Gene annotation
Transcriptome id Sobic.005G157000.1,Sobic.005G157000.2
Synonym
Functional annotation expressed protein
UniProt A0A1B6PSS8
Pfam -
Panther DB PTHR34560 PTHR34560:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G06440 : -
RAP-DB (Rice) LOC_Os11g36070.2,LOC_Os11g36070.1 : expressed protein
MaizeGDB (Corn) Zm00025a015775 , Zm00025a033838
Brachypodium KQJ86894 , KQJ88171 , PNT62793
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G157000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G329400 formin, putative, expressed -
2 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
3 Sobic.004G355000 SAC9, putative, expressed -
4 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
5 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
6 Sobic.002G270500 UBX domain-containing protein, putative, expressed -
7 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
8 Sobic.009G094300 emp24/gp25L/p24 family protein, putative, expressed -
9 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
10 Sobic.002G419800 structural constituent of ribosome, putative, expressed -
11 Sobic.009G010600 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
12 Sobic.004G347400 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
13 Sobic.007G075400 expressed protein -
14 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
15 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
16 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
17 Sobic.003G422500 expressed protein -
18 Sobic.001G050200 expressed protein -
19 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
20 Sobic.004G331100 WD domain and HEAT domain containing protein, putative, expressed K08333: PIK3R4, phosphoinositide-3-kinase, regulatory subunit 4


Gene co-expression network
sample Sobic005G157000 Sobic005G157000 Sobic004G329400 Sobic004G329400 Sobic005G157000--Sobic004G329400 Sobic001G207400 Sobic001G207400 Sobic005G157000--Sobic001G207400 Sobic004G355000 Sobic004G355000 Sobic005G157000--Sobic004G355000 Sobic007G024700 Sobic007G024700 Sobic005G157000--Sobic007G024700 Sobic004G269200 Sobic004G269200 Sobic005G157000--Sobic004G269200 Sobic002G270500 Sobic002G270500 Sobic005G157000--Sobic002G270500 Sobic004G113400 Sobic004G113400 Sobic005G157000--Sobic004G113400 Sobic009G094300 Sobic009G094300 Sobic005G157000--Sobic009G094300 Sobic002G430000 Sobic002G430000 Sobic005G157000--Sobic002G430000 Sobic004G329400--Sobic004G113400 Sobic009G027300 Sobic009G027300 Sobic004G329400--Sobic009G027300 Sobic004G329400--Sobic005G157000 Sobic001G058700 Sobic001G058700 Sobic004G329400--Sobic001G058700 Sobic004G329400--Sobic004G355000 Sobic004G329400--Sobic004G269200 Sobic004G329400--Sobic007G024700 Sobic007G172400 Sobic007G172400 Sobic004G329400--Sobic007G172400 Sobic003G408600 Sobic003G408600 Sobic004G329400--Sobic003G408600 Sobic001G207400--Sobic004G355000 Sobic001G207400--Sobic002G430000 Sobic001G207400--Sobic002G270500 Sobic006G204900 Sobic006G204900 Sobic001G207400--Sobic006G204900 Sobic001G207400--Sobic005G157000 Sobic010G139600 Sobic010G139600 Sobic001G207400--Sobic010G139600 Sobic002G111000 Sobic002G111000 Sobic001G207400--Sobic002G111000 Sobic003G322700 Sobic003G322700 Sobic001G207400--Sobic003G322700 Sobic001G050200 Sobic001G050200 Sobic001G207400--Sobic001G050200 Sobic004G355000--Sobic001G207400 Sobic004G355000--Sobic002G430000 Sobic001G248300 Sobic001G248300 Sobic004G355000--Sobic001G248300 Sobic005G001000 Sobic005G001000 Sobic004G355000--Sobic005G001000 Sobic004G355000--Sobic004G329400 Sobic004G355000--Sobic005G157000 Sobic004G355000--Sobic003G322700 Sobic004G355000--Sobic004G113400 Sobic009G010600 Sobic009G010600 Sobic004G355000--Sobic009G010600 Sobic007G024700--Sobic002G270500 Sobic007G024700--Sobic009G094300 Sobic009G249200 Sobic009G249200 Sobic007G024700--Sobic009G249200 Sobic004G052900 Sobic004G052900 Sobic007G024700--Sobic004G052900 Sobic001G270400 Sobic001G270400 Sobic007G024700--Sobic001G270400 Sobic004G264400 Sobic004G264400 Sobic007G024700--Sobic004G264400 Sobic003G305200 Sobic003G305200 Sobic007G024700--Sobic003G305200 Sobic002G132000 Sobic002G132000 Sobic007G024700--Sobic002G132000 Sobic002G419800 Sobic002G419800 Sobic007G024700--Sobic002G419800 Sobic004G269200--Sobic009G027300 Sobic004G269200--Sobic001G050200 Sobic001G281100 Sobic001G281100 Sobic004G269200--Sobic001G281100 Sobic004G269200--Sobic004G329400 Sobic004G331100 Sobic004G331100 Sobic004G269200--Sobic004G331100 Sobic003G101400 Sobic003G101400 Sobic004G269200--Sobic003G101400 Sobic004G004300 Sobic004G004300 Sobic004G269200--Sobic004G004300 Sobic004G269200--Sobic005G157000 Sobic001G534800 Sobic001G534800 Sobic004G269200--Sobic001G534800 Sobic002G270500--Sobic007G024700 Sobic002G270500--Sobic001G207400 Sobic002G270500--Sobic004G355000 Sobic002G270500--Sobic005G157000 Sobic002G270500--Sobic002G430000 Sobic009G126900 Sobic009G126900 Sobic002G270500--Sobic009G126900 Sobic002G270500--Sobic009G094300 Sobic002G270500--Sobic004G113400 Sobic002G270500--Sobic004G269200 Sobic004G113400--Sobic009G010600 Sobic004G113400--Sobic003G408600 Sobic004G113400--Sobic004G329400 Sobic004G113400--Sobic001G058700 Sobic008G099800 Sobic008G099800 Sobic004G113400--Sobic008G099800 Sobic001G178700 Sobic001G178700 Sobic004G113400--Sobic001G178700 Sobic001G117200 Sobic001G117200 Sobic004G113400--Sobic001G117200 Sobic004G113400--Sobic001G534800 Sobic004G113400--Sobic002G430000 Sobic009G094300--Sobic007G024700 Sobic009G094300--Sobic004G113400 Sobic009G094300--Sobic002G270500 Sobic009G094300--Sobic004G329400 Sobic009G094300--Sobic005G157000 Sobic009G094300--Sobic004G052900 Sobic009G094300--Sobic001G270400 Sobic009G094300--Sobic001G248300 Sobic009G094300--Sobic001G207400 Sobic002G430000--Sobic001G207400 Sobic002G430000--Sobic001G117200 Sobic002G430000--Sobic004G355000 Sobic008G098900 Sobic008G098900 Sobic002G430000--Sobic008G098900 Sobic001G016700 Sobic001G016700 Sobic002G430000--Sobic001G016700 Sobic002G430000--Sobic004G113400 Sobic002G430000--Sobic010G139600 Sobic008G092600 Sobic008G092600 Sobic002G430000--Sobic008G092600 Sobic003G110000 Sobic003G110000 Sobic002G430000--Sobic003G110000
Octagon: transcription factors


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