Gene annotation
Transcriptome id Sobic.002G315200.1
Synonym Sb02g034450
Functional annotation DNA-binding bromodomain-containing protein, putative, expressed
UniProt A0A1B6QEG4
Pfam PF00439
Panther DB PTHR22881 PTHR22881:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G55040 : DNA-binding bromodomain-containing protein
RAP-DB (Rice) LOC_Os03g03870.1 : DNA-binding bromodomain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a048201 , Zm00025a014764
Brachypodium KQK16043
Barley HORVU2Hr1G046980.3 , HORVU2Hr1G046980.2 , HORVU2Hr1G046980.1 , HORVU2Hr1G046980.6 , HORVU2Hr1G046980.5 , HORVU2Hr1G046980.4
Wheat TraesCS2B02G274400 , TraesCS2D02G230500 , TraesCS2A02G224200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G153700 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
2 Sobic.002G006900 tetratricopeptide repeat domain containing protein, expressed -
3 Sobic.001G071400 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
4 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
5 Sobic.001G220300 serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
6 Sobic.001G512700 myb/SANT domain protein, putative, expressed -
7 Sobic.009G191000 MATH domain containing protein, expressed -
8 Sobic.001G290100 expressed protein -
9 Sobic.001G497300 protein kinase domain containing protein, expressed -
10 Sobic.007G217000 tetratricopeptide repeat domain containing protein, expressed K13342: PEX5, peroxin-5
11 Sobic.003G372700 expressed protein -
12 Sobic.003G056100 transcription initiation factor, putative, expressed K03129: transcription initiation factor TFIID subunit 4
13 Sobic.004G341900 lecithine cholesterol acyltransferase, putative, expressed -
14 Sobic.009G027300 MYB family transcription factor, putative, expressed K04650: NCOR1, nuclear receptor co-repressor 1
15 Sobic.006G237400 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
16 Sobic.001G125200 HEAT repeat family protein, putative, expressed -
17 Sobic.002G340100 GTPase-activating protein, putative, expressed K12486: stromal membrane-associated protein
18 Sobic.001G109800 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
19 Sobic.001G409600 KH domain containing protein, putative, expressed K13095: splicing factor 1
20 Sobic.009G166300 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12


Gene co-expression network
sample Sobic002G315200 Sobic002G315200 Sobic010G153700 Sobic010G153700 Sobic002G315200--Sobic010G153700 Sobic002G006900 Sobic002G006900 Sobic002G315200--Sobic002G006900 Sobic001G071400 Sobic001G071400 Sobic002G315200--Sobic001G071400 Sobic008G047800 Sobic008G047800 Sobic002G315200--Sobic008G047800 Sobic001G220300 Sobic001G220300 Sobic002G315200--Sobic001G220300 Sobic001G512700 Sobic001G512700 Sobic002G315200--Sobic001G512700 Sobic009G191000 Sobic009G191000 Sobic002G315200--Sobic009G191000 Sobic001G290100 Sobic001G290100 Sobic002G315200--Sobic001G290100 Sobic001G497300 Sobic001G497300 Sobic002G315200--Sobic001G497300 Sobic010G153700--Sobic002G315200 Sobic009G026500 Sobic009G026500 Sobic010G153700--Sobic009G026500 Sobic010G153700--Sobic009G191000 Sobic010G153700--Sobic001G512700 Sobic002G008900 Sobic002G008900 Sobic010G153700--Sobic002G008900 Sobic002G134200 Sobic002G134200 Sobic010G153700--Sobic002G134200 Sobic010G153700--Sobic002G006900 Sobic010G153700--Sobic001G071400 Sobic001G214300 Sobic001G214300 Sobic010G153700--Sobic001G214300 Sobic002G006900--Sobic008G047800 Sobic007G065400 Sobic007G065400 Sobic002G006900--Sobic007G065400 Sobic003G200200 Sobic003G200200 Sobic002G006900--Sobic003G200200 Sobic003G372700 Sobic003G372700 Sobic002G006900--Sobic003G372700 Sobic009G040600 Sobic009G040600 Sobic002G006900--Sobic009G040600 Sobic001G155000 Sobic001G155000 Sobic002G006900--Sobic001G155000 Sobic002G309600 Sobic002G309600 Sobic002G006900--Sobic002G309600 Sobic002G006900--Sobic001G214300 Sobic002G006900--Sobic001G512700 Sobic001G071400--Sobic002G134200 Sobic001G071400--Sobic002G309600 Sobic003G280800 Sobic003G280800 Sobic001G071400--Sobic003G280800 Sobic001G071400--Sobic008G047800 Sobic001G071400--Sobic009G191000 Sobic001G219600 Sobic001G219600 Sobic001G071400--Sobic001G219600 Sobic005G112300 Sobic005G112300 Sobic001G071400--Sobic005G112300 Sobic001G071400--Sobic002G315200 Sobic001G071400--Sobic002G008900 Sobic008G047800--Sobic002G006900 Sobic004G084300 Sobic004G084300 Sobic008G047800--Sobic004G084300 Sobic008G047800--Sobic001G512700 Sobic008G047800--Sobic001G155000 Sobic008G047800--Sobic009G040600 Sobic007G011300 Sobic007G011300 Sobic008G047800--Sobic007G011300 Sobic007G217000 Sobic007G217000 Sobic008G047800--Sobic007G217000 Sobic004G274200 Sobic004G274200 Sobic008G047800--Sobic004G274200 Sobic008G047800--Sobic002G309600 Sobic004G146500 Sobic004G146500 Sobic001G220300--Sobic004G146500 Sobic001G220300--Sobic008G047800 Sobic001G220300--Sobic002G315200 Sobic010G101800 Sobic010G101800 Sobic001G220300--Sobic010G101800 Sobic001G109800 Sobic001G109800 Sobic001G220300--Sobic001G109800 Sobic001G220300--Sobic009G191000 Sobic004G065100 Sobic004G065100 Sobic001G220300--Sobic004G065100 Sobic001G220300--Sobic004G274200 Sobic002G297200 Sobic002G297200 Sobic001G220300--Sobic002G297200 Sobic001G512700--Sobic008G047800 Sobic001G512700--Sobic002G006900 Sobic003G248200 Sobic003G248200 Sobic001G512700--Sobic003G248200 Sobic001G512700--Sobic001G497300 Sobic007G118600 Sobic007G118600 Sobic001G512700--Sobic007G118600 Sobic004G021100 Sobic004G021100 Sobic001G512700--Sobic004G021100 Sobic005G045300 Sobic005G045300 Sobic001G512700--Sobic005G045300 Sobic001G512700--Sobic002G297200 Sobic008G067600 Sobic008G067600 Sobic001G512700--Sobic008G067600 Sobic009G191000--Sobic002G008900 Sobic002G411600 Sobic002G411600 Sobic009G191000--Sobic002G411600 Sobic003G422500 Sobic003G422500 Sobic009G191000--Sobic003G422500 Sobic009G053900 Sobic009G053900 Sobic009G191000--Sobic009G053900 Sobic001G289600 Sobic001G289600 Sobic009G191000--Sobic001G289600 Sobic003G313500 Sobic003G313500 Sobic009G191000--Sobic003G313500 Sobic010G247800 Sobic010G247800 Sobic009G191000--Sobic010G247800 Sobic004G034900 Sobic004G034900 Sobic009G191000--Sobic004G034900 Sobic001G365900 Sobic001G365900 Sobic009G191000--Sobic001G365900 Sobic003G101400 Sobic003G101400 Sobic001G290100--Sobic003G101400 Sobic001G290100--Sobic009G026500 Sobic004G331100 Sobic004G331100 Sobic001G290100--Sobic004G331100 Sobic002G419800 Sobic002G419800 Sobic001G290100--Sobic002G419800 Sobic010G201500 Sobic010G201500 Sobic001G290100--Sobic010G201500 Sobic009G166300 Sobic009G166300 Sobic001G290100--Sobic009G166300 Sobic001G290100--Sobic002G315200 Sobic002G071500 Sobic002G071500 Sobic001G290100--Sobic002G071500 Sobic001G290100--Sobic003G372700 Sobic007G104800 Sobic007G104800 Sobic001G497300--Sobic007G104800 Sobic001G497300--Sobic001G512700 Sobic001G497300--Sobic002G006900 Sobic006G237400 Sobic006G237400 Sobic001G497300--Sobic006G237400 Sobic004G205600 Sobic004G205600 Sobic001G497300--Sobic004G205600 Sobic001G413500 Sobic001G413500 Sobic001G497300--Sobic001G413500 Sobic001G497300--Sobic008G047800 Sobic005G023900 Sobic005G023900 Sobic001G497300--Sobic005G023900 Sobic002G157000 Sobic002G157000 Sobic001G497300--Sobic002G157000
Octagon: transcription factors


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