Gene annotation
Transcriptome id Sobic.001G333200.4,Sobic.001G333200.3
Synonym Sb01g032180
Functional annotation RING zinc finger protein-like, putative, expressed
UniProt C5WWH5
Pfam PF13445
Panther DB PTHR13139 PTHR13139:SF47
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G29270 : RING/U-box superfamily protein
RAP-DB (Rice) LOC_Os03g31320.2 : RING zinc finger protein-like, putative, expressed
MaizeGDB (Corn) Zm00025a052204
Brachypodium KQK14427 , KQK14428
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G262600 protein kinase, putative, expressed K13436: pto-interacting protein 1
2 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
3 Sobic.007G160600 CAMK_CAMK_like.38 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
4 Sobic.006G088100 coiled-coil domain-containing protein 55, putative, expressed K13206: coiled-coil domain-containing protein 55
5 Sobic.002G350300 gamma response I protein, putative, expressed K13096: splicing factor 4
6 Sobic.003G345400 NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
7 Sobic.003G220200 protein kinase family protein, putative, expressed K17541: SCY1-like protein 2
8 Sobic.007G037100 MYB family transcription factor, putative, expressed -
9 Sobic.006G082600 OsFBX133 - F-box domain containing protein, expressed K10295: F-box protein 9
10 Sobic.001G251700 OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
11 Sobic.001G162300 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
12 Sobic.002G320500 MYB family transcription factor, putative, expressed -
13 Sobic.002G186000 CD2-binding protein-related, putative, expressed K13099: CD2BP2, CD2 antigen cytoplasmic tail-binding protein 2
14 Sobic.007G145200 serine esterase family protein, putative, expressed -
15 Sobic.003G298100 one zinc finger protein, putative, expressed -
16 Sobic.009G205200 OsFBX170 - F-box domain containing protein, expressed -
17 Sobic.007G137900 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
18 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
19 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
20 Sobic.009G232700 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit


Gene co-expression network
sample Sobic001G333200 Sobic001G333200 Sobic002G262600 Sobic002G262600 Sobic001G333200--Sobic002G262600 Sobic001G107500 Sobic001G107500 Sobic001G333200--Sobic001G107500 Sobic007G160600 Sobic007G160600 Sobic001G333200--Sobic007G160600 Sobic006G088100 Sobic006G088100 Sobic001G333200--Sobic006G088100 Sobic002G350300 Sobic002G350300 Sobic001G333200--Sobic002G350300 Sobic003G345400 Sobic003G345400 Sobic001G333200--Sobic003G345400 Sobic003G220200 Sobic003G220200 Sobic001G333200--Sobic003G220200 Sobic007G037100 Sobic007G037100 Sobic001G333200--Sobic007G037100 Sobic006G082600 Sobic006G082600 Sobic001G333200--Sobic006G082600 Sobic002G262600--Sobic001G333200 Sobic002G262600--Sobic002G350300 Sobic006G209500 Sobic006G209500 Sobic002G262600--Sobic006G209500 Sobic004G049100 Sobic004G049100 Sobic002G262600--Sobic004G049100 Sobic006G261800 Sobic006G261800 Sobic002G262600--Sobic006G261800 Sobic004G231400 Sobic004G231400 Sobic002G262600--Sobic004G231400 Sobic002G262600--Sobic006G088100 Sobic004G117900 Sobic004G117900 Sobic002G262600--Sobic004G117900 Sobic002G262600--Sobic007G160600 Sobic002G320500 Sobic002G320500 Sobic001G107500--Sobic002G320500 Sobic006G133800 Sobic006G133800 Sobic001G107500--Sobic006G133800 Sobic002G157000 Sobic002G157000 Sobic001G107500--Sobic002G157000 Sobic009G065100 Sobic009G065100 Sobic001G107500--Sobic009G065100 Sobic001G090400 Sobic001G090400 Sobic001G107500--Sobic001G090400 Sobic010G056200 Sobic010G056200 Sobic001G107500--Sobic010G056200 Sobic001G497300 Sobic001G497300 Sobic001G107500--Sobic001G497300 Sobic007G104800 Sobic007G104800 Sobic001G107500--Sobic007G104800 Sobic004G205600 Sobic004G205600 Sobic001G107500--Sobic004G205600 Sobic010G033400 Sobic010G033400 Sobic007G160600--Sobic010G033400 Sobic009G198100 Sobic009G198100 Sobic007G160600--Sobic009G198100 Sobic007G160600--Sobic001G333200 Sobic007G118200 Sobic007G118200 Sobic007G160600--Sobic007G118200 Sobic007G160600--Sobic003G220200 Sobic001G028400 Sobic001G028400 Sobic007G160600--Sobic001G028400 Sobic003G359300 Sobic003G359300 Sobic007G160600--Sobic003G359300 Sobic001G356500 Sobic001G356500 Sobic007G160600--Sobic001G356500 Sobic006G109300 Sobic006G109300 Sobic007G160600--Sobic006G109300 Sobic001G056200 Sobic001G056200 Sobic006G088100--Sobic001G056200 Sobic004G263900 Sobic004G263900 Sobic006G088100--Sobic004G263900 Sobic003G202800 Sobic003G202800 Sobic006G088100--Sobic003G202800 Sobic003G437500 Sobic003G437500 Sobic006G088100--Sobic003G437500 Sobic003G261300 Sobic003G261300 Sobic006G088100--Sobic003G261300 Sobic006G088100--Sobic006G209500 Sobic001G119300 Sobic001G119300 Sobic006G088100--Sobic001G119300 Sobic006G088100--Sobic002G350300 Sobic006G128800 Sobic006G128800 Sobic006G088100--Sobic006G128800 Sobic008G179700 Sobic008G179700 Sobic002G350300--Sobic008G179700 Sobic009G205200 Sobic009G205200 Sobic002G350300--Sobic009G205200 Sobic009G179700 Sobic009G179700 Sobic002G350300--Sobic009G179700 Sobic002G350300--Sobic001G107500 Sobic001G512700 Sobic001G512700 Sobic002G350300--Sobic001G512700 Sobic007G132400 Sobic007G132400 Sobic002G350300--Sobic007G132400 Sobic010G028300 Sobic010G028300 Sobic002G350300--Sobic010G028300 Sobic002G350300--Sobic001G119300 Sobic002G350300--Sobic006G088100 Sobic003G345400--Sobic009G205200 Sobic003G345400--Sobic001G107500 Sobic003G345400--Sobic002G350300 Sobic004G121100 Sobic004G121100 Sobic003G345400--Sobic004G121100 Sobic009G034200 Sobic009G034200 Sobic003G345400--Sobic009G034200 Sobic006G228500 Sobic006G228500 Sobic003G345400--Sobic006G228500 Sobic003G345400--Sobic001G333200 Sobic003G345400--Sobic001G119300 Sobic003G345400--Sobic010G056200 Sobic007G145200 Sobic007G145200 Sobic003G220200--Sobic007G145200 Sobic002G157300 Sobic002G157300 Sobic003G220200--Sobic002G157300 Sobic003G220200--Sobic002G157000 Sobic003G220200--Sobic002G320500 Sobic007G137900 Sobic007G137900 Sobic003G220200--Sobic007G137900 Sobic001G251700 Sobic001G251700 Sobic003G220200--Sobic001G251700 Sobic007G011400 Sobic007G011400 Sobic003G220200--Sobic007G011400 Sobic004G349900 Sobic004G349900 Sobic003G220200--Sobic004G349900 Sobic003G220200--Sobic001G107500 Sobic007G037100--Sobic006G082600 Sobic001G222300 Sobic001G222300 Sobic007G037100--Sobic001G222300 Sobic008G116500 Sobic008G116500 Sobic007G037100--Sobic008G116500 Sobic002G001600 Sobic002G001600 Sobic007G037100--Sobic002G001600 Sobic010G124001 Sobic010G124001 Sobic007G037100--Sobic010G124001 Sobic007G211000 Sobic007G211000 Sobic007G037100--Sobic007G211000 Sobic007G078000 Sobic007G078000 Sobic007G037100--Sobic007G078000 Sobic001G162300 Sobic001G162300 Sobic007G037100--Sobic001G162300 Sobic002G283300 Sobic002G283300 Sobic007G037100--Sobic002G283300 Sobic006G082600--Sobic001G162300 Sobic007G178700 Sobic007G178700 Sobic006G082600--Sobic007G178700 Sobic006G082600--Sobic007G037100 Sobic006G082600--Sobic001G251700 Sobic004G196700 Sobic004G196700 Sobic006G082600--Sobic004G196700 Sobic009G134500 Sobic009G134500 Sobic006G082600--Sobic009G134500 Sobic006G082600--Sobic010G124001 Sobic009G127900 Sobic009G127900 Sobic006G082600--Sobic009G127900 Sobic006G082600--Sobic002G157000
Octagon: transcription factors


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