Gene annotation
Transcriptome id Sobic.001G446900.1
Synonym
Functional annotation arginyl-tRNA synthetase, putative, expressed
UniProt A0A1B6QPH8
Pfam -
Panther DB PTHR11956 PTHR11956:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006420; arginyl-tRNA aminoacylation GO:0005524ATP binding GO:0004814arginine-tRNA ligase activity


Orthologs (automatic annotation)
TAIR AT1G66530 : Arginyl-tRNA synthetase, class Ic
RAP-DB (Rice) LOC_Os05g07030.1 : arginyl-tRNA synthetase, putative, expressed
MaizeGDB (Corn) Zm00025a042930
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G178700 - -
2 Sobic.009G127900 - -
3 Sobic.006G082600 OsFBX133 - F-box domain containing protein, expressed K10295: F-box protein 9
4 Sobic.004G290800 GRAS family transcription factor(PubMedID : 23915383)@scarecrow, putative, expressed -
5 Sobic.003G268300 surp module family protein, putative, expressed -
6 Sobic.007G137900 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
7 Sobic.010G026400 BUD13, putative, expressed K13106: BUD13, pre-mRNA-splicing factor CWC26
8 Sobic.009G104201 - -
9 Sobic.001G111900 - -
10 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
11 Sobic.006G066650 - -
12 Sobic.003G087400 - -
13 Sobic.003G220200 protein kinase family protein, putative, expressed K17541: SCY1-like protein 2
14 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
15 Sobic.003G012500 expressed protein -
16 Sobic.007G096600 - -
17 Sobic.006G060100 glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
18 Sobic.001G420200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
19 Sobic.001G251700 OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
20 Sobic.004G007100 - -


Gene co-expression network
sample Sobic001G446900 Sobic001G446900 Sobic007G178700 Sobic007G178700 Sobic001G446900--Sobic007G178700 Sobic009G127900 Sobic009G127900 Sobic001G446900--Sobic009G127900 Sobic006G082600 Sobic006G082600 Sobic001G446900--Sobic006G082600 Sobic004G290800 Sobic004G290800 Sobic001G446900--Sobic004G290800 Sobic003G268300 Sobic003G268300 Sobic001G446900--Sobic003G268300 Sobic007G137900 Sobic007G137900 Sobic001G446900--Sobic007G137900 Sobic010G026400 Sobic010G026400 Sobic001G446900--Sobic010G026400 Sobic009G104201 Sobic009G104201 Sobic001G446900--Sobic009G104201 Sobic001G111900 Sobic001G111900 Sobic001G446900--Sobic001G111900 Sobic007G178700--Sobic009G127900 Sobic007G178700--Sobic003G268300 Sobic002G243900 Sobic002G243900 Sobic007G178700--Sobic002G243900 Sobic003G087400 Sobic003G087400 Sobic007G178700--Sobic003G087400 Sobic004G007100 Sobic004G007100 Sobic007G178700--Sobic004G007100 Sobic001G162300 Sobic001G162300 Sobic007G178700--Sobic001G162300 Sobic007G178700--Sobic001G446900 Sobic005G144400 Sobic005G144400 Sobic007G178700--Sobic005G144400 Sobic001G420200 Sobic001G420200 Sobic007G178700--Sobic001G420200 Sobic009G127900--Sobic007G178700 Sobic009G127900--Sobic003G268300 Sobic009G127900--Sobic001G446900 Sobic006G066650 Sobic006G066650 Sobic009G127900--Sobic006G066650 Sobic009G127900--Sobic004G290800 Sobic009G127900--Sobic010G026400 Sobic007G037900 Sobic007G037900 Sobic009G127900--Sobic007G037900 Sobic008G173900 Sobic008G173900 Sobic009G127900--Sobic008G173900 Sobic009G127900--Sobic001G111900 Sobic006G082600--Sobic001G162300 Sobic006G082600--Sobic007G178700 Sobic007G037100 Sobic007G037100 Sobic006G082600--Sobic007G037100 Sobic001G251700 Sobic001G251700 Sobic006G082600--Sobic001G251700 Sobic004G196700 Sobic004G196700 Sobic006G082600--Sobic004G196700 Sobic009G134500 Sobic009G134500 Sobic006G082600--Sobic009G134500 Sobic010G124001 Sobic010G124001 Sobic006G082600--Sobic010G124001 Sobic006G082600--Sobic009G127900 Sobic002G157000 Sobic002G157000 Sobic006G082600--Sobic002G157000 Sobic004G290800--Sobic009G127900 Sobic004G290800--Sobic001G420200 Sobic004G290800--Sobic007G178700 Sobic004G290800--Sobic007G037900 Sobic004G290800--Sobic003G268300 Sobic004G290800--Sobic001G162300 Sobic004G290800--Sobic002G157000 Sobic004G290800--Sobic001G111900 Sobic004G290800--Sobic001G446900 Sobic007G096600 Sobic007G096600 Sobic003G268300--Sobic007G096600 Sobic003G268300--Sobic002G157000 Sobic003G268300--Sobic001G420200 Sobic003G200200 Sobic003G200200 Sobic003G268300--Sobic003G200200 Sobic002G248400 Sobic002G248400 Sobic003G268300--Sobic002G248400 Sobic003G268300--Sobic009G127900 Sobic003G268300--Sobic007G178700 Sobic003G268300--Sobic007G037900 Sobic003G268300--Sobic008G173900 Sobic007G137900--Sobic001G251700 Sobic002G157300 Sobic002G157300 Sobic007G137900--Sobic002G157300 Sobic007G137900--Sobic004G196700 Sobic007G137900--Sobic003G200200 Sobic003G170100 Sobic003G170100 Sobic007G137900--Sobic003G170100 Sobic004G349900 Sobic004G349900 Sobic007G137900--Sobic004G349900 Sobic005G149500 Sobic005G149500 Sobic007G137900--Sobic005G149500 Sobic007G011400 Sobic007G011400 Sobic007G137900--Sobic007G011400 Sobic007G137900--Sobic002G157000 Sobic003G012500 Sobic003G012500 Sobic010G026400--Sobic003G012500 Sobic010G026400--Sobic002G157300 Sobic010G026400--Sobic009G127900 Sobic006G009400 Sobic006G009400 Sobic010G026400--Sobic006G009400 Sobic010G026400--Sobic007G011400 Sobic003G261300 Sobic003G261300 Sobic010G026400--Sobic003G261300 Sobic010G263800 Sobic010G263800 Sobic010G026400--Sobic010G263800 Sobic010G026400--Sobic005G149500 Sobic003G187400 Sobic003G187400 Sobic010G026400--Sobic003G187400 Sobic009G104201--Sobic004G007100 Sobic009G104201--Sobic003G087400 Sobic008G084700 Sobic008G084700 Sobic009G104201--Sobic008G084700 Sobic002G006900 Sobic002G006900 Sobic009G104201--Sobic002G006900 Sobic003G372700 Sobic003G372700 Sobic009G104201--Sobic003G372700 Sobic009G104201--Sobic007G096600 Sobic009G104201--Sobic002G243900 Sobic009G104201--Sobic007G178700 Sobic009G104201--Sobic003G268300 Sobic010G056000 Sobic010G056000 Sobic001G111900--Sobic010G056000 Sobic009G161600 Sobic009G161600 Sobic001G111900--Sobic009G161600 Sobic001G111900--Sobic009G127900 Sobic001G454401 Sobic001G454401 Sobic001G111900--Sobic001G454401 Sobic001G111900--Sobic007G178700 Sobic005G077466 Sobic005G077466 Sobic001G111900--Sobic005G077466 Sobic006G262200 Sobic006G262200 Sobic001G111900--Sobic006G262200 Sobic003G084900 Sobic003G084900 Sobic001G111900--Sobic003G084900 Sobic001G111900--Sobic006G009400
Octagon: transcription factors


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