Gene annotation
Transcriptome id Sobic.001G497300.1
Synonym EDR1, Sb01g046460, ATEDR1
Functional annotation protein kinase domain containing protein, expressed
UniProt C5WWZ5
Pfam PF07714 PF14381
Panther DB PTHR23257 PTHR23257:SF335
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G08720 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g06410.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a056630 , Zm00025a000750 , Zm00025a053452
Brachypodium KQJ96788 , KQK23540
Barley HORVU4Hr1G073290.12 , HORVU4Hr1G073290.9 , HORVU4Hr1G073290.8 , HORVU4Hr1G073290.5 , HORVU4Hr1G073290.4 , HORVU4Hr1G073290.7 , HORVU4Hr1G073290.6 , HORVU4Hr1G073290.1 , HORVU4Hr1G073290.3 , HORVU4Hr1G073290.2
Wheat TraesCS4A02G029800 , TraesCS4A02G029800 , TraesCS4D02G274400 , TraesCS4D02G274400 , TraesCS1B02G154400 , TraesCS4B02G276200 , TraesCS4B02G276200 , TraesCS1A02G131600 , TraesCS1D02G136400 , TraesCS1D02G136400
Populus PNT18313 , PNT18312 , PNT18311


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G104800 expressed protein -
2 Sobic.001G512700 myb/SANT domain protein, putative, expressed -
3 Sobic.002G006900 tetratricopeptide repeat domain containing protein, expressed -
4 Sobic.006G237400 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
5 Sobic.004G205600 bromodomain domain containing protein, expressed -
6 Sobic.001G413500 expressed protein -
7 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
8 Sobic.005G023900 expressed protein -
9 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
10 Sobic.003G200200 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
11 Sobic.003G029700 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
12 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
13 Sobic.003G397800 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
14 Sobic.007G200600 ZOS8-11 - C2H2 zinc finger protein, expressed -
15 Sobic.008G173900 "OsPPKL3(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659913)@serine/threonine-protein phosphatase BSL2, putative, expressed -
16 Sobic.002G248400 ENT domain containing protein, expressed -
17 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
18 Sobic.007G026300 pre-mRNA-splicing factor SLU7, putative, expressed K12819: pre-mRNA-processing factor SLU7
19 Sobic.003G187400 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
20 Sobic.004G240800 protein kinase domain containing protein, expressed -


Gene co-expression network
sample Sobic001G497300 Sobic001G497300 Sobic007G104800 Sobic007G104800 Sobic001G497300--Sobic007G104800 Sobic001G512700 Sobic001G512700 Sobic001G497300--Sobic001G512700 Sobic002G006900 Sobic002G006900 Sobic001G497300--Sobic002G006900 Sobic006G237400 Sobic006G237400 Sobic001G497300--Sobic006G237400 Sobic004G205600 Sobic004G205600 Sobic001G497300--Sobic004G205600 Sobic001G413500 Sobic001G413500 Sobic001G497300--Sobic001G413500 Sobic008G047800 Sobic008G047800 Sobic001G497300--Sobic008G047800 Sobic005G023900 Sobic005G023900 Sobic001G497300--Sobic005G023900 Sobic002G157000 Sobic002G157000 Sobic001G497300--Sobic002G157000 Sobic007G104800--Sobic001G497300 Sobic004G021100 Sobic004G021100 Sobic007G104800--Sobic004G021100 Sobic001G119300 Sobic001G119300 Sobic007G104800--Sobic001G119300 Sobic003G187400 Sobic003G187400 Sobic007G104800--Sobic003G187400 Sobic007G200600 Sobic007G200600 Sobic007G104800--Sobic007G200600 Sobic007G104800--Sobic001G512700 Sobic007G104800--Sobic004G205600 Sobic007G026300 Sobic007G026300 Sobic007G104800--Sobic007G026300 Sobic001G107500 Sobic001G107500 Sobic007G104800--Sobic001G107500 Sobic001G512700--Sobic008G047800 Sobic001G512700--Sobic002G006900 Sobic003G248200 Sobic003G248200 Sobic001G512700--Sobic003G248200 Sobic001G512700--Sobic001G497300 Sobic007G118600 Sobic007G118600 Sobic001G512700--Sobic007G118600 Sobic001G512700--Sobic004G021100 Sobic005G045300 Sobic005G045300 Sobic001G512700--Sobic005G045300 Sobic002G297200 Sobic002G297200 Sobic001G512700--Sobic002G297200 Sobic008G067600 Sobic008G067600 Sobic001G512700--Sobic008G067600 Sobic002G006900--Sobic008G047800 Sobic007G065400 Sobic007G065400 Sobic002G006900--Sobic007G065400 Sobic003G200200 Sobic003G200200 Sobic002G006900--Sobic003G200200 Sobic003G372700 Sobic003G372700 Sobic002G006900--Sobic003G372700 Sobic009G040600 Sobic009G040600 Sobic002G006900--Sobic009G040600 Sobic001G155000 Sobic001G155000 Sobic002G006900--Sobic001G155000 Sobic002G309600 Sobic002G309600 Sobic002G006900--Sobic002G309600 Sobic001G214300 Sobic001G214300 Sobic002G006900--Sobic001G214300 Sobic002G006900--Sobic001G512700 Sobic006G237400--Sobic001G497300 Sobic006G237400--Sobic008G047800 Sobic003G029700 Sobic003G029700 Sobic006G237400--Sobic003G029700 Sobic009G249200 Sobic009G249200 Sobic006G237400--Sobic009G249200 Sobic007G217000 Sobic007G217000 Sobic006G237400--Sobic007G217000 Sobic001G253700 Sobic001G253700 Sobic006G237400--Sobic001G253700 Sobic002G310200 Sobic002G310200 Sobic006G237400--Sobic002G310200 Sobic001G474600 Sobic001G474600 Sobic006G237400--Sobic001G474600 Sobic001G220300 Sobic001G220300 Sobic006G237400--Sobic001G220300 Sobic004G057400 Sobic004G057400 Sobic004G205600--Sobic004G057400 Sobic004G205600--Sobic001G497300 Sobic001G090400 Sobic001G090400 Sobic004G205600--Sobic001G090400 Sobic003G081000 Sobic003G081000 Sobic004G205600--Sobic003G081000 Sobic004G205600--Sobic007G026300 Sobic009G000500 Sobic009G000500 Sobic004G205600--Sobic009G000500 Sobic002G157300 Sobic002G157300 Sobic004G205600--Sobic002G157300 Sobic009G065100 Sobic009G065100 Sobic004G205600--Sobic009G065100 Sobic004G205600--Sobic002G157000 Sobic009G083900 Sobic009G083900 Sobic001G413500--Sobic009G083900 Sobic008G173900 Sobic008G173900 Sobic001G413500--Sobic008G173900 Sobic001G413500--Sobic002G157000 Sobic004G240800 Sobic004G240800 Sobic001G413500--Sobic004G240800 Sobic001G413500--Sobic001G497300 Sobic001G413500--Sobic005G023900 Sobic001G413500--Sobic003G200200 Sobic004G145500 Sobic004G145500 Sobic001G413500--Sobic004G145500 Sobic003G268300 Sobic003G268300 Sobic001G413500--Sobic003G268300 Sobic008G047800--Sobic002G006900 Sobic004G084300 Sobic004G084300 Sobic008G047800--Sobic004G084300 Sobic008G047800--Sobic001G512700 Sobic008G047800--Sobic001G155000 Sobic008G047800--Sobic009G040600 Sobic007G011300 Sobic007G011300 Sobic008G047800--Sobic007G011300 Sobic008G047800--Sobic007G217000 Sobic004G274200 Sobic004G274200 Sobic008G047800--Sobic004G274200 Sobic008G047800--Sobic002G309600 Sobic005G023900--Sobic002G157000 Sobic005G023900--Sobic003G200200 Sobic005G023900--Sobic001G413500 Sobic005G023900--Sobic001G497300 Sobic005G023900--Sobic002G006900 Sobic001G486300 Sobic001G486300 Sobic005G023900--Sobic001G486300 Sobic005G023900--Sobic003G268300 Sobic005G023900--Sobic007G065400 Sobic009G210500 Sobic009G210500 Sobic005G023900--Sobic009G210500 Sobic002G248400 Sobic002G248400 Sobic002G157000--Sobic002G248400 Sobic002G320500 Sobic002G320500 Sobic002G157000--Sobic002G320500 Sobic002G157000--Sobic003G200200 Sobic001G420200 Sobic001G420200 Sobic002G157000--Sobic001G420200 Sobic002G157000--Sobic008G173900 Sobic002G157000--Sobic003G268300 Sobic001G162300 Sobic001G162300 Sobic002G157000--Sobic001G162300 Sobic003G108700 Sobic003G108700 Sobic002G157000--Sobic003G108700 Sobic001G094000 Sobic001G094000 Sobic002G157000--Sobic001G094000
Octagon: transcription factors


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