Gene annotation
Transcriptome id Sobic.002G340100.1
Synonym NEV, Sb02g036460, AGD5
Functional annotation GTPase-activating protein, putative, expressed
UniProt C5XBL1
Pfam PF01412
Panther DB PTHR23180 PTHR23180:SF160
NCBI CDD KOG0703; Predicted GTPase-activating protein
KEGG Orthology K12486; stromal membrane-associated protein
Gene Ontology GO:0005096; GTPase activator activity


Orthologs (automatic annotation)
TAIR AT5G54310 : ARF-GAP domain 5
RAP-DB (Rice) LOC_Os07g37650.1 : GTPase-activating protein, putative, expressed
MaizeGDB (Corn) Zm00025a048401 , Zm00025a043073 , Zm00025a033471 , Zm00025a014916
Brachypodium KQK15746 , KQK15745
Barley -
Wheat TraesCS2D02G212100 , TraesCS2D02G212100 , TraesCS2B02G230900 , TraesCS2A02G203600 , TraesCS2A02G203600
Populus -


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cDNA sequences
Sobic.002G340100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G292200 dynamin family protein, putative, expressed -
2 Sobic.001G071400 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
3 Sobic.006G245400 -(PubMedID : 34525227)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
4 Sobic.002G315200 DNA-binding bromodomain-containing protein, putative, expressed -
5 Sobic.009G135800 CUE domain containing protein, expressed -
6 Sobic.001G114000 expressed protein -
7 Sobic.007G217000 tetratricopeptide repeat domain containing protein, expressed K13342: PEX5, peroxin-5
8 Sobic.004G052900 biotin--protein ligase, putative, expressed K01942: biotin---protein ligase
9 Sobic.001G474600 calmodulin-binding transcription activator, putative, expressed -
10 Sobic.006G237400 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
11 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
12 Sobic.008G024600 expressed protein -
13 Sobic.003G280800 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
14 Sobic.002G134200 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
15 Sobic.003G372700 expressed protein -
16 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
17 Sobic.009G191000 MATH domain containing protein, expressed -
18 Sobic.001G512700 myb/SANT domain protein, putative, expressed -
19 Sobic.007G096000 expressed protein -
20 Sobic.002G427050 - -


Gene co-expression network
sample Sobic002G340100 Sobic002G340100 Sobic001G292200 Sobic001G292200 Sobic002G340100--Sobic001G292200 Sobic001G071400 Sobic001G071400 Sobic002G340100--Sobic001G071400 Sobic006G245400 Sobic006G245400 Sobic002G340100--Sobic006G245400 Sobic002G315200 Sobic002G315200 Sobic002G340100--Sobic002G315200 Sobic009G135800 Sobic009G135800 Sobic002G340100--Sobic009G135800 Sobic001G114000 Sobic001G114000 Sobic002G340100--Sobic001G114000 Sobic007G217000 Sobic007G217000 Sobic002G340100--Sobic007G217000 Sobic004G052900 Sobic004G052900 Sobic002G340100--Sobic004G052900 Sobic001G474600 Sobic001G474600 Sobic002G340100--Sobic001G474600 Sobic001G292200--Sobic002G340100 Sobic002G134200 Sobic002G134200 Sobic001G292200--Sobic002G134200 Sobic003G280800 Sobic003G280800 Sobic001G292200--Sobic003G280800 Sobic002G053000 Sobic002G053000 Sobic001G292200--Sobic002G053000 Sobic005G032800 Sobic005G032800 Sobic001G292200--Sobic005G032800 Sobic008G024600 Sobic008G024600 Sobic001G292200--Sobic008G024600 Sobic003G001100 Sobic003G001100 Sobic001G292200--Sobic003G001100 Sobic001G178700 Sobic001G178700 Sobic001G292200--Sobic001G178700 Sobic001G292200--Sobic001G071400 Sobic001G071400--Sobic002G134200 Sobic002G309600 Sobic002G309600 Sobic001G071400--Sobic002G309600 Sobic001G071400--Sobic003G280800 Sobic008G047800 Sobic008G047800 Sobic001G071400--Sobic008G047800 Sobic009G191000 Sobic009G191000 Sobic001G071400--Sobic009G191000 Sobic001G219600 Sobic001G219600 Sobic001G071400--Sobic001G219600 Sobic005G112300 Sobic005G112300 Sobic001G071400--Sobic005G112300 Sobic001G071400--Sobic002G315200 Sobic002G008900 Sobic002G008900 Sobic001G071400--Sobic002G008900 Sobic006G245400--Sobic002G340100 Sobic007G172400 Sobic007G172400 Sobic006G245400--Sobic007G172400 Sobic006G245400--Sobic004G052900 Sobic004G113400 Sobic004G113400 Sobic006G245400--Sobic004G113400 Sobic006G245400--Sobic001G114000 Sobic006G237400 Sobic006G237400 Sobic006G245400--Sobic006G237400 Sobic006G245400--Sobic007G217000 Sobic001G065000 Sobic001G065000 Sobic006G245400--Sobic001G065000 Sobic006G245400--Sobic001G474600 Sobic010G153700 Sobic010G153700 Sobic002G315200--Sobic010G153700 Sobic002G006900 Sobic002G006900 Sobic002G315200--Sobic002G006900 Sobic002G315200--Sobic001G071400 Sobic002G315200--Sobic008G047800 Sobic001G220300 Sobic001G220300 Sobic002G315200--Sobic001G220300 Sobic001G512700 Sobic001G512700 Sobic002G315200--Sobic001G512700 Sobic002G315200--Sobic009G191000 Sobic001G290100 Sobic001G290100 Sobic002G315200--Sobic001G290100 Sobic001G497300 Sobic001G497300 Sobic002G315200--Sobic001G497300 Sobic004G031700 Sobic004G031700 Sobic009G135800--Sobic004G031700 Sobic009G135800--Sobic002G340100 Sobic009G135800--Sobic008G024600 Sobic006G128900 Sobic006G128900 Sobic009G135800--Sobic006G128900 Sobic009G135800--Sobic002G053000 Sobic003G445400 Sobic003G445400 Sobic009G135800--Sobic003G445400 Sobic002G158700 Sobic002G158700 Sobic009G135800--Sobic002G158700 Sobic006G173100 Sobic006G173100 Sobic009G135800--Sobic006G173100 Sobic009G000500 Sobic009G000500 Sobic009G135800--Sobic009G000500 Sobic001G114000--Sobic007G217000 Sobic002G112700 Sobic002G112700 Sobic001G114000--Sobic002G112700 Sobic001G114000--Sobic001G065000 Sobic004G067700 Sobic004G067700 Sobic001G114000--Sobic004G067700 Sobic009G166300 Sobic009G166300 Sobic001G114000--Sobic009G166300 Sobic001G114000--Sobic008G047800 Sobic004G072100 Sobic004G072100 Sobic001G114000--Sobic004G072100 Sobic005G118600 Sobic005G118600 Sobic001G114000--Sobic005G118600 Sobic009G126400 Sobic009G126400 Sobic001G114000--Sobic009G126400 Sobic007G217000--Sobic001G114000 Sobic007G217000--Sobic008G047800 Sobic007G217000--Sobic009G166300 Sobic001G155000 Sobic001G155000 Sobic007G217000--Sobic001G155000 Sobic007G217000--Sobic001G474600 Sobic007G011300 Sobic007G011300 Sobic007G217000--Sobic007G011300 Sobic007G118600 Sobic007G118600 Sobic007G217000--Sobic007G118600 Sobic002G310200 Sobic002G310200 Sobic007G217000--Sobic002G310200 Sobic007G217000--Sobic004G067700 Sobic003G109100 Sobic003G109100 Sobic004G052900--Sobic003G109100 Sobic007G024700 Sobic007G024700 Sobic004G052900--Sobic007G024700 Sobic003G100800 Sobic003G100800 Sobic004G052900--Sobic003G100800 Sobic004G052900--Sobic007G172400 Sobic004G052900--Sobic002G340100 Sobic002G419800 Sobic002G419800 Sobic004G052900--Sobic002G419800 Sobic004G052900--Sobic006G245400 Sobic001G248300 Sobic001G248300 Sobic004G052900--Sobic001G248300 Sobic009G094300 Sobic009G094300 Sobic004G052900--Sobic009G094300 Sobic001G474600--Sobic003G280800 Sobic001G474600--Sobic009G166300 Sobic001G125200 Sobic001G125200 Sobic001G474600--Sobic001G125200 Sobic003G372700 Sobic003G372700 Sobic001G474600--Sobic003G372700 Sobic001G474600--Sobic007G217000 Sobic007G096000 Sobic007G096000 Sobic001G474600--Sobic007G096000 Sobic007G207000 Sobic007G207000 Sobic001G474600--Sobic007G207000 Sobic001G474600--Sobic009G191000 Sobic001G241200 Sobic001G241200 Sobic001G474600--Sobic001G241200
Octagon: transcription factors


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