Gene annotation
Transcriptome id Sobic.004G331100.1,Sobic.004G331100.3,Sobic.004G331100.4
Synonym Sb04g036000
Functional annotation WD domain and HEAT domain containing protein, putative, expressed
UniProt C5XUH3
Pfam PF02985 PF00400 PF00069
Panther DB PTHR17583
NCBI CDD -
KEGG Orthology K08333; PIK3R4, phosphoinositide-3-kinase, regulatory subunit 4
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G29380 : protein kinase family protein / WD-40 repeat family protein
RAP-DB (Rice) LOC_Os02g55340.1 : WD domain and HEAT domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a022478 , Zm00025a031114 , Zm00025a032927
Brachypodium KQK01155 , KQK01156 , KQK01157
Barley HORVU2Hr1G057610.42 , HORVU2Hr1G057610.43 , HORVU2Hr1G057610.40 , HORVU2Hr1G057610.41 , HORVU2Hr1G057610.46 , HORVU2Hr1G057610.47 , HORVU2Hr1G057610.44 , HORVU2Hr1G057610.45 , HORVU2Hr1G057610.48 , HORVU2Hr1G057610.49 , HORVU2Hr1G057610.9 , HORVU2Hr1G057610.8 , HORVU2Hr1G057610.5 , HORVU2Hr1G057610.4 , HORVU2Hr1G057610.7 , HORVU2Hr1G057610.6 , HORVU2Hr1G057610.1 , HORVU2Hr1G057610.3 , HORVU2Hr1G057610.2 , HORVU2Hr1G057610.37 , HORVU2Hr1G057610.36 , HORVU2Hr1G057610.35 , HORVU2Hr1G057610.34 , HORVU2Hr1G057610.33 , HORVU2Hr1G057610.32 , HORVU2Hr1G057610.31 , HORVU2Hr1G057610.30 , HORVU2Hr1G057610.39 , HORVU2Hr1G057610.38 , HORVU2Hr1G057610.60 , HORVU2Hr1G057610.61 , HORVU6Hr1G085720.8 , HORVU6Hr1G085720.9 , HORVU6Hr1G085720.2 , HORVU6Hr1G085720.3 , HORVU6Hr1G085720.1 , HORVU6Hr1G085720.6 , HORVU6Hr1G085720.7 , HORVU6Hr1G085720.4 , HORVU6Hr1G085720.5 , HORVU2Hr1G057610.24 , HORVU2Hr1G057610.25 , HORVU2Hr1G057610.26 , HORVU2Hr1G057610.27 , HORVU2Hr1G057610.20 , HORVU2Hr1G057610.21 , HORVU2Hr1G057610.22 , HORVU2Hr1G057610.23 , HORVU2Hr1G057610.28 , HORVU2Hr1G057610.29 , HORVU2Hr1G057610.59 , HORVU2Hr1G057610.58 , HORVU2Hr1G057610.54 , HORVU2Hr1G057610.57 , HORVU2Hr1G057610.56 , HORVU2Hr1G057610.51 , HORVU2Hr1G057610.50 , HORVU2Hr1G057610.53 , HORVU2Hr1G057610.52 , HORVU2Hr1G057610.19 , HORVU2Hr1G057610.18 , HORVU2Hr1G057610.11 , HORVU2Hr1G057610.10 , HORVU2Hr1G057610.13 , HORVU2Hr1G057610.12 , HORVU2Hr1G057610.15 , HORVU2Hr1G057610.14 , HORVU2Hr1G057610.17 , HORVU2Hr1G057610.16
Wheat TraesCS6B02G393000 , TraesCS6A02G360100 , TraesCS6A02G360100 , TraesCS6D02G343100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G075400 expressed protein -
2 Sobic.009G027300 MYB family transcription factor, putative, expressed K04650: NCOR1, nuclear receptor co-repressor 1
3 Sobic.002G419800 structural constituent of ribosome, putative, expressed -
4 Sobic.003G101400 transcriptional repressor, putative, expressed K11644: paired amphipathic helix protein Sin3a
5 Sobic.001G290100 expressed protein -
6 Sobic.001G050200 expressed protein -
7 Sobic.004G347400 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
8 Sobic.003G118200 phosphoadenosine phosphosulfate, putative, expressed -
9 Sobic.004G065000 expressed protein -
10 Sobic.003G422500 expressed protein -
11 Sobic.001G058700 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
12 Sobic.009G166300 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
13 Sobic.002G008900 sister chromatid cohesion 2, putative, expressed K06672: SCC2, cohesin loading factor subunit SCC2
14 Sobic.004G264400 TBC domain containing protein, expressed -
15 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
16 Sobic.009G113000 chaperone protein dnaJ 49, putative, expressed K09518: DnaJ homolog subfamily B member 12
17 Sobic.009G026500 ATSIZ1/SIZ1, putative, expressed -
18 Sobic.001G436900 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
19 Sobic.009G053900 HECT-domain domain containing protein, expressed K10589: ubiquitin-protein ligase E3 C
20 Sobic.001G109800 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C


Gene co-expression network
sample Sobic004G331100 Sobic004G331100 Sobic007G075400 Sobic007G075400 Sobic004G331100--Sobic007G075400 Sobic009G027300 Sobic009G027300 Sobic004G331100--Sobic009G027300 Sobic002G419800 Sobic002G419800 Sobic004G331100--Sobic002G419800 Sobic003G101400 Sobic003G101400 Sobic004G331100--Sobic003G101400 Sobic001G290100 Sobic001G290100 Sobic004G331100--Sobic001G290100 Sobic001G050200 Sobic001G050200 Sobic004G331100--Sobic001G050200 Sobic004G347400 Sobic004G347400 Sobic004G331100--Sobic004G347400 Sobic003G118200 Sobic003G118200 Sobic004G331100--Sobic003G118200 Sobic004G065000 Sobic004G065000 Sobic004G331100--Sobic004G065000 Sobic010G139600 Sobic010G139600 Sobic007G075400--Sobic010G139600 Sobic009G053900 Sobic009G053900 Sobic007G075400--Sobic009G053900 Sobic007G075400--Sobic004G331100 Sobic002G008900 Sobic002G008900 Sobic007G075400--Sobic002G008900 Sobic009G191000 Sobic009G191000 Sobic007G075400--Sobic009G191000 Sobic002G146300 Sobic002G146300 Sobic007G075400--Sobic002G146300 Sobic003G422500 Sobic003G422500 Sobic007G075400--Sobic003G422500 Sobic003G313500 Sobic003G313500 Sobic007G075400--Sobic003G313500 Sobic007G075400--Sobic004G065000 Sobic008G132600 Sobic008G132600 Sobic009G027300--Sobic008G132600 Sobic002G045600 Sobic002G045600 Sobic009G027300--Sobic002G045600 Sobic009G027300--Sobic004G331100 Sobic009G027300--Sobic003G422500 Sobic009G027300--Sobic002G008900 Sobic009G027300--Sobic003G101400 Sobic009G027300--Sobic001G050200 Sobic009G027300--Sobic009G191000 Sobic009G027300--Sobic007G075400 Sobic002G419800--Sobic004G331100 Sobic002G419800--Sobic001G050200 Sobic002G419800--Sobic009G027300 Sobic002G419800--Sobic007G075400 Sobic002G419800--Sobic001G290100 Sobic007G172400 Sobic007G172400 Sobic002G419800--Sobic007G172400 Sobic001G289600 Sobic001G289600 Sobic002G419800--Sobic001G289600 Sobic007G024700 Sobic007G024700 Sobic002G419800--Sobic007G024700 Sobic007G105100 Sobic007G105100 Sobic002G419800--Sobic007G105100 Sobic003G101400--Sobic008G132600 Sobic003G101400--Sobic003G422500 Sobic002G411600 Sobic002G411600 Sobic003G101400--Sobic002G411600 Sobic007G062800 Sobic007G062800 Sobic003G101400--Sobic007G062800 Sobic001G540400 Sobic001G540400 Sobic003G101400--Sobic001G540400 Sobic003G101400--Sobic009G191000 Sobic003G101400--Sobic002G008900 Sobic003G101400--Sobic001G290100 Sobic003G229500 Sobic003G229500 Sobic003G101400--Sobic003G229500 Sobic001G290100--Sobic003G101400 Sobic009G026500 Sobic009G026500 Sobic001G290100--Sobic009G026500 Sobic001G290100--Sobic004G331100 Sobic001G290100--Sobic002G419800 Sobic010G201500 Sobic010G201500 Sobic001G290100--Sobic010G201500 Sobic009G166300 Sobic009G166300 Sobic001G290100--Sobic009G166300 Sobic002G315200 Sobic002G315200 Sobic001G290100--Sobic002G315200 Sobic002G071500 Sobic002G071500 Sobic001G290100--Sobic002G071500 Sobic003G372700 Sobic003G372700 Sobic001G290100--Sobic003G372700 Sobic001G050200--Sobic002G419800 Sobic001G050200--Sobic003G422500 Sobic001G050200--Sobic009G027300 Sobic003G247300 Sobic003G247300 Sobic001G050200--Sobic003G247300 Sobic001G050200--Sobic009G191000 Sobic001G050200--Sobic007G075400 Sobic004G269200 Sobic004G269200 Sobic001G050200--Sobic004G269200 Sobic001G050200--Sobic004G331100 Sobic001G050200--Sobic003G101400 Sobic004G347400--Sobic003G422500 Sobic001G058700 Sobic001G058700 Sobic004G347400--Sobic001G058700 Sobic004G347400--Sobic003G118200 Sobic001G114000 Sobic001G114000 Sobic004G347400--Sobic001G114000 Sobic004G347400--Sobic007G172400 Sobic004G347400--Sobic004G331100 Sobic004G347400--Sobic009G053900 Sobic001G065000 Sobic001G065000 Sobic004G347400--Sobic001G065000 Sobic001G474600 Sobic001G474600 Sobic004G347400--Sobic001G474600 Sobic003G118200--Sobic009G053900 Sobic003G118200--Sobic009G191000 Sobic009G113000 Sobic009G113000 Sobic003G118200--Sobic009G113000 Sobic003G118200--Sobic003G422500 Sobic003G118200--Sobic002G008900 Sobic003G118200--Sobic004G347400 Sobic003G118200--Sobic007G075400 Sobic001G451400 Sobic001G451400 Sobic003G118200--Sobic001G451400 Sobic003G118200--Sobic003G313500 Sobic004G065000--Sobic007G075400 Sobic004G065000--Sobic004G331100 Sobic009G133500 Sobic009G133500 Sobic004G065000--Sobic009G133500 Sobic007G163100 Sobic007G163100 Sobic004G065000--Sobic007G163100 Sobic007G133700 Sobic007G133700 Sobic004G065000--Sobic007G133700 Sobic004G065000--Sobic010G139600 Sobic001G313700 Sobic001G313700 Sobic004G065000--Sobic001G313700 Sobic001G273700 Sobic001G273700 Sobic004G065000--Sobic001G273700 Sobic001G085300 Sobic001G085300 Sobic004G065000--Sobic001G085300
Octagon: transcription factors


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