Gene annotation
Transcriptome id Sobic.003G345400.1
Synonym Sb03g038910
Functional annotation NLI interacting factor-like phosphatase, putative, expressed
UniProt C5XP07
Pfam PF03031
Panther DB PTHR12210 PTHR12210:SF68
NCBI CDD -
KEGG Orthology K15731; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G55960 : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RAP-DB (Rice) LOC_Os01g61640.1 : NLI interacting factor-like phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a039719 , Zm00025a026991
Brachypodium KQK10435
Barley HORVU3Hr1G021280.1 , HORVU3Hr1G087530.4 , HORVU3Hr1G087530.5 , HORVU5Hr1G008070.1 , HORVU3Hr1G087530.6 , HORVU3Hr1G087530.7 , HORVU3Hr1G087530.1 , HORVU3Hr1G087530.2 , HORVU3Hr1G087530.3 , HORVU3Hr1G087530.8 , HORVU3Hr1G087530.9
Wheat TraesCS3D02G345900 , TraesCS3B02G384400 , TraesCS3B02G384400 , TraesCS3A02G351700 , TraesCS3A02G351700
Populus -


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cDNA sequences
Sobic.003G345400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G205200 OsFBX170 - F-box domain containing protein, expressed -
2 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
3 Sobic.002G350300 gamma response I protein, putative, expressed K13096: splicing factor 4
4 Sobic.004G121100 expressed protein -
5 Sobic.009G034200 CBL-interacting protein kinase 1(PubMedID : 26320239)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
6 Sobic.006G228500 coiled-coil domain-containing protein, putative, expressed K13115: coiled-coil domain-containing protein 130
7 Sobic.001G333200 RING zinc finger protein-like, putative, expressed -
8 Sobic.001G119300 mRNA cap guanine-N7 methyltransferase 1, putative, expressed K00565: mRNA (guanine-N7-)-methyltransferase
9 Sobic.010G056200 WD-40 repeat family protein, putative, expressed -
10 Sobic.007G104800 expressed protein -
11 Sobic.001G291100 tetraspanin family protein, putative, expressed -
12 Sobic.007G108500 lipid phosphatase protein, putative, expressed K18693: DPP1, DPPL, diacylglycerol diphosphate phosphatase / phosphatidate phosphatase
13 Sobic.009G259400 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
14 Sobic.001G497300 protein kinase domain containing protein, expressed -
15 Sobic.007G158300 phosphoglycerate mutase, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
16 Sobic.006G209500 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
17 Sobic.006G088100 coiled-coil domain-containing protein 55, putative, expressed K13206: coiled-coil domain-containing protein 55
18 Sobic.002G399100 zinc finger, RING-type, putative, expressed K15688: E3 ubiquitin-protein ligase MUL1
19 Sobic.001G375700 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
20 Sobic.003G298100 one zinc finger protein, putative, expressed -


Gene co-expression network
sample Sobic003G345400 Sobic003G345400 Sobic009G205200 Sobic009G205200 Sobic003G345400--Sobic009G205200 Sobic001G107500 Sobic001G107500 Sobic003G345400--Sobic001G107500 Sobic002G350300 Sobic002G350300 Sobic003G345400--Sobic002G350300 Sobic004G121100 Sobic004G121100 Sobic003G345400--Sobic004G121100 Sobic009G034200 Sobic009G034200 Sobic003G345400--Sobic009G034200 Sobic006G228500 Sobic006G228500 Sobic003G345400--Sobic006G228500 Sobic001G333200 Sobic001G333200 Sobic003G345400--Sobic001G333200 Sobic001G119300 Sobic001G119300 Sobic003G345400--Sobic001G119300 Sobic010G056200 Sobic010G056200 Sobic003G345400--Sobic010G056200 Sobic009G205200--Sobic004G121100 Sobic009G205200--Sobic001G107500 Sobic009G205200--Sobic002G350300 Sobic007G104800 Sobic007G104800 Sobic009G205200--Sobic007G104800 Sobic006G200600 Sobic006G200600 Sobic009G205200--Sobic006G200600 Sobic009G205200--Sobic003G345400 Sobic009G205200--Sobic001G119300 Sobic003G248200 Sobic003G248200 Sobic009G205200--Sobic003G248200 Sobic008G179700 Sobic008G179700 Sobic009G205200--Sobic008G179700 Sobic002G320500 Sobic002G320500 Sobic001G107500--Sobic002G320500 Sobic006G133800 Sobic006G133800 Sobic001G107500--Sobic006G133800 Sobic002G157000 Sobic002G157000 Sobic001G107500--Sobic002G157000 Sobic009G065100 Sobic009G065100 Sobic001G107500--Sobic009G065100 Sobic001G090400 Sobic001G090400 Sobic001G107500--Sobic001G090400 Sobic001G107500--Sobic010G056200 Sobic001G497300 Sobic001G497300 Sobic001G107500--Sobic001G497300 Sobic001G107500--Sobic007G104800 Sobic004G205600 Sobic004G205600 Sobic001G107500--Sobic004G205600 Sobic002G350300--Sobic008G179700 Sobic002G350300--Sobic009G205200 Sobic009G179700 Sobic009G179700 Sobic002G350300--Sobic009G179700 Sobic002G350300--Sobic001G107500 Sobic001G512700 Sobic001G512700 Sobic002G350300--Sobic001G512700 Sobic007G132400 Sobic007G132400 Sobic002G350300--Sobic007G132400 Sobic010G028300 Sobic010G028300 Sobic002G350300--Sobic010G028300 Sobic002G350300--Sobic001G119300 Sobic006G088100 Sobic006G088100 Sobic002G350300--Sobic006G088100 Sobic004G121100--Sobic009G205200 Sobic004G121100--Sobic006G200600 Sobic004G121100--Sobic006G228500 Sobic001G281600 Sobic001G281600 Sobic004G121100--Sobic001G281600 Sobic009G259400 Sobic009G259400 Sobic004G121100--Sobic009G259400 Sobic007G078500 Sobic007G078500 Sobic004G121100--Sobic007G078500 Sobic001G080700 Sobic001G080700 Sobic004G121100--Sobic001G080700 Sobic004G121100--Sobic002G350300 Sobic010G251000 Sobic010G251000 Sobic004G121100--Sobic010G251000 Sobic009G034200--Sobic003G345400 Sobic007G113800 Sobic007G113800 Sobic009G034200--Sobic007G113800 Sobic009G140500 Sobic009G140500 Sobic009G034200--Sobic009G140500 Sobic009G034200--Sobic006G228500 Sobic003G179201 Sobic003G179201 Sobic009G034200--Sobic003G179201 Sobic002G399100 Sobic002G399100 Sobic009G034200--Sobic002G399100 Sobic009G034200--Sobic010G056200 Sobic001G067850 Sobic001G067850 Sobic009G034200--Sobic001G067850 Sobic004G113800 Sobic004G113800 Sobic009G034200--Sobic004G113800 Sobic004G164400 Sobic004G164400 Sobic006G228500--Sobic004G164400 Sobic006G228500--Sobic004G121100 Sobic007G108500 Sobic007G108500 Sobic006G228500--Sobic007G108500 Sobic001G318432 Sobic001G318432 Sobic006G228500--Sobic001G318432 Sobic006G228500--Sobic001G107500 Sobic001G298600 Sobic001G298600 Sobic006G228500--Sobic001G298600 Sobic006G228500--Sobic010G056200 Sobic006G228500--Sobic009G065100 Sobic002G031400 Sobic002G031400 Sobic006G228500--Sobic002G031400 Sobic002G262600 Sobic002G262600 Sobic001G333200--Sobic002G262600 Sobic001G333200--Sobic001G107500 Sobic007G160600 Sobic007G160600 Sobic001G333200--Sobic007G160600 Sobic001G333200--Sobic006G088100 Sobic001G333200--Sobic002G350300 Sobic001G333200--Sobic003G345400 Sobic003G220200 Sobic003G220200 Sobic001G333200--Sobic003G220200 Sobic007G037100 Sobic007G037100 Sobic001G333200--Sobic007G037100 Sobic006G082600 Sobic006G082600 Sobic001G333200--Sobic006G082600 Sobic001G119300--Sobic007G104800 Sobic007G200600 Sobic007G200600 Sobic001G119300--Sobic007G200600 Sobic007G026300 Sobic007G026300 Sobic001G119300--Sobic007G026300 Sobic001G119300--Sobic002G350300 Sobic001G119300--Sobic006G088100 Sobic001G119300--Sobic009G205200 Sobic002G200100 Sobic002G200100 Sobic001G119300--Sobic002G200100 Sobic001G371200 Sobic001G371200 Sobic001G119300--Sobic001G371200 Sobic002G090800 Sobic002G090800 Sobic001G119300--Sobic002G090800 Sobic010G056200--Sobic001G107500 Sobic010G056200--Sobic004G113800 Sobic004G083700 Sobic004G083700 Sobic010G056200--Sobic004G083700 Sobic007G052900 Sobic007G052900 Sobic010G056200--Sobic007G052900 Sobic003G324000 Sobic003G324000 Sobic010G056200--Sobic003G324000 Sobic010G056200--Sobic009G065100 Sobic010G056200--Sobic006G228500 Sobic002G309800 Sobic002G309800 Sobic010G056200--Sobic002G309800 Sobic009G157200 Sobic009G157200 Sobic010G056200--Sobic009G157200
Octagon: transcription factors


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