Gene annotation
Transcriptome id Sobic.001G119300.1
Synonym Sb01g010530
Functional annotation mRNA cap guanine-N7 methyltransferase 1, putative, expressed
UniProt C5WNP9
Pfam PF08241
Panther DB PTHR12189
NCBI CDD KOG1975; mRNA cap methyltransferase
KEGG Orthology K00565; mRNA (guanine-N7-)-methyltransferase
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G20650 : mRNA capping enzyme family protein
RAP-DB (Rice) LOC_Os08g08200.1 : mRNA cap guanine-N7 methyltransferase 1, putative, expressed
MaizeGDB (Corn) Zm00025a007812
Brachypodium KQJ95147 , PNT76911
Barley HORVU6Hr1G073220.2 , HORVU6Hr1G073220.3 , HORVU6Hr1G073220.1 , HORVU6Hr1G073220.6 , HORVU6Hr1G073220.7 , HORVU6Hr1G073220.4 , HORVU6Hr1G073220.5 , HORVU6Hr1G073220.8 , HORVU6Hr1G073220.9 , HORVU6Hr1G073220.10 , HORVU6Hr1G073220.11
Wheat TraesCS6B02G323500 , TraesCS6B02G323500 , TraesCS1A02G115100 , TraesCS6A02G293300 , TraesCS1D02G116500 , TraesCS6D02G274200 , TraesCS1B02G135000
Populus -


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cDNA sequences
Sobic.001G119300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G104800 expressed protein -
2 Sobic.007G200600 ZOS8-11 - C2H2 zinc finger protein, expressed -
3 Sobic.007G026300 pre-mRNA-splicing factor SLU7, putative, expressed K12819: pre-mRNA-processing factor SLU7
4 Sobic.002G350300 gamma response I protein, putative, expressed K13096: splicing factor 4
5 Sobic.006G088100 coiled-coil domain-containing protein 55, putative, expressed K13206: coiled-coil domain-containing protein 55
6 Sobic.009G205200 OsFBX170 - F-box domain containing protein, expressed -
7 Sobic.002G200100 AGAP000554-PA, putative, expressed -
8 Sobic.001G371200 SAC3/GANP family protein, putative, expressed -
9 Sobic.002G090800 expressed protein -
10 Sobic.001G497300 protein kinase domain containing protein, expressed -
11 Sobic.008G179700 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
12 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
13 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
14 Sobic.004G205600 bromodomain domain containing protein, expressed -
15 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
16 Sobic.006G173100 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
17 Sobic.001G512700 myb/SANT domain protein, putative, expressed -
18 Sobic.001G291100 tetraspanin family protein, putative, expressed -
19 Sobic.003G250500 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
20 Sobic.007G132400 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4


Gene co-expression network
sample Sobic001G119300 Sobic001G119300 Sobic007G104800 Sobic007G104800 Sobic001G119300--Sobic007G104800 Sobic007G200600 Sobic007G200600 Sobic001G119300--Sobic007G200600 Sobic007G026300 Sobic007G026300 Sobic001G119300--Sobic007G026300 Sobic002G350300 Sobic002G350300 Sobic001G119300--Sobic002G350300 Sobic006G088100 Sobic006G088100 Sobic001G119300--Sobic006G088100 Sobic009G205200 Sobic009G205200 Sobic001G119300--Sobic009G205200 Sobic002G200100 Sobic002G200100 Sobic001G119300--Sobic002G200100 Sobic001G371200 Sobic001G371200 Sobic001G119300--Sobic001G371200 Sobic002G090800 Sobic002G090800 Sobic001G119300--Sobic002G090800 Sobic001G497300 Sobic001G497300 Sobic007G104800--Sobic001G497300 Sobic004G021100 Sobic004G021100 Sobic007G104800--Sobic004G021100 Sobic007G104800--Sobic001G119300 Sobic003G187400 Sobic003G187400 Sobic007G104800--Sobic003G187400 Sobic007G104800--Sobic007G200600 Sobic001G512700 Sobic001G512700 Sobic007G104800--Sobic001G512700 Sobic004G205600 Sobic004G205600 Sobic007G104800--Sobic004G205600 Sobic007G104800--Sobic007G026300 Sobic001G107500 Sobic001G107500 Sobic007G104800--Sobic001G107500 Sobic007G200600--Sobic007G104800 Sobic007G200600--Sobic001G119300 Sobic007G200600--Sobic001G497300 Sobic007G200600--Sobic007G026300 Sobic007G200600--Sobic003G187400 Sobic007G200600--Sobic004G021100 Sobic007G200600--Sobic001G512700 Sobic007G132400 Sobic007G132400 Sobic007G200600--Sobic007G132400 Sobic004G084300 Sobic004G084300 Sobic007G200600--Sobic004G084300 Sobic007G026300--Sobic004G021100 Sobic007G026300--Sobic004G205600 Sobic007G026300--Sobic001G512700 Sobic007G026300--Sobic007G104800 Sobic004G257400 Sobic004G257400 Sobic007G026300--Sobic004G257400 Sobic007G026300--Sobic001G497300 Sobic007G026300--Sobic007G200600 Sobic001G090400 Sobic001G090400 Sobic007G026300--Sobic001G090400 Sobic004G057400 Sobic004G057400 Sobic007G026300--Sobic004G057400 Sobic008G179700 Sobic008G179700 Sobic002G350300--Sobic008G179700 Sobic002G350300--Sobic009G205200 Sobic009G179700 Sobic009G179700 Sobic002G350300--Sobic009G179700 Sobic002G350300--Sobic001G107500 Sobic002G350300--Sobic001G512700 Sobic002G350300--Sobic007G132400 Sobic010G028300 Sobic010G028300 Sobic002G350300--Sobic010G028300 Sobic002G350300--Sobic001G119300 Sobic002G350300--Sobic006G088100 Sobic001G056200 Sobic001G056200 Sobic006G088100--Sobic001G056200 Sobic004G263900 Sobic004G263900 Sobic006G088100--Sobic004G263900 Sobic003G202800 Sobic003G202800 Sobic006G088100--Sobic003G202800 Sobic003G437500 Sobic003G437500 Sobic006G088100--Sobic003G437500 Sobic003G261300 Sobic003G261300 Sobic006G088100--Sobic003G261300 Sobic006G209500 Sobic006G209500 Sobic006G088100--Sobic006G209500 Sobic006G088100--Sobic001G119300 Sobic006G088100--Sobic002G350300 Sobic006G128800 Sobic006G128800 Sobic006G088100--Sobic006G128800 Sobic004G121100 Sobic004G121100 Sobic009G205200--Sobic004G121100 Sobic009G205200--Sobic001G107500 Sobic009G205200--Sobic002G350300 Sobic009G205200--Sobic007G104800 Sobic006G200600 Sobic006G200600 Sobic009G205200--Sobic006G200600 Sobic003G345400 Sobic003G345400 Sobic009G205200--Sobic003G345400 Sobic009G205200--Sobic001G119300 Sobic003G248200 Sobic003G248200 Sobic009G205200--Sobic003G248200 Sobic009G205200--Sobic008G179700 Sobic006G173100 Sobic006G173100 Sobic002G200100--Sobic006G173100 Sobic002G200100--Sobic001G119300 Sobic002G200100--Sobic004G021100 Sobic002G010300 Sobic002G010300 Sobic002G200100--Sobic002G010300 Sobic004G350100 Sobic004G350100 Sobic002G200100--Sobic004G350100 Sobic004G007300 Sobic004G007300 Sobic002G200100--Sobic004G007300 Sobic002G200100--Sobic004G205600 Sobic002G200100--Sobic007G026300 Sobic002G200100--Sobic007G104800 Sobic007G118200 Sobic007G118200 Sobic001G371200--Sobic007G118200 Sobic002G313500 Sobic002G313500 Sobic001G371200--Sobic002G313500 Sobic001G466700 Sobic001G466700 Sobic001G371200--Sobic001G466700 Sobic006G252700 Sobic006G252700 Sobic001G371200--Sobic006G252700 Sobic006G278700 Sobic006G278700 Sobic001G371200--Sobic006G278700 Sobic002G378200 Sobic002G378200 Sobic001G371200--Sobic002G378200 Sobic001G371200--Sobic007G200600 Sobic003G081000 Sobic003G081000 Sobic001G371200--Sobic003G081000 Sobic004G283000 Sobic004G283000 Sobic001G371200--Sobic004G283000 Sobic002G090800--Sobic004G057400 Sobic009G257800 Sobic009G257800 Sobic002G090800--Sobic009G257800 Sobic002G090800--Sobic003G081000 Sobic002G090800--Sobic004G205600 Sobic004G345700 Sobic004G345700 Sobic002G090800--Sobic004G345700 Sobic009G198100 Sobic009G198100 Sobic002G090800--Sobic009G198100 Sobic004G240800 Sobic004G240800 Sobic002G090800--Sobic004G240800 Sobic010G033400 Sobic010G033400 Sobic002G090800--Sobic010G033400 Sobic007G205800 Sobic007G205800 Sobic002G090800--Sobic007G205800
Octagon: transcription factors


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