Gene annotation
Transcriptome id Sobic.001G290100.2,Sobic.001G290100.1
Synonym Sb01g028420
Functional annotation expressed protein
UniProt A0A1B6QMS0 , A0A1Z5S861
Pfam -
Panther DB PTHR33304 PTHR33304:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G02890 : RING/FYVE/PHD zinc finger superfamily protein
RAP-DB (Rice) LOC_Os10g42196.1 : expressed protein
MaizeGDB (Corn) Zm00025a003485 , Zm00025a034062 , Zm00025a051841
Brachypodium KQJ97895
Barley -
Wheat TraesCS1A02G190700 , TraesCS1B02G205900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G101400 transcriptional repressor, putative, expressed K11644: paired amphipathic helix protein Sin3a
2 Sobic.009G026500 ATSIZ1/SIZ1, putative, expressed -
3 Sobic.004G331100 WD domain and HEAT domain containing protein, putative, expressed K08333: PIK3R4, phosphoinositide-3-kinase, regulatory subunit 4
4 Sobic.002G419800 structural constituent of ribosome, putative, expressed -
5 Sobic.010G201500 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
6 Sobic.009G166300 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
7 Sobic.002G315200 DNA-binding bromodomain-containing protein, putative, expressed -
8 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
9 Sobic.003G372700 expressed protein -
10 Sobic.002G008900 sister chromatid cohesion 2, putative, expressed K06672: SCC2, cohesin loading factor subunit SCC2
11 Sobic.009G027300 MYB family transcription factor, putative, expressed K04650: NCOR1, nuclear receptor co-repressor 1
12 Sobic.009G191000 MATH domain containing protein, expressed -
13 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
14 Sobic.007G062800 SET domain containing protein, expressed -
15 Sobic.001G540400 expressed protein -
16 Sobic.001G109800 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
17 Sobic.010G069100 expressed protein -
18 Sobic.010G153700 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
19 Sobic.001G050200 expressed protein -
20 Sobic.007G105100 STE_MEK_ste7_MAP2K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1


Gene co-expression network
sample Sobic001G290100 Sobic001G290100 Sobic003G101400 Sobic003G101400 Sobic001G290100--Sobic003G101400 Sobic009G026500 Sobic009G026500 Sobic001G290100--Sobic009G026500 Sobic004G331100 Sobic004G331100 Sobic001G290100--Sobic004G331100 Sobic002G419800 Sobic002G419800 Sobic001G290100--Sobic002G419800 Sobic010G201500 Sobic010G201500 Sobic001G290100--Sobic010G201500 Sobic009G166300 Sobic009G166300 Sobic001G290100--Sobic009G166300 Sobic002G315200 Sobic002G315200 Sobic001G290100--Sobic002G315200 Sobic002G071500 Sobic002G071500 Sobic001G290100--Sobic002G071500 Sobic003G372700 Sobic003G372700 Sobic001G290100--Sobic003G372700 Sobic008G132600 Sobic008G132600 Sobic003G101400--Sobic008G132600 Sobic003G422500 Sobic003G422500 Sobic003G101400--Sobic003G422500 Sobic002G411600 Sobic002G411600 Sobic003G101400--Sobic002G411600 Sobic007G062800 Sobic007G062800 Sobic003G101400--Sobic007G062800 Sobic001G540400 Sobic001G540400 Sobic003G101400--Sobic001G540400 Sobic009G191000 Sobic009G191000 Sobic003G101400--Sobic009G191000 Sobic002G008900 Sobic002G008900 Sobic003G101400--Sobic002G008900 Sobic003G101400--Sobic001G290100 Sobic003G229500 Sobic003G229500 Sobic003G101400--Sobic003G229500 Sobic001G365900 Sobic001G365900 Sobic009G026500--Sobic001G365900 Sobic007G126600 Sobic007G126600 Sobic009G026500--Sobic007G126600 Sobic008G192600 Sobic008G192600 Sobic009G026500--Sobic008G192600 Sobic001G214300 Sobic001G214300 Sobic009G026500--Sobic001G214300 Sobic010G153700 Sobic010G153700 Sobic009G026500--Sobic010G153700 Sobic009G026500--Sobic003G372700 Sobic009G026500--Sobic001G290100 Sobic002G006900 Sobic002G006900 Sobic009G026500--Sobic002G006900 Sobic009G026500--Sobic002G008900 Sobic007G075400 Sobic007G075400 Sobic004G331100--Sobic007G075400 Sobic009G027300 Sobic009G027300 Sobic004G331100--Sobic009G027300 Sobic004G331100--Sobic002G419800 Sobic004G331100--Sobic003G101400 Sobic004G331100--Sobic001G290100 Sobic001G050200 Sobic001G050200 Sobic004G331100--Sobic001G050200 Sobic004G347400 Sobic004G347400 Sobic004G331100--Sobic004G347400 Sobic003G118200 Sobic003G118200 Sobic004G331100--Sobic003G118200 Sobic004G065000 Sobic004G065000 Sobic004G331100--Sobic004G065000 Sobic002G419800--Sobic004G331100 Sobic002G419800--Sobic001G050200 Sobic002G419800--Sobic009G027300 Sobic002G419800--Sobic007G075400 Sobic002G419800--Sobic001G290100 Sobic007G172400 Sobic007G172400 Sobic002G419800--Sobic007G172400 Sobic001G289600 Sobic001G289600 Sobic002G419800--Sobic001G289600 Sobic007G024700 Sobic007G024700 Sobic002G419800--Sobic007G024700 Sobic007G105100 Sobic007G105100 Sobic002G419800--Sobic007G105100 Sobic010G201500--Sobic002G071500 Sobic007G065400 Sobic007G065400 Sobic010G201500--Sobic007G065400 Sobic004G271000 Sobic004G271000 Sobic010G201500--Sobic004G271000 Sobic010G201500--Sobic003G372700 Sobic010G201500--Sobic002G006900 Sobic002G191800 Sobic002G191800 Sobic010G201500--Sobic002G191800 Sobic010G065300 Sobic010G065300 Sobic010G201500--Sobic010G065300 Sobic010G069100 Sobic010G069100 Sobic010G201500--Sobic010G069100 Sobic001G155000 Sobic001G155000 Sobic010G201500--Sobic001G155000 Sobic007G217000 Sobic007G217000 Sobic009G166300--Sobic007G217000 Sobic003G408500 Sobic003G408500 Sobic009G166300--Sobic003G408500 Sobic001G474600 Sobic001G474600 Sobic009G166300--Sobic001G474600 Sobic007G011300 Sobic007G011300 Sobic009G166300--Sobic007G011300 Sobic001G114000 Sobic001G114000 Sobic009G166300--Sobic001G114000 Sobic008G047800 Sobic008G047800 Sobic009G166300--Sobic008G047800 Sobic005G045300 Sobic005G045300 Sobic009G166300--Sobic005G045300 Sobic005G118600 Sobic005G118600 Sobic009G166300--Sobic005G118600 Sobic001G109800 Sobic001G109800 Sobic009G166300--Sobic001G109800 Sobic002G315200--Sobic010G153700 Sobic002G315200--Sobic002G006900 Sobic001G071400 Sobic001G071400 Sobic002G315200--Sobic001G071400 Sobic002G315200--Sobic008G047800 Sobic001G220300 Sobic001G220300 Sobic002G315200--Sobic001G220300 Sobic001G512700 Sobic001G512700 Sobic002G315200--Sobic001G512700 Sobic002G315200--Sobic009G191000 Sobic002G315200--Sobic001G290100 Sobic001G497300 Sobic001G497300 Sobic002G315200--Sobic001G497300 Sobic005G112300 Sobic005G112300 Sobic002G071500--Sobic005G112300 Sobic003G408600 Sobic003G408600 Sobic002G071500--Sobic003G408600 Sobic008G009700 Sobic008G009700 Sobic002G071500--Sobic008G009700 Sobic010G116600 Sobic010G116600 Sobic002G071500--Sobic010G116600 Sobic001G026200 Sobic001G026200 Sobic002G071500--Sobic001G026200 Sobic002G153700 Sobic002G153700 Sobic002G071500--Sobic002G153700 Sobic002G071500--Sobic010G069100 Sobic003G119000 Sobic003G119000 Sobic002G071500--Sobic003G119000 Sobic002G071500--Sobic010G201500 Sobic003G372700--Sobic002G006900 Sobic003G372700--Sobic003G119000 Sobic003G372700--Sobic007G065400 Sobic003G372700--Sobic005G112300 Sobic003G372700--Sobic002G191800 Sobic009G040600 Sobic009G040600 Sobic003G372700--Sobic009G040600 Sobic002G309600 Sobic002G309600 Sobic003G372700--Sobic002G309600 Sobic003G280800 Sobic003G280800 Sobic003G372700--Sobic003G280800 Sobic003G372700--Sobic001G474600
Octagon: transcription factors


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