Gene annotation
Transcriptome id Sobic.009G027300.8,Sobic.009G027300.5,Sobic.009G027300.7,Sobic.009G027300.6
Synonym Sb09g002290
Functional annotation MYB family transcription factor, putative, expressed
UniProt A0A1Z5R0K3 , A0A1Z5R1M0 , A0A1Z5R0K6
Pfam PF00249
Panther DB PTHR13992
NCBI CDD -
KEGG Orthology K04650; NCOR1, nuclear receptor co-repressor 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G52250 : Duplicated homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os05g03550.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a040726 , Zm00025a019497 , Zm00025a038181 , Zm00025a055207
Brachypodium KQK07835 , KQK07873
Barley HORVU1Hr1G014120.15 , HORVU1Hr1G014120.14 , HORVU1Hr1G014120.17 , HORVU1Hr1G014120.16 , HORVU1Hr1G014120.11 , HORVU1Hr1G014120.10 , HORVU1Hr1G014120.13 , HORVU1Hr1G014120.12 , HORVU7Hr1G061390.4 , HORVU7Hr1G061390.1 , HORVU7Hr1G061390.2 , HORVU7Hr1G061390.3 , HORVU1Hr1G014120.3 , HORVU1Hr1G014120.5 , HORVU1Hr1G014120.4 , HORVU1Hr1G014120.7 , HORVU1Hr1G014120.6 , HORVU1Hr1G014120.9 , HORVU1Hr1G014120.8
Wheat TraesCS1B02G086600 , TraesCS1B02G086600 , TraesCS1D02G069700 , TraesCS1D02G069700 , TraesCS1D02G069700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G132600 expressed protein -
2 Sobic.002G045600 transcriptional corepressor SEUSS, putative, expressed -
3 Sobic.004G331100 WD domain and HEAT domain containing protein, putative, expressed K08333: PIK3R4, phosphoinositide-3-kinase, regulatory subunit 4
4 Sobic.003G422500 expressed protein -
5 Sobic.002G008900 sister chromatid cohesion 2, putative, expressed K06672: SCC2, cohesin loading factor subunit SCC2
6 Sobic.003G101400 transcriptional repressor, putative, expressed K11644: paired amphipathic helix protein Sin3a
7 Sobic.001G050200 expressed protein -
8 Sobic.009G191000 MATH domain containing protein, expressed -
9 Sobic.007G075400 expressed protein -
10 Sobic.002G419800 structural constituent of ribosome, putative, expressed -
11 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
12 Sobic.003G229500 ZOS12-01 - C2H2 zinc finger protein, expressed -
13 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
14 Sobic.001G540400 expressed protein -
15 Sobic.004G329400 formin, putative, expressed -
16 Sobic.001G289600 BAH domain containing protein, putative, expressed -
17 Sobic.001G290100 expressed protein -
18 Sobic.007G062800 SET domain containing protein, expressed -
19 Sobic.002G411600 CW-type Zinc Finger, putative, expressed -
20 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant


Gene co-expression network
sample Sobic009G027300 Sobic009G027300 Sobic008G132600 Sobic008G132600 Sobic009G027300--Sobic008G132600 Sobic002G045600 Sobic002G045600 Sobic009G027300--Sobic002G045600 Sobic004G331100 Sobic004G331100 Sobic009G027300--Sobic004G331100 Sobic003G422500 Sobic003G422500 Sobic009G027300--Sobic003G422500 Sobic002G008900 Sobic002G008900 Sobic009G027300--Sobic002G008900 Sobic003G101400 Sobic003G101400 Sobic009G027300--Sobic003G101400 Sobic001G050200 Sobic001G050200 Sobic009G027300--Sobic001G050200 Sobic009G191000 Sobic009G191000 Sobic009G027300--Sobic009G191000 Sobic007G075400 Sobic007G075400 Sobic009G027300--Sobic007G075400 Sobic008G132600--Sobic003G101400 Sobic008G132600--Sobic003G422500 Sobic002G411600 Sobic002G411600 Sobic008G132600--Sobic002G411600 Sobic003G229500 Sobic003G229500 Sobic008G132600--Sobic003G229500 Sobic008G132600--Sobic009G191000 Sobic008G132600--Sobic009G027300 Sobic007G062800 Sobic007G062800 Sobic008G132600--Sobic007G062800 Sobic008G132600--Sobic002G008900 Sobic010G247800 Sobic010G247800 Sobic008G132600--Sobic010G247800 Sobic003G408600 Sobic003G408600 Sobic002G045600--Sobic003G408600 Sobic002G045600--Sobic009G027300 Sobic009G044800 Sobic009G044800 Sobic002G045600--Sobic009G044800 Sobic007G163100 Sobic007G163100 Sobic002G045600--Sobic007G163100 Sobic003G360400 Sobic003G360400 Sobic002G045600--Sobic003G360400 Sobic001G313700 Sobic001G313700 Sobic002G045600--Sobic001G313700 Sobic004G200200 Sobic004G200200 Sobic002G045600--Sobic004G200200 Sobic001G207000 Sobic001G207000 Sobic002G045600--Sobic001G207000 Sobic002G045600--Sobic003G422500 Sobic004G331100--Sobic007G075400 Sobic004G331100--Sobic009G027300 Sobic002G419800 Sobic002G419800 Sobic004G331100--Sobic002G419800 Sobic004G331100--Sobic003G101400 Sobic001G290100 Sobic001G290100 Sobic004G331100--Sobic001G290100 Sobic004G331100--Sobic001G050200 Sobic004G347400 Sobic004G347400 Sobic004G331100--Sobic004G347400 Sobic003G118200 Sobic003G118200 Sobic004G331100--Sobic003G118200 Sobic004G065000 Sobic004G065000 Sobic004G331100--Sobic004G065000 Sobic003G422500--Sobic002G411600 Sobic003G422500--Sobic009G191000 Sobic001G289600 Sobic001G289600 Sobic003G422500--Sobic001G289600 Sobic009G165700 Sobic009G165700 Sobic003G422500--Sobic009G165700 Sobic003G422500--Sobic002G008900 Sobic004G034900 Sobic004G034900 Sobic003G422500--Sobic004G034900 Sobic001G289800 Sobic001G289800 Sobic003G422500--Sobic001G289800 Sobic001G540400 Sobic001G540400 Sobic003G422500--Sobic001G540400 Sobic003G422500--Sobic008G132600 Sobic002G008900--Sobic009G191000 Sobic002G008900--Sobic002G411600 Sobic002G008900--Sobic007G062800 Sobic002G008900--Sobic003G422500 Sobic005G001000 Sobic005G001000 Sobic002G008900--Sobic005G001000 Sobic010G010700 Sobic010G010700 Sobic002G008900--Sobic010G010700 Sobic002G008900--Sobic004G034900 Sobic010G206900 Sobic010G206900 Sobic002G008900--Sobic010G206900 Sobic009G053900 Sobic009G053900 Sobic002G008900--Sobic009G053900 Sobic003G101400--Sobic008G132600 Sobic003G101400--Sobic003G422500 Sobic003G101400--Sobic002G411600 Sobic003G101400--Sobic007G062800 Sobic003G101400--Sobic001G540400 Sobic003G101400--Sobic009G191000 Sobic003G101400--Sobic002G008900 Sobic003G101400--Sobic001G290100 Sobic003G101400--Sobic003G229500 Sobic001G050200--Sobic002G419800 Sobic001G050200--Sobic003G422500 Sobic001G050200--Sobic009G027300 Sobic003G247300 Sobic003G247300 Sobic001G050200--Sobic003G247300 Sobic001G050200--Sobic009G191000 Sobic001G050200--Sobic007G075400 Sobic004G269200 Sobic004G269200 Sobic001G050200--Sobic004G269200 Sobic001G050200--Sobic004G331100 Sobic001G050200--Sobic003G101400 Sobic009G191000--Sobic002G008900 Sobic009G191000--Sobic002G411600 Sobic009G191000--Sobic003G422500 Sobic009G191000--Sobic009G053900 Sobic009G191000--Sobic001G289600 Sobic003G313500 Sobic003G313500 Sobic009G191000--Sobic003G313500 Sobic009G191000--Sobic010G247800 Sobic009G191000--Sobic004G034900 Sobic001G365900 Sobic001G365900 Sobic009G191000--Sobic001G365900 Sobic010G139600 Sobic010G139600 Sobic007G075400--Sobic010G139600 Sobic007G075400--Sobic009G053900 Sobic007G075400--Sobic004G331100 Sobic007G075400--Sobic002G008900 Sobic007G075400--Sobic009G191000 Sobic002G146300 Sobic002G146300 Sobic007G075400--Sobic002G146300 Sobic007G075400--Sobic003G422500 Sobic007G075400--Sobic003G313500 Sobic007G075400--Sobic004G065000
Octagon: transcription factors


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