Gene annotation
Transcriptome id Sobic.004G355000.1
Synonym SAC9
Functional annotation SAC9, putative, expressed
UniProt A0A1Z5RQQ4
Pfam PF00397 PF02383
Panther DB PTHR11200 PTHR11200:SF119
NCBI CDD KOG1888; Putative phosphoinositide phosphatase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G59770 : sacI homology domain-containing protein / WW domain-containing protein
RAP-DB (Rice) LOC_Os01g25330.3 : SAC9, putative, expressed
MaizeGDB (Corn) Zm00025a034948
Brachypodium KQK06603 , KQK06602
Barley HORVU5Hr1G003820.4 , HORVU5Hr1G003820.5 , HORVU5Hr1G003820.1 , HORVU5Hr1G003820.2 , HORVU5Hr1G003820.3
Wheat TraesCS5B02G007800 , TraesCS5D02G015000 , TraesCS5A02G010200 , TraesCS5A02G010200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
2 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
3 Sobic.001G248300 OsPOP21 - Putative Prolyl Oligopeptidase homologue, expressed K01303: acylaminoacyl-peptidase
4 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
5 Sobic.004G329400 formin, putative, expressed -
6 Sobic.005G157000 expressed protein -
7 Sobic.003G322700 expressed protein -
8 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
9 Sobic.009G010600 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
10 Sobic.007G075400 expressed protein -
11 Sobic.001G058700 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
12 Sobic.002G270500 UBX domain-containing protein, putative, expressed -
13 Sobic.004G347400 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
14 Sobic.008G132600 expressed protein -
15 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
16 Sobic.001G050200 expressed protein -
17 Sobic.009G027300 MYB family transcription factor, putative, expressed K04650: NCOR1, nuclear receptor co-repressor 1
18 Sobic.001G438600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dihydrodipicolinate reductase, putative, expressed K00215: 4-hydroxy-tetrahydrodipicolinate reductase
19 Sobic.002G008900 sister chromatid cohesion 2, putative, expressed K06672: SCC2, cohesin loading factor subunit SCC2
20 Sobic.009G191000 MATH domain containing protein, expressed -


Gene co-expression network
sample Sobic004G355000 Sobic004G355000 Sobic001G207400 Sobic001G207400 Sobic004G355000--Sobic001G207400 Sobic002G430000 Sobic002G430000 Sobic004G355000--Sobic002G430000 Sobic001G248300 Sobic001G248300 Sobic004G355000--Sobic001G248300 Sobic005G001000 Sobic005G001000 Sobic004G355000--Sobic005G001000 Sobic004G329400 Sobic004G329400 Sobic004G355000--Sobic004G329400 Sobic005G157000 Sobic005G157000 Sobic004G355000--Sobic005G157000 Sobic003G322700 Sobic003G322700 Sobic004G355000--Sobic003G322700 Sobic004G113400 Sobic004G113400 Sobic004G355000--Sobic004G113400 Sobic009G010600 Sobic009G010600 Sobic004G355000--Sobic009G010600 Sobic001G207400--Sobic004G355000 Sobic001G207400--Sobic002G430000 Sobic002G270500 Sobic002G270500 Sobic001G207400--Sobic002G270500 Sobic006G204900 Sobic006G204900 Sobic001G207400--Sobic006G204900 Sobic001G207400--Sobic005G157000 Sobic010G139600 Sobic010G139600 Sobic001G207400--Sobic010G139600 Sobic002G111000 Sobic002G111000 Sobic001G207400--Sobic002G111000 Sobic001G207400--Sobic003G322700 Sobic001G050200 Sobic001G050200 Sobic001G207400--Sobic001G050200 Sobic002G430000--Sobic001G207400 Sobic001G117200 Sobic001G117200 Sobic002G430000--Sobic001G117200 Sobic002G430000--Sobic004G355000 Sobic008G098900 Sobic008G098900 Sobic002G430000--Sobic008G098900 Sobic001G016700 Sobic001G016700 Sobic002G430000--Sobic001G016700 Sobic002G430000--Sobic004G113400 Sobic002G430000--Sobic010G139600 Sobic008G092600 Sobic008G092600 Sobic002G430000--Sobic008G092600 Sobic003G110000 Sobic003G110000 Sobic002G430000--Sobic003G110000 Sobic001G248300--Sobic004G355000 Sobic002G169900 Sobic002G169900 Sobic001G248300--Sobic002G169900 Sobic001G178700 Sobic001G178700 Sobic001G248300--Sobic001G178700 Sobic004G052900 Sobic004G052900 Sobic001G248300--Sobic004G052900 Sobic001G248300--Sobic005G001000 Sobic009G094300 Sobic009G094300 Sobic001G248300--Sobic009G094300 Sobic010G112000 Sobic010G112000 Sobic001G248300--Sobic010G112000 Sobic001G248300--Sobic004G329400 Sobic001G248300--Sobic004G113400 Sobic001G194200 Sobic001G194200 Sobic005G001000--Sobic001G194200 Sobic002G008900 Sobic002G008900 Sobic005G001000--Sobic002G008900 Sobic001G370900 Sobic001G370900 Sobic005G001000--Sobic001G370900 Sobic003G205200 Sobic003G205200 Sobic005G001000--Sobic003G205200 Sobic004G291900 Sobic004G291900 Sobic005G001000--Sobic004G291900 Sobic003G186000 Sobic003G186000 Sobic005G001000--Sobic003G186000 Sobic008G001200 Sobic008G001200 Sobic005G001000--Sobic008G001200 Sobic003G422500 Sobic003G422500 Sobic005G001000--Sobic003G422500 Sobic009G256400 Sobic009G256400 Sobic005G001000--Sobic009G256400 Sobic004G329400--Sobic004G113400 Sobic009G027300 Sobic009G027300 Sobic004G329400--Sobic009G027300 Sobic004G329400--Sobic005G157000 Sobic001G058700 Sobic001G058700 Sobic004G329400--Sobic001G058700 Sobic004G329400--Sobic004G355000 Sobic004G269200 Sobic004G269200 Sobic004G329400--Sobic004G269200 Sobic007G024700 Sobic007G024700 Sobic004G329400--Sobic007G024700 Sobic007G172400 Sobic007G172400 Sobic004G329400--Sobic007G172400 Sobic003G408600 Sobic003G408600 Sobic004G329400--Sobic003G408600 Sobic005G157000--Sobic004G329400 Sobic005G157000--Sobic001G207400 Sobic005G157000--Sobic004G355000 Sobic005G157000--Sobic007G024700 Sobic005G157000--Sobic004G269200 Sobic005G157000--Sobic002G270500 Sobic005G157000--Sobic004G113400 Sobic005G157000--Sobic009G094300 Sobic005G157000--Sobic002G430000 Sobic002G266000 Sobic002G266000 Sobic003G322700--Sobic002G266000 Sobic003G322700--Sobic006G204900 Sobic010G001500 Sobic010G001500 Sobic003G322700--Sobic010G001500 Sobic003G322700--Sobic004G355000 Sobic003G322700--Sobic001G207400 Sobic003G355600 Sobic003G355600 Sobic003G322700--Sobic003G355600 Sobic006G087700 Sobic006G087700 Sobic003G322700--Sobic006G087700 Sobic006G199000 Sobic006G199000 Sobic003G322700--Sobic006G199000 Sobic004G034600 Sobic004G034600 Sobic003G322700--Sobic004G034600 Sobic004G113400--Sobic009G010600 Sobic004G113400--Sobic003G408600 Sobic004G113400--Sobic004G329400 Sobic004G113400--Sobic001G058700 Sobic008G099800 Sobic008G099800 Sobic004G113400--Sobic008G099800 Sobic004G113400--Sobic001G178700 Sobic004G113400--Sobic001G117200 Sobic001G534800 Sobic001G534800 Sobic004G113400--Sobic001G534800 Sobic004G113400--Sobic002G430000 Sobic009G010600--Sobic004G113400 Sobic001G474600 Sobic001G474600 Sobic009G010600--Sobic001G474600 Sobic009G010600--Sobic001G178700 Sobic009G010600--Sobic001G058700 Sobic001G281100 Sobic001G281100 Sobic009G010600--Sobic001G281100 Sobic009G010600--Sobic004G355000 Sobic009G010600--Sobic004G329400 Sobic002G427050 Sobic002G427050 Sobic009G010600--Sobic002G427050 Sobic005G026200 Sobic005G026200 Sobic009G010600--Sobic005G026200
Octagon: transcription factors


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