Gene annotation
Transcriptome id Sobic.006G082600.1
Synonym Sb06g016930, ATFBP7, FBP7
Functional annotation OsFBX133 - F-box domain containing protein, expressed
UniProt C5Y8N2
Pfam PF12937
Panther DB PTHR12874
NCBI CDD KOG2997; F-box protein FBX9
KEGG Orthology K10295; F-box protein 9
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G21760 : F-box protein 7
RAP-DB (Rice) LOC_Os04g35190.1 : OsFBX133 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a056072
Brachypodium KQJ82652
Barley -
Wheat TraesCS2B02G320100 , TraesCS2B02G320100 , TraesCS2B02G320100 , TraesCS2D02G302000 , TraesCS2D02G302000 , TraesCS2D02G302000 , TraesCS2A02G303500
Populus -


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cDNA sequences
Sobic.006G082600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G162300 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
2 Sobic.007G178700 - -
3 Sobic.007G037100 MYB family transcription factor, putative, expressed -
4 Sobic.001G251700 OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
5 Sobic.004G196700 expressed protein -
6 Sobic.009G134500 WD domain, G-beta repeat domain containing protein, expressed K11801: DDB1- and CUL4-associated factor 11
7 Sobic.010G124001 - -
8 Sobic.009G127900 - -
9 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
10 Sobic.003G268300 surp module family protein, putative, expressed -
11 Sobic.007G137900 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
12 Sobic.005G144400 - -
13 Sobic.001G446900 arginyl-tRNA synthetase, putative, expressed -
14 Sobic.007G078000 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
15 Sobic.002G001600 MBTB12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
16 Sobic.007G037900 oxidoreductase family, NAD-binding Rossmann fold containing protein, expressed -
17 Sobic.001G067850 - -
18 Sobic.004G290800 GRAS family transcription factor(PubMedID : 23915383)@scarecrow, putative, expressed -
19 Sobic.002G243900 - -
20 Sobic.003G200200 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3


Gene co-expression network
sample Sobic006G082600 Sobic006G082600 Sobic001G162300 Sobic001G162300 Sobic006G082600--Sobic001G162300 Sobic007G178700 Sobic007G178700 Sobic006G082600--Sobic007G178700 Sobic007G037100 Sobic007G037100 Sobic006G082600--Sobic007G037100 Sobic001G251700 Sobic001G251700 Sobic006G082600--Sobic001G251700 Sobic004G196700 Sobic004G196700 Sobic006G082600--Sobic004G196700 Sobic009G134500 Sobic009G134500 Sobic006G082600--Sobic009G134500 Sobic010G124001 Sobic010G124001 Sobic006G082600--Sobic010G124001 Sobic009G127900 Sobic009G127900 Sobic006G082600--Sobic009G127900 Sobic002G157000 Sobic002G157000 Sobic006G082600--Sobic002G157000 Sobic001G162300--Sobic002G157000 Sobic006G246900 Sobic006G246900 Sobic001G162300--Sobic006G246900 Sobic003G268300 Sobic003G268300 Sobic001G162300--Sobic003G268300 Sobic001G162300--Sobic007G178700 Sobic001G162300--Sobic006G082600 Sobic007G011400 Sobic007G011400 Sobic001G162300--Sobic007G011400 Sobic001G094000 Sobic001G094000 Sobic001G162300--Sobic001G094000 Sobic003G170100 Sobic003G170100 Sobic001G162300--Sobic003G170100 Sobic001G477800 Sobic001G477800 Sobic001G162300--Sobic001G477800 Sobic007G178700--Sobic009G127900 Sobic007G178700--Sobic003G268300 Sobic002G243900 Sobic002G243900 Sobic007G178700--Sobic002G243900 Sobic003G087400 Sobic003G087400 Sobic007G178700--Sobic003G087400 Sobic004G007100 Sobic004G007100 Sobic007G178700--Sobic004G007100 Sobic007G178700--Sobic001G162300 Sobic001G446900 Sobic001G446900 Sobic007G178700--Sobic001G446900 Sobic005G144400 Sobic005G144400 Sobic007G178700--Sobic005G144400 Sobic001G420200 Sobic001G420200 Sobic007G178700--Sobic001G420200 Sobic007G037100--Sobic006G082600 Sobic001G222300 Sobic001G222300 Sobic007G037100--Sobic001G222300 Sobic008G116500 Sobic008G116500 Sobic007G037100--Sobic008G116500 Sobic002G001600 Sobic002G001600 Sobic007G037100--Sobic002G001600 Sobic007G037100--Sobic010G124001 Sobic007G211000 Sobic007G211000 Sobic007G037100--Sobic007G211000 Sobic007G078000 Sobic007G078000 Sobic007G037100--Sobic007G078000 Sobic007G037100--Sobic001G162300 Sobic002G283300 Sobic002G283300 Sobic007G037100--Sobic002G283300 Sobic007G137900 Sobic007G137900 Sobic001G251700--Sobic007G137900 Sobic003G200200 Sobic003G200200 Sobic001G251700--Sobic003G200200 Sobic002G157300 Sobic002G157300 Sobic001G251700--Sobic002G157300 Sobic001G251700--Sobic002G157000 Sobic001G251700--Sobic006G082600 Sobic002G248400 Sobic002G248400 Sobic001G251700--Sobic002G248400 Sobic002G320500 Sobic002G320500 Sobic001G251700--Sobic002G320500 Sobic001G251700--Sobic003G268300 Sobic003G220200 Sobic003G220200 Sobic001G251700--Sobic003G220200 Sobic007G185900 Sobic007G185900 Sobic004G196700--Sobic007G185900 Sobic004G196700--Sobic007G078000 Sobic005G149500 Sobic005G149500 Sobic004G196700--Sobic005G149500 Sobic004G196700--Sobic007G137900 Sobic004G196700--Sobic002G157300 Sobic003G187400 Sobic003G187400 Sobic004G196700--Sobic003G187400 Sobic004G196700--Sobic001G477800 Sobic004G196700--Sobic006G082600 Sobic009G040700 Sobic009G040700 Sobic004G196700--Sobic009G040700 Sobic009G134500--Sobic006G246900 Sobic009G134500--Sobic006G082600 Sobic009G134500--Sobic009G127900 Sobic009G134500--Sobic001G162300 Sobic009G134500--Sobic002G157000 Sobic008G041700 Sobic008G041700 Sobic009G134500--Sobic008G041700 Sobic005G187200 Sobic005G187200 Sobic009G134500--Sobic005G187200 Sobic007G037900 Sobic007G037900 Sobic009G134500--Sobic007G037900 Sobic009G134500--Sobic007G178700 Sobic010G124001--Sobic007G211000 Sobic002G203200 Sobic002G203200 Sobic010G124001--Sobic002G203200 Sobic006G088580 Sobic006G088580 Sobic010G124001--Sobic006G088580 Sobic004G112500 Sobic004G112500 Sobic010G124001--Sobic004G112500 Sobic010G124001--Sobic006G082600 Sobic001G271900 Sobic001G271900 Sobic010G124001--Sobic001G271900 Sobic001G543900 Sobic001G543900 Sobic010G124001--Sobic001G543900 Sobic010G124001--Sobic007G037900 Sobic010G124001--Sobic007G037100 Sobic009G127900--Sobic007G178700 Sobic009G127900--Sobic003G268300 Sobic009G127900--Sobic001G446900 Sobic006G066650 Sobic006G066650 Sobic009G127900--Sobic006G066650 Sobic004G290800 Sobic004G290800 Sobic009G127900--Sobic004G290800 Sobic010G026400 Sobic010G026400 Sobic009G127900--Sobic010G026400 Sobic009G127900--Sobic007G037900 Sobic008G173900 Sobic008G173900 Sobic009G127900--Sobic008G173900 Sobic001G111900 Sobic001G111900 Sobic009G127900--Sobic001G111900 Sobic002G157000--Sobic002G248400 Sobic002G157000--Sobic002G320500 Sobic002G157000--Sobic003G200200 Sobic002G157000--Sobic001G420200 Sobic002G157000--Sobic008G173900 Sobic002G157000--Sobic003G268300 Sobic002G157000--Sobic001G162300 Sobic003G108700 Sobic003G108700 Sobic002G157000--Sobic003G108700 Sobic002G157000--Sobic001G094000
Octagon: transcription factors


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