Gene annotation
Transcriptome id Sobic.001G281100.1,Sobic.001G281100.2
Synonym EDR2, Sb01g027640
Functional annotation START domain containing protein, expressed
UniProt A0A1B6QLJ4 , C5WQL1
Pfam PF00169 PF01852 PF07059
Panther DB PTHR12136 PTHR12136:SF47
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008289; lipid binding


Orthologs (automatic annotation)
TAIR AT4G19040 : ENHANCED DISEASE RESISTANCE 2
RAP-DB (Rice) LOC_Os10g31770.1 : START domain containing protein, expressed
MaizeGDB (Corn) Zm00025a018092
Brachypodium PNT65658 , KQJ96933
Barley HORVU7Hr1G117780.11 , HORVU7Hr1G117780.10 , HORVU7Hr1G117780.13 , HORVU7Hr1G117780.12 , HORVU7Hr1G117780.5 , HORVU7Hr1G117780.4 , HORVU7Hr1G117780.7 , HORVU7Hr1G117780.6 , HORVU7Hr1G117780.1 , HORVU7Hr1G117780.3 , HORVU7Hr1G117780.2 , HORVU7Hr1G117780.9 , HORVU7Hr1G117780.8
Wheat TraesCS7D02G523200 , TraesCS7D02G523200 , TraesCS7B02G458700 , TraesCS7B02G458700 , TraesCS7B02G458700 , TraesCS7A02G538600 , TraesCS7A02G538600 , TraesCS7A02G538600 , TraesCS7A02G538600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G534800 Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@adapitin protein, putative, expressed K11824: AP-2 complex subunit alpha
2 Sobic.004G004300 expressed protein -
3 Sobic.001G065000 expressed protein -
4 Sobic.005G026200 HEAT repeat family protein, putative, expressed K11886: proteasome component ECM29
5 Sobic.008G099800 expressed protein -
6 Sobic.003G229500 ZOS12-01 - C2H2 zinc finger protein, expressed -
7 Sobic.006G012500 protein transport protein Sec24-like, putative, expressed K14007: protein transport protein SEC24
8 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
9 Sobic.010G275500 EF hand family protein, putative, expressed -
10 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
11 Sobic.004G351100 signal peptide peptidase-like 2B, putative, expressed K09597: signal peptide peptidase-like 2B
12 Sobic.001G415300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
13 Sobic.009G010600 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
14 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
15 Sobic.006G131000 expressed protein K11968: ariadne-1
16 Sobic.008G132600 expressed protein -
17 Sobic.003G101400 transcriptional repressor, putative, expressed K11644: paired amphipathic helix protein Sin3a
18 Sobic.001G347500 expressed protein -
19 Sobic.001G117200 AGC_AGC_other_GWLd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
20 Sobic.010G053800 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1


Gene co-expression network
sample Sobic001G281100 Sobic001G281100 Sobic001G534800 Sobic001G534800 Sobic001G281100--Sobic001G534800 Sobic004G004300 Sobic004G004300 Sobic001G281100--Sobic004G004300 Sobic001G065000 Sobic001G065000 Sobic001G281100--Sobic001G065000 Sobic005G026200 Sobic005G026200 Sobic001G281100--Sobic005G026200 Sobic008G099800 Sobic008G099800 Sobic001G281100--Sobic008G099800 Sobic003G229500 Sobic003G229500 Sobic001G281100--Sobic003G229500 Sobic006G012500 Sobic006G012500 Sobic001G281100--Sobic006G012500 Sobic004G072100 Sobic004G072100 Sobic001G281100--Sobic004G072100 Sobic010G275500 Sobic010G275500 Sobic001G281100--Sobic010G275500 Sobic001G534800--Sobic001G281100 Sobic001G534800--Sobic008G099800 Sobic001G534800--Sobic004G004300 Sobic004G135400 Sobic004G135400 Sobic001G534800--Sobic004G135400 Sobic005G003300 Sobic005G003300 Sobic001G534800--Sobic005G003300 Sobic001G534800--Sobic005G026200 Sobic001G534800--Sobic006G012500 Sobic004G113400 Sobic004G113400 Sobic001G534800--Sobic004G113400 Sobic001G534800--Sobic001G065000 Sobic004G004300--Sobic001G281100 Sobic004G004300--Sobic005G026200 Sobic004G004300--Sobic001G534800 Sobic006G126100 Sobic006G126100 Sobic004G004300--Sobic006G126100 Sobic001G117200 Sobic001G117200 Sobic004G004300--Sobic001G117200 Sobic004G004200 Sobic004G004200 Sobic004G004300--Sobic004G004200 Sobic001G415300 Sobic001G415300 Sobic004G004300--Sobic001G415300 Sobic004G004300--Sobic010G275500 Sobic004G004300--Sobic005G003300 Sobic001G114000 Sobic001G114000 Sobic001G065000--Sobic001G114000 Sobic001G065000--Sobic001G281100 Sobic001G065000--Sobic006G012500 Sobic001G065000--Sobic001G534800 Sobic005G118600 Sobic005G118600 Sobic001G065000--Sobic005G118600 Sobic001G065000--Sobic008G099800 Sobic003G093800 Sobic003G093800 Sobic001G065000--Sobic003G093800 Sobic006G037700 Sobic006G037700 Sobic001G065000--Sobic006G037700 Sobic001G065000--Sobic003G229500 Sobic005G026200--Sobic004G004300 Sobic005G026200--Sobic001G534800 Sobic005G026200--Sobic001G281100 Sobic005G026200--Sobic005G003300 Sobic002G397500 Sobic002G397500 Sobic005G026200--Sobic002G397500 Sobic010G053800 Sobic010G053800 Sobic005G026200--Sobic010G053800 Sobic003G072200 Sobic003G072200 Sobic005G026200--Sobic003G072200 Sobic005G026200--Sobic001G065000 Sobic005G026200--Sobic004G113400 Sobic008G099800--Sobic006G012500 Sobic008G099800--Sobic001G534800 Sobic008G099800--Sobic004G135400 Sobic001G347500 Sobic001G347500 Sobic008G099800--Sobic001G347500 Sobic008G099800--Sobic001G281100 Sobic008G099800--Sobic004G113400 Sobic004G039600 Sobic004G039600 Sobic008G099800--Sobic004G039600 Sobic008G099800--Sobic003G072200 Sobic008G099800--Sobic001G065000 Sobic008G132600 Sobic008G132600 Sobic003G229500--Sobic008G132600 Sobic007G062800 Sobic007G062800 Sobic003G229500--Sobic007G062800 Sobic003G101400 Sobic003G101400 Sobic003G229500--Sobic003G101400 Sobic001G196500 Sobic001G196500 Sobic003G229500--Sobic001G196500 Sobic002G042600 Sobic002G042600 Sobic003G229500--Sobic002G042600 Sobic001G363500 Sobic001G363500 Sobic003G229500--Sobic001G363500 Sobic003G229500--Sobic001G347500 Sobic003G229500--Sobic003G072200 Sobic001G540400 Sobic001G540400 Sobic003G229500--Sobic001G540400 Sobic006G012500--Sobic004G039600 Sobic006G012500--Sobic010G053800 Sobic006G012500--Sobic008G099800 Sobic006G012500--Sobic010G275500 Sobic006G012500--Sobic004G072100 Sobic006G012500--Sobic001G534800 Sobic006G012500--Sobic001G065000 Sobic007G132100 Sobic007G132100 Sobic006G012500--Sobic007G132100 Sobic007G218000 Sobic007G218000 Sobic006G012500--Sobic007G218000 Sobic004G072100--Sobic007G218000 Sobic004G072100--Sobic010G053800 Sobic004G072100--Sobic010G275500 Sobic004G072100--Sobic007G132100 Sobic004G072100--Sobic006G012500 Sobic010G069100 Sobic010G069100 Sobic004G072100--Sobic010G069100 Sobic010G116600 Sobic010G116600 Sobic004G072100--Sobic010G116600 Sobic008G047800 Sobic008G047800 Sobic004G072100--Sobic008G047800 Sobic001G155000 Sobic001G155000 Sobic004G072100--Sobic001G155000 Sobic010G275500--Sobic010G053800 Sobic010G275500--Sobic004G072100 Sobic010G275500--Sobic006G012500 Sobic010G275500--Sobic001G155000 Sobic010G275500--Sobic010G116600 Sobic010G275500--Sobic010G069100 Sobic009G119000 Sobic009G119000 Sobic010G275500--Sobic009G119000 Sobic007G183900 Sobic007G183900 Sobic010G275500--Sobic007G183900 Sobic010G275500--Sobic002G397500
Octagon: transcription factors


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