Gene annotation
Transcriptome id Sobic.007G104800.2,Sobic.007G104800.1
Synonym Sb07g014630
Functional annotation expressed protein
UniProt C5YK64
Pfam -
Panther DB PTHR36048 PTHR36048:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G10970 : -
RAP-DB (Rice) LOC_Os08g28690.1 : expressed protein
MaizeGDB (Corn) Zm00025a006154 , Zm00025a030956
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G104800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G497300 protein kinase domain containing protein, expressed -
2 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
3 Sobic.001G119300 mRNA cap guanine-N7 methyltransferase 1, putative, expressed K00565: mRNA (guanine-N7-)-methyltransferase
4 Sobic.003G187400 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
5 Sobic.007G200600 ZOS8-11 - C2H2 zinc finger protein, expressed -
6 Sobic.001G512700 myb/SANT domain protein, putative, expressed -
7 Sobic.004G205600 bromodomain domain containing protein, expressed -
8 Sobic.007G026300 pre-mRNA-splicing factor SLU7, putative, expressed K12819: pre-mRNA-processing factor SLU7
9 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
10 Sobic.007G132400 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
11 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA
12 Sobic.010G260500 pre-mRNA-splicing factor syf2, putative, expressed K12868: pre-mRNA-splicing factor SYF2
13 Sobic.003G397800 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
14 Sobic.009G056800 growth inhibition and differentiation-related protein 88, putative, expressed -
15 Sobic.009G205200 OsFBX170 - F-box domain containing protein, expressed -
16 Sobic.010G101800 dynamin, putative, expressed K01528: dynamin 1/3
17 Sobic.002G399100 zinc finger, RING-type, putative, expressed K15688: E3 ubiquitin-protein ligase MUL1
18 Sobic.006G173100 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
19 Sobic.003G298100 one zinc finger protein, putative, expressed -
20 Sobic.003G200200 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3


Gene co-expression network
sample Sobic007G104800 Sobic007G104800 Sobic001G497300 Sobic001G497300 Sobic007G104800--Sobic001G497300 Sobic004G021100 Sobic004G021100 Sobic007G104800--Sobic004G021100 Sobic001G119300 Sobic001G119300 Sobic007G104800--Sobic001G119300 Sobic003G187400 Sobic003G187400 Sobic007G104800--Sobic003G187400 Sobic007G200600 Sobic007G200600 Sobic007G104800--Sobic007G200600 Sobic001G512700 Sobic001G512700 Sobic007G104800--Sobic001G512700 Sobic004G205600 Sobic004G205600 Sobic007G104800--Sobic004G205600 Sobic007G026300 Sobic007G026300 Sobic007G104800--Sobic007G026300 Sobic001G107500 Sobic001G107500 Sobic007G104800--Sobic001G107500 Sobic001G497300--Sobic007G104800 Sobic001G497300--Sobic001G512700 Sobic002G006900 Sobic002G006900 Sobic001G497300--Sobic002G006900 Sobic006G237400 Sobic006G237400 Sobic001G497300--Sobic006G237400 Sobic001G497300--Sobic004G205600 Sobic001G413500 Sobic001G413500 Sobic001G497300--Sobic001G413500 Sobic008G047800 Sobic008G047800 Sobic001G497300--Sobic008G047800 Sobic005G023900 Sobic005G023900 Sobic001G497300--Sobic005G023900 Sobic002G157000 Sobic002G157000 Sobic001G497300--Sobic002G157000 Sobic009G056800 Sobic009G056800 Sobic004G021100--Sobic009G056800 Sobic004G021100--Sobic007G026300 Sobic004G021100--Sobic001G512700 Sobic006G173100 Sobic006G173100 Sobic004G021100--Sobic006G173100 Sobic004G021100--Sobic007G104800 Sobic004G274200 Sobic004G274200 Sobic004G021100--Sobic004G274200 Sobic004G021100--Sobic004G205600 Sobic004G021100--Sobic003G187400 Sobic007G118600 Sobic007G118600 Sobic004G021100--Sobic007G118600 Sobic001G119300--Sobic007G104800 Sobic001G119300--Sobic007G200600 Sobic001G119300--Sobic007G026300 Sobic002G350300 Sobic002G350300 Sobic001G119300--Sobic002G350300 Sobic006G088100 Sobic006G088100 Sobic001G119300--Sobic006G088100 Sobic009G205200 Sobic009G205200 Sobic001G119300--Sobic009G205200 Sobic002G200100 Sobic002G200100 Sobic001G119300--Sobic002G200100 Sobic001G371200 Sobic001G371200 Sobic001G119300--Sobic001G371200 Sobic002G090800 Sobic002G090800 Sobic001G119300--Sobic002G090800 Sobic002G157300 Sobic002G157300 Sobic003G187400--Sobic002G157300 Sobic005G149500 Sobic005G149500 Sobic003G187400--Sobic005G149500 Sobic009G040700 Sobic009G040700 Sobic003G187400--Sobic009G040700 Sobic001G094000 Sobic001G094000 Sobic003G187400--Sobic001G094000 Sobic003G187400--Sobic006G173100 Sobic006G060100 Sobic006G060100 Sobic003G187400--Sobic006G060100 Sobic003G401000 Sobic003G401000 Sobic003G187400--Sobic003G401000 Sobic004G196700 Sobic004G196700 Sobic003G187400--Sobic004G196700 Sobic003G187400--Sobic007G104800 Sobic007G200600--Sobic007G104800 Sobic007G200600--Sobic001G119300 Sobic007G200600--Sobic001G497300 Sobic007G200600--Sobic007G026300 Sobic007G200600--Sobic003G187400 Sobic007G200600--Sobic004G021100 Sobic007G200600--Sobic001G512700 Sobic007G132400 Sobic007G132400 Sobic007G200600--Sobic007G132400 Sobic004G084300 Sobic004G084300 Sobic007G200600--Sobic004G084300 Sobic001G512700--Sobic008G047800 Sobic001G512700--Sobic002G006900 Sobic003G248200 Sobic003G248200 Sobic001G512700--Sobic003G248200 Sobic001G512700--Sobic001G497300 Sobic001G512700--Sobic007G118600 Sobic001G512700--Sobic004G021100 Sobic005G045300 Sobic005G045300 Sobic001G512700--Sobic005G045300 Sobic002G297200 Sobic002G297200 Sobic001G512700--Sobic002G297200 Sobic008G067600 Sobic008G067600 Sobic001G512700--Sobic008G067600 Sobic004G057400 Sobic004G057400 Sobic004G205600--Sobic004G057400 Sobic004G205600--Sobic001G497300 Sobic001G090400 Sobic001G090400 Sobic004G205600--Sobic001G090400 Sobic003G081000 Sobic003G081000 Sobic004G205600--Sobic003G081000 Sobic004G205600--Sobic007G026300 Sobic009G000500 Sobic009G000500 Sobic004G205600--Sobic009G000500 Sobic004G205600--Sobic002G157300 Sobic009G065100 Sobic009G065100 Sobic004G205600--Sobic009G065100 Sobic004G205600--Sobic002G157000 Sobic007G026300--Sobic004G021100 Sobic007G026300--Sobic004G205600 Sobic007G026300--Sobic001G512700 Sobic007G026300--Sobic007G104800 Sobic004G257400 Sobic004G257400 Sobic007G026300--Sobic004G257400 Sobic007G026300--Sobic001G497300 Sobic007G026300--Sobic007G200600 Sobic007G026300--Sobic001G090400 Sobic007G026300--Sobic004G057400 Sobic002G320500 Sobic002G320500 Sobic001G107500--Sobic002G320500 Sobic006G133800 Sobic006G133800 Sobic001G107500--Sobic006G133800 Sobic001G107500--Sobic002G157000 Sobic001G107500--Sobic009G065100 Sobic001G107500--Sobic001G090400 Sobic010G056200 Sobic010G056200 Sobic001G107500--Sobic010G056200 Sobic001G107500--Sobic001G497300 Sobic001G107500--Sobic007G104800 Sobic001G107500--Sobic004G205600
Octagon: transcription factors


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