AGC_other_GWLd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
3 Sobic.004G355000 SAC9, putative, expressed -
4 Sobic.008G098900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
5 Sobic.001G016700 ion channel DMI1-like, chloroplast precursor, putative, expressed -
6 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
7 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
8 Sobic.008G092600 ubiquitin-protein ligase 1, putative, expressed K10592: HUWE1, MULE, E3 ubiquitin-protein ligase HUWE1
9 Sobic.003G110000 TBC domain containing protein, expressed -
10 Sobic.008G099800 expressed protein -
11 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
12 Sobic.001G281100 START domain containing protein, expressed -
13 Sobic.004G004200 expressed protein -
14 Sobic.001G058700 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
15 Sobic.002G270500 UBX domain-containing protein, putative, expressed -
16 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
17 Sobic.001G137000 aberrant pollen transmission 1, putative, expressed -
18 Sobic.004G329400 formin, putative, expressed -
19 Sobic.010G004100 expressed protein -
20 Sobic.010G279800 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase


Gene co-expression network
sample Sobic002G430000 Sobic002G430000 Sobic001G207400 Sobic001G207400 Sobic002G430000--Sobic001G207400 Sobic001G117200 Sobic001G117200 Sobic002G430000--Sobic001G117200 Sobic004G355000 Sobic004G355000 Sobic002G430000--Sobic004G355000 Sobic008G098900 Sobic008G098900 Sobic002G430000--Sobic008G098900 Sobic001G016700 Sobic001G016700 Sobic002G430000--Sobic001G016700 Sobic004G113400 Sobic004G113400 Sobic002G430000--Sobic004G113400 Sobic010G139600 Sobic010G139600 Sobic002G430000--Sobic010G139600 Sobic008G092600 Sobic008G092600 Sobic002G430000--Sobic008G092600 Sobic003G110000 Sobic003G110000 Sobic002G430000--Sobic003G110000 Sobic001G207400--Sobic004G355000 Sobic001G207400--Sobic002G430000 Sobic002G270500 Sobic002G270500 Sobic001G207400--Sobic002G270500 Sobic006G204900 Sobic006G204900 Sobic001G207400--Sobic006G204900 Sobic005G157000 Sobic005G157000 Sobic001G207400--Sobic005G157000 Sobic001G207400--Sobic010G139600 Sobic002G111000 Sobic002G111000 Sobic001G207400--Sobic002G111000 Sobic003G322700 Sobic003G322700 Sobic001G207400--Sobic003G322700 Sobic001G050200 Sobic001G050200 Sobic001G207400--Sobic001G050200 Sobic001G117200--Sobic008G098900 Sobic003G408600 Sobic003G408600 Sobic001G117200--Sobic003G408600 Sobic001G117200--Sobic002G430000 Sobic001G540400 Sobic001G540400 Sobic001G117200--Sobic001G540400 Sobic001G137000 Sobic001G137000 Sobic001G117200--Sobic001G137000 Sobic001G117200--Sobic004G113400 Sobic001G542500 Sobic001G542500 Sobic001G117200--Sobic001G542500 Sobic001G058700 Sobic001G058700 Sobic001G117200--Sobic001G058700 Sobic001G117200--Sobic008G092600 Sobic004G355000--Sobic001G207400 Sobic004G355000--Sobic002G430000 Sobic001G248300 Sobic001G248300 Sobic004G355000--Sobic001G248300 Sobic005G001000 Sobic005G001000 Sobic004G355000--Sobic005G001000 Sobic004G329400 Sobic004G329400 Sobic004G355000--Sobic004G329400 Sobic004G355000--Sobic005G157000 Sobic004G355000--Sobic003G322700 Sobic004G355000--Sobic004G113400 Sobic009G010600 Sobic009G010600 Sobic004G355000--Sobic009G010600 Sobic001G370900 Sobic001G370900 Sobic008G098900--Sobic001G370900 Sobic008G085300 Sobic008G085300 Sobic008G098900--Sobic008G085300 Sobic008G098900--Sobic001G117200 Sobic003G205200 Sobic003G205200 Sobic008G098900--Sobic003G205200 Sobic008G098900--Sobic005G001000 Sobic003G072200 Sobic003G072200 Sobic008G098900--Sobic003G072200 Sobic005G162500 Sobic005G162500 Sobic008G098900--Sobic005G162500 Sobic002G042600 Sobic002G042600 Sobic008G098900--Sobic002G042600 Sobic004G276400 Sobic004G276400 Sobic008G098900--Sobic004G276400 Sobic001G016700--Sobic002G430000 Sobic001G016700--Sobic002G111000 Sobic001G016700--Sobic001G207400 Sobic001G016700--Sobic010G139600 Sobic001G016700--Sobic003G110000 Sobic001G390800 Sobic001G390800 Sobic001G016700--Sobic001G390800 Sobic001G016700--Sobic006G204900 Sobic001G016700--Sobic003G322700 Sobic003G086900 Sobic003G086900 Sobic001G016700--Sobic003G086900 Sobic004G113400--Sobic009G010600 Sobic004G113400--Sobic003G408600 Sobic004G113400--Sobic004G329400 Sobic004G113400--Sobic001G058700 Sobic008G099800 Sobic008G099800 Sobic004G113400--Sobic008G099800 Sobic001G178700 Sobic001G178700 Sobic004G113400--Sobic001G178700 Sobic004G113400--Sobic001G117200 Sobic001G534800 Sobic001G534800 Sobic004G113400--Sobic001G534800 Sobic004G113400--Sobic002G430000 Sobic007G075400 Sobic007G075400 Sobic010G139600--Sobic007G075400 Sobic002G146300 Sobic002G146300 Sobic010G139600--Sobic002G146300 Sobic010G139600--Sobic003G205200 Sobic010G139600--Sobic008G098900 Sobic003G313500 Sobic003G313500 Sobic010G139600--Sobic003G313500 Sobic010G139600--Sobic005G001000 Sobic001G194200 Sobic001G194200 Sobic010G139600--Sobic001G194200 Sobic003G422500 Sobic003G422500 Sobic010G139600--Sobic003G422500 Sobic010G139600--Sobic001G370900 Sobic007G098500 Sobic007G098500 Sobic008G092600--Sobic007G098500 Sobic002G147600 Sobic002G147600 Sobic008G092600--Sobic002G147600 Sobic008G092600--Sobic001G137000 Sobic004G040500 Sobic004G040500 Sobic008G092600--Sobic004G040500 Sobic008G092600--Sobic003G072200 Sobic008G092600--Sobic008G098900 Sobic008G092600--Sobic008G085300 Sobic003G233400 Sobic003G233400 Sobic008G092600--Sobic003G233400 Sobic008G092600--Sobic001G117200 Sobic003G110000--Sobic008G098900 Sobic001G085300 Sobic001G085300 Sobic003G110000--Sobic001G085300 Sobic003G166750 Sobic003G166750 Sobic003G110000--Sobic003G166750 Sobic002G275700 Sobic002G275700 Sobic003G110000--Sobic002G275700 Sobic003G110000--Sobic002G430000 Sobic003G110000--Sobic001G194200 Sobic003G110000--Sobic001G370900 Sobic009G131300 Sobic009G131300 Sobic003G110000--Sobic009G131300 Sobic003G110000--Sobic001G117200
Octagon: transcription factors


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