Gene annotation
Transcriptome id Sobic.001G291100.2,Sobic.001G291100.1
Synonym Sb01g028500, TOM2A
Functional annotation tetraspanin family protein, putative, expressed
UniProt A0A1B6QLV0
Pfam PF00335
Panther DB PTHR19282 PTHR19282:SF262
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G32400 : tobamovirus multiplication 2A
RAP-DB (Rice) LOC_Os08g18044.2 : tetraspanin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a003449 , Zm00025a051860
Brachypodium KQJ96443 , KQJ96444
Barley HORVU1Hr1G034980.1 , HORVU1Hr1G034980.3 , HORVU1Hr1G034980.2 , HORVU1Hr1G034980.5 , HORVU1Hr1G034980.4 , HORVU1Hr1G034980.7 , HORVU1Hr1G034980.6 , HORVU1Hr1G034980.9 , HORVU1Hr1G034980.8 , HORVU1Hr1G034980.11 , HORVU1Hr1G034980.10
Wheat TraesCS1B02G148900 , TraesCS1A02G137700 , TraesCS1A02G137700 , TraesCS1D02G133700
Populus -


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cDNA sequences
Sobic.001G291100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G157200 OsFBL23 - F-box domain and LRR containing protein, expressed K13463: coronatine-insensitive protein 1
2 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
3 Sobic.004G119000 OsFBK6 - F-box domain and kelch repeat containing protein, expressed -
4 Sobic.010G056200 WD-40 repeat family protein, putative, expressed -
5 Sobic.001G119300 mRNA cap guanine-N7 methyltransferase 1, putative, expressed K00565: mRNA (guanine-N7-)-methyltransferase
6 Sobic.004G150400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
7 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
8 Sobic.006G088100 coiled-coil domain-containing protein 55, putative, expressed K13206: coiled-coil domain-containing protein 55
9 Sobic.004G083700 expressed protein -
10 Sobic.003G250500 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
11 Sobic.001G464100 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
12 Sobic.010G146600 cyclin-dependent kinase F-1, putative, expressed -
13 Sobic.003G345400 NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
14 Sobic.001G467000 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
15 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
16 Sobic.010G268300 protein phosphatase 2C, putative, expressed -
17 Sobic.002G090800 expressed protein -
18 Sobic.006G209500 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
19 Sobic.009G259400 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
20 Sobic.010G249300 Ser/Thr protein phosphatase family protein, putative, expressed -


Gene co-expression network
sample Sobic001G291100 Sobic001G291100 Sobic009G157200 Sobic009G157200 Sobic001G291100--Sobic009G157200 Sobic001G281600 Sobic001G281600 Sobic001G291100--Sobic001G281600 Sobic004G119000 Sobic004G119000 Sobic001G291100--Sobic004G119000 Sobic010G056200 Sobic010G056200 Sobic001G291100--Sobic010G056200 Sobic001G119300 Sobic001G119300 Sobic001G291100--Sobic001G119300 Sobic004G150400 Sobic004G150400 Sobic001G291100--Sobic004G150400 Sobic001G107500 Sobic001G107500 Sobic001G291100--Sobic001G107500 Sobic006G088100 Sobic006G088100 Sobic001G291100--Sobic006G088100 Sobic004G083700 Sobic004G083700 Sobic001G291100--Sobic004G083700 Sobic009G157200--Sobic001G291100 Sobic009G157200--Sobic010G056200 Sobic003G084700 Sobic003G084700 Sobic009G157200--Sobic003G084700 Sobic009G157200--Sobic001G281600 Sobic003G018900 Sobic003G018900 Sobic009G157200--Sobic003G018900 Sobic003G250500 Sobic003G250500 Sobic009G157200--Sobic003G250500 Sobic006G273200 Sobic006G273200 Sobic009G157200--Sobic006G273200 Sobic007G078500 Sobic007G078500 Sobic009G157200--Sobic007G078500 Sobic004G205600 Sobic004G205600 Sobic009G157200--Sobic004G205600 Sobic010G279700 Sobic010G279700 Sobic001G281600--Sobic010G279700 Sobic001G281600--Sobic007G078500 Sobic006G200600 Sobic006G200600 Sobic001G281600--Sobic006G200600 Sobic003G401100 Sobic003G401100 Sobic001G281600--Sobic003G401100 Sobic004G121100 Sobic004G121100 Sobic001G281600--Sobic004G121100 Sobic009G215800 Sobic009G215800 Sobic001G281600--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic001G281600--Sobic004G084300 Sobic009G050900 Sobic009G050900 Sobic001G281600--Sobic009G050900 Sobic008G179700 Sobic008G179700 Sobic001G281600--Sobic008G179700 Sobic004G119000--Sobic004G150400 Sobic010G280100 Sobic010G280100 Sobic004G119000--Sobic010G280100 Sobic004G119000--Sobic001G291100 Sobic003G185200 Sobic003G185200 Sobic004G119000--Sobic003G185200 Sobic002G272800 Sobic002G272800 Sobic004G119000--Sobic002G272800 Sobic009G087800 Sobic009G087800 Sobic004G119000--Sobic009G087800 Sobic010G268300 Sobic010G268300 Sobic004G119000--Sobic010G268300 Sobic002G365100 Sobic002G365100 Sobic004G119000--Sobic002G365100 Sobic007G205800 Sobic007G205800 Sobic004G119000--Sobic007G205800 Sobic010G056200--Sobic001G107500 Sobic004G113800 Sobic004G113800 Sobic010G056200--Sobic004G113800 Sobic010G056200--Sobic004G083700 Sobic007G052900 Sobic007G052900 Sobic010G056200--Sobic007G052900 Sobic003G324000 Sobic003G324000 Sobic010G056200--Sobic003G324000 Sobic009G065100 Sobic009G065100 Sobic010G056200--Sobic009G065100 Sobic006G228500 Sobic006G228500 Sobic010G056200--Sobic006G228500 Sobic002G309800 Sobic002G309800 Sobic010G056200--Sobic002G309800 Sobic010G056200--Sobic009G157200 Sobic007G104800 Sobic007G104800 Sobic001G119300--Sobic007G104800 Sobic007G200600 Sobic007G200600 Sobic001G119300--Sobic007G200600 Sobic007G026300 Sobic007G026300 Sobic001G119300--Sobic007G026300 Sobic002G350300 Sobic002G350300 Sobic001G119300--Sobic002G350300 Sobic001G119300--Sobic006G088100 Sobic009G205200 Sobic009G205200 Sobic001G119300--Sobic009G205200 Sobic002G200100 Sobic002G200100 Sobic001G119300--Sobic002G200100 Sobic001G371200 Sobic001G371200 Sobic001G119300--Sobic001G371200 Sobic002G090800 Sobic002G090800 Sobic001G119300--Sobic002G090800 Sobic004G150400--Sobic004G119000 Sobic010G055500 Sobic010G055500 Sobic004G150400--Sobic010G055500 Sobic004G150400--Sobic007G205800 Sobic004G150400--Sobic002G272800 Sobic010G071200 Sobic010G071200 Sobic004G150400--Sobic010G071200 Sobic001G028400 Sobic001G028400 Sobic004G150400--Sobic001G028400 Sobic004G150400--Sobic006G088100 Sobic003G093600 Sobic003G093600 Sobic004G150400--Sobic003G093600 Sobic006G109300 Sobic006G109300 Sobic004G150400--Sobic006G109300 Sobic002G320500 Sobic002G320500 Sobic001G107500--Sobic002G320500 Sobic006G133800 Sobic006G133800 Sobic001G107500--Sobic006G133800 Sobic002G157000 Sobic002G157000 Sobic001G107500--Sobic002G157000 Sobic001G107500--Sobic009G065100 Sobic001G090400 Sobic001G090400 Sobic001G107500--Sobic001G090400 Sobic001G107500--Sobic010G056200 Sobic001G497300 Sobic001G497300 Sobic001G107500--Sobic001G497300 Sobic001G107500--Sobic007G104800 Sobic001G107500--Sobic004G205600 Sobic001G056200 Sobic001G056200 Sobic006G088100--Sobic001G056200 Sobic004G263900 Sobic004G263900 Sobic006G088100--Sobic004G263900 Sobic003G202800 Sobic003G202800 Sobic006G088100--Sobic003G202800 Sobic003G437500 Sobic003G437500 Sobic006G088100--Sobic003G437500 Sobic003G261300 Sobic003G261300 Sobic006G088100--Sobic003G261300 Sobic006G209500 Sobic006G209500 Sobic006G088100--Sobic006G209500 Sobic006G088100--Sobic001G119300 Sobic006G088100--Sobic002G350300 Sobic006G128800 Sobic006G128800 Sobic006G088100--Sobic006G128800 Sobic004G083700--Sobic010G056200 Sobic004G083700--Sobic007G052900 Sobic007G108500 Sobic007G108500 Sobic004G083700--Sobic007G108500 Sobic003G309900 Sobic003G309900 Sobic004G083700--Sobic003G309900 Sobic004G083700--Sobic002G309800 Sobic004G083700--Sobic010G280100 Sobic004G083700--Sobic001G291100 Sobic002G122600 Sobic002G122600 Sobic004G083700--Sobic002G122600 Sobic009G198900 Sobic009G198900 Sobic004G083700--Sobic009G198900
Octagon: transcription factors


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