Gene annotation
Transcriptome id Sobic.001G065000.1,Sobic.001G065000.2
Synonym Sb01g005910
Functional annotation expressed protein
UniProt C5WY65
Pfam PF12739
Panther DB PTHR12975 PTHR12975:SF6
NCBI CDD KOG1938; Protein with predicted involvement in meiosis (GSG1)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G16280 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os03g57300.1 : expressed protein
MaizeGDB (Corn) Zm00025a008480
Brachypodium KQK12848 , KQK12849 , KQK12850
Barley HORVU5Hr1G103600.19 , HORVU5Hr1G103600.18 , HORVU5Hr1G103600.17 , HORVU5Hr1G103600.16 , HORVU5Hr1G103600.15 , HORVU5Hr1G103600.14 , HORVU5Hr1G103600.13 , HORVU5Hr1G103600.12 , HORVU5Hr1G103600.11 , HORVU5Hr1G103600.10 , HORVU5Hr1G103600.26 , HORVU5Hr1G103600.27 , HORVU5Hr1G103600.24 , HORVU5Hr1G103600.25 , HORVU5Hr1G103600.22 , HORVU5Hr1G103600.23 , HORVU5Hr1G103600.20 , HORVU5Hr1G103600.21 , HORVU5Hr1G103600.28 , HORVU5Hr1G103600.29 , HORVU5Hr1G103600.7 , HORVU5Hr1G103600.6 , HORVU5Hr1G103600.5 , HORVU5Hr1G103600.4 , HORVU5Hr1G103600.3 , HORVU5Hr1G103600.1 , HORVU5Hr1G103600.9 , HORVU5Hr1G103600.8
Wheat TraesCS5B02G427500 , TraesCS5B02G427500 , TraesCS5B02G427500 , TraesCS5A02G425500 , TraesCSU02G076500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G114000 expressed protein -
2 Sobic.001G281100 START domain containing protein, expressed -
3 Sobic.006G012500 protein transport protein Sec24-like, putative, expressed K14007: protein transport protein SEC24
4 Sobic.001G534800 Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@adapitin protein, putative, expressed K11824: AP-2 complex subunit alpha
5 Sobic.005G118600 NB-ARC domain containing protein, expressed -
6 Sobic.008G099800 expressed protein -
7 Sobic.003G093800 - K03254: translation initiation factor 3 subunit A
8 Sobic.006G037700 phosphoribulokinase/Uridine kinase family protein, expressed -
9 Sobic.003G229500 ZOS12-01 - C2H2 zinc finger protein, expressed -
10 Sobic.003G101400 transcriptional repressor, putative, expressed K11644: paired amphipathic helix protein Sin3a
11 Sobic.004G347400 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
12 Sobic.010G116600 FHA domain containing protein, putative, expressed -
13 Sobic.001G347500 expressed protein -
14 Sobic.003G118200 phosphoadenosine phosphosulfate, putative, expressed -
15 Sobic.004G051200 WD domain containing protein, putative, expressed -
16 Sobic.001G109800 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
17 Sobic.003G195500 SEY1, putative, expressed -
18 Sobic.005G026200 HEAT repeat family protein, putative, expressed K11886: proteasome component ECM29
19 Sobic.004G264400 TBC domain containing protein, expressed -
20 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10


Gene co-expression network
sample Sobic001G065000 Sobic001G065000 Sobic001G114000 Sobic001G114000 Sobic001G065000--Sobic001G114000 Sobic001G281100 Sobic001G281100 Sobic001G065000--Sobic001G281100 Sobic006G012500 Sobic006G012500 Sobic001G065000--Sobic006G012500 Sobic001G534800 Sobic001G534800 Sobic001G065000--Sobic001G534800 Sobic005G118600 Sobic005G118600 Sobic001G065000--Sobic005G118600 Sobic008G099800 Sobic008G099800 Sobic001G065000--Sobic008G099800 Sobic003G093800 Sobic003G093800 Sobic001G065000--Sobic003G093800 Sobic006G037700 Sobic006G037700 Sobic001G065000--Sobic006G037700 Sobic003G229500 Sobic003G229500 Sobic001G065000--Sobic003G229500 Sobic007G217000 Sobic007G217000 Sobic001G114000--Sobic007G217000 Sobic002G112700 Sobic002G112700 Sobic001G114000--Sobic002G112700 Sobic001G114000--Sobic001G065000 Sobic004G067700 Sobic004G067700 Sobic001G114000--Sobic004G067700 Sobic009G166300 Sobic009G166300 Sobic001G114000--Sobic009G166300 Sobic008G047800 Sobic008G047800 Sobic001G114000--Sobic008G047800 Sobic004G072100 Sobic004G072100 Sobic001G114000--Sobic004G072100 Sobic001G114000--Sobic005G118600 Sobic009G126400 Sobic009G126400 Sobic001G114000--Sobic009G126400 Sobic001G281100--Sobic001G534800 Sobic004G004300 Sobic004G004300 Sobic001G281100--Sobic004G004300 Sobic001G281100--Sobic001G065000 Sobic005G026200 Sobic005G026200 Sobic001G281100--Sobic005G026200 Sobic001G281100--Sobic008G099800 Sobic001G281100--Sobic003G229500 Sobic001G281100--Sobic006G012500 Sobic001G281100--Sobic004G072100 Sobic010G275500 Sobic010G275500 Sobic001G281100--Sobic010G275500 Sobic004G039600 Sobic004G039600 Sobic006G012500--Sobic004G039600 Sobic010G053800 Sobic010G053800 Sobic006G012500--Sobic010G053800 Sobic006G012500--Sobic008G099800 Sobic006G012500--Sobic010G275500 Sobic006G012500--Sobic004G072100 Sobic006G012500--Sobic001G534800 Sobic006G012500--Sobic001G065000 Sobic007G132100 Sobic007G132100 Sobic006G012500--Sobic007G132100 Sobic007G218000 Sobic007G218000 Sobic006G012500--Sobic007G218000 Sobic001G534800--Sobic001G281100 Sobic001G534800--Sobic008G099800 Sobic001G534800--Sobic004G004300 Sobic004G135400 Sobic004G135400 Sobic001G534800--Sobic004G135400 Sobic005G003300 Sobic005G003300 Sobic001G534800--Sobic005G003300 Sobic001G534800--Sobic005G026200 Sobic001G534800--Sobic006G012500 Sobic004G113400 Sobic004G113400 Sobic001G534800--Sobic004G113400 Sobic001G534800--Sobic001G065000 Sobic003G059750 Sobic003G059750 Sobic005G118600--Sobic003G059750 Sobic008G084700 Sobic008G084700 Sobic005G118600--Sobic008G084700 Sobic003G225700 Sobic003G225700 Sobic005G118600--Sobic003G225700 Sobic005G118600--Sobic001G065000 Sobic005G118600--Sobic009G166300 Sobic008G153000 Sobic008G153000 Sobic005G118600--Sobic008G153000 Sobic005G118600--Sobic001G114000 Sobic002G071500 Sobic002G071500 Sobic005G118600--Sobic002G071500 Sobic007G103600 Sobic007G103600 Sobic005G118600--Sobic007G103600 Sobic008G099800--Sobic006G012500 Sobic008G099800--Sobic001G534800 Sobic008G099800--Sobic004G135400 Sobic001G347500 Sobic001G347500 Sobic008G099800--Sobic001G347500 Sobic008G099800--Sobic001G281100 Sobic008G099800--Sobic004G113400 Sobic008G099800--Sobic004G039600 Sobic003G072200 Sobic003G072200 Sobic008G099800--Sobic003G072200 Sobic008G099800--Sobic001G065000 Sobic010G116600 Sobic010G116600 Sobic003G093800--Sobic010G116600 Sobic003G093800--Sobic001G065000 Sobic003G408600 Sobic003G408600 Sobic003G093800--Sobic003G408600 Sobic001G536400 Sobic001G536400 Sobic003G093800--Sobic001G536400 Sobic001G058700 Sobic001G058700 Sobic003G093800--Sobic001G058700 Sobic002G299700 Sobic002G299700 Sobic003G093800--Sobic002G299700 Sobic009G044800 Sobic009G044800 Sobic003G093800--Sobic009G044800 Sobic003G093800--Sobic002G071500 Sobic009G249700 Sobic009G249700 Sobic003G093800--Sobic009G249700 Sobic004G051200 Sobic004G051200 Sobic006G037700--Sobic004G051200 Sobic006G037700--Sobic001G065000 Sobic006G037700--Sobic008G099800 Sobic006G037700--Sobic003G072200 Sobic007G098500 Sobic007G098500 Sobic006G037700--Sobic007G098500 Sobic006G035300 Sobic006G035300 Sobic006G037700--Sobic006G035300 Sobic001G050600 Sobic001G050600 Sobic006G037700--Sobic001G050600 Sobic003G259100 Sobic003G259100 Sobic006G037700--Sobic003G259100 Sobic006G037700--Sobic001G058700 Sobic008G132600 Sobic008G132600 Sobic003G229500--Sobic008G132600 Sobic007G062800 Sobic007G062800 Sobic003G229500--Sobic007G062800 Sobic003G101400 Sobic003G101400 Sobic003G229500--Sobic003G101400 Sobic001G196500 Sobic001G196500 Sobic003G229500--Sobic001G196500 Sobic002G042600 Sobic002G042600 Sobic003G229500--Sobic002G042600 Sobic001G363500 Sobic001G363500 Sobic003G229500--Sobic001G363500 Sobic003G229500--Sobic001G347500 Sobic003G229500--Sobic003G072200 Sobic001G540400 Sobic001G540400 Sobic003G229500--Sobic001G540400
Octagon: transcription factors


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