Gene annotation
Transcriptome id Sobic.003G012500.1
Synonym Sb03g001270
Functional annotation expressed protein
UniProt C5XKB6
Pfam PF15375
Panther DB PTHR28096
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G44820 : -
RAP-DB (Rice) LOC_Os01g12480.1 : expressed protein
MaizeGDB (Corn) Zm00025a055266 , Zm00025a017778 , Zm00025a032993
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G026400 BUD13, putative, expressed K13106: BUD13, pre-mRNA-splicing factor CWC26
2 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
3 Sobic.003G187400 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
4 Sobic.010G260500 pre-mRNA-splicing factor syf2, putative, expressed K12868: pre-mRNA-splicing factor SYF2
5 Sobic.003G261300 arginine/serine-rich coiled-coil protein 1, putative, expressed -
6 Sobic.005G149500 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
7 Sobic.001G446900 arginyl-tRNA synthetase, putative, expressed -
8 Sobic.003G220200 protein kinase family protein, putative, expressed K17541: SCY1-like protein 2
9 Sobic.006G173100 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
10 Sobic.010G056000 GAGA-binding protein, putative, expressed -
11 Sobic.008G067600 protein kinase PKN/PRK1, effector, putative, expressed -
12 Sobic.009G040700 "OsPPKL2(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659919)@serine/threonine protein phosphatase, putative, expressed K01090: protein phosphatase
13 Sobic.001G111900 - -
14 Sobic.009G127900 - -
15 Sobic.009G056800 growth inhibition and differentiation-related protein 88, putative, expressed -
16 Sobic.001G251700 OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
17 Sobic.008G054500 WD domain, G-beta repeat domain containing protein, expressed -
18 Sobic.007G185900 IBR domain containing protein, putative, expressed K11968: ariadne-1
19 Sobic.007G132400 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
20 Sobic.004G196700 expressed protein -


Gene co-expression network
sample Sobic003G012500 Sobic003G012500 Sobic010G026400 Sobic010G026400 Sobic003G012500--Sobic010G026400 Sobic002G157300 Sobic002G157300 Sobic003G012500--Sobic002G157300 Sobic003G187400 Sobic003G187400 Sobic003G012500--Sobic003G187400 Sobic010G260500 Sobic010G260500 Sobic003G012500--Sobic010G260500 Sobic003G261300 Sobic003G261300 Sobic003G012500--Sobic003G261300 Sobic005G149500 Sobic005G149500 Sobic003G012500--Sobic005G149500 Sobic001G446900 Sobic001G446900 Sobic003G012500--Sobic001G446900 Sobic003G220200 Sobic003G220200 Sobic003G012500--Sobic003G220200 Sobic006G173100 Sobic006G173100 Sobic003G012500--Sobic006G173100 Sobic010G026400--Sobic003G012500 Sobic010G026400--Sobic002G157300 Sobic009G127900 Sobic009G127900 Sobic010G026400--Sobic009G127900 Sobic006G009400 Sobic006G009400 Sobic010G026400--Sobic006G009400 Sobic007G011400 Sobic007G011400 Sobic010G026400--Sobic007G011400 Sobic010G026400--Sobic003G261300 Sobic010G263800 Sobic010G263800 Sobic010G026400--Sobic010G263800 Sobic010G026400--Sobic005G149500 Sobic010G026400--Sobic003G187400 Sobic002G157300--Sobic010G026400 Sobic002G157300--Sobic003G187400 Sobic002G157300--Sobic007G011400 Sobic002G157300--Sobic005G149500 Sobic001G094000 Sobic001G094000 Sobic002G157300--Sobic001G094000 Sobic002G157300--Sobic010G260500 Sobic007G185900 Sobic007G185900 Sobic002G157300--Sobic007G185900 Sobic002G157300--Sobic010G263800 Sobic002G157300--Sobic006G173100 Sobic003G187400--Sobic002G157300 Sobic003G187400--Sobic005G149500 Sobic009G040700 Sobic009G040700 Sobic003G187400--Sobic009G040700 Sobic003G187400--Sobic001G094000 Sobic003G187400--Sobic006G173100 Sobic006G060100 Sobic006G060100 Sobic003G187400--Sobic006G060100 Sobic003G401000 Sobic003G401000 Sobic003G187400--Sobic003G401000 Sobic004G196700 Sobic004G196700 Sobic003G187400--Sobic004G196700 Sobic007G104800 Sobic007G104800 Sobic003G187400--Sobic007G104800 Sobic010G260500--Sobic002G157300 Sobic008G174300 Sobic008G174300 Sobic010G260500--Sobic008G174300 Sobic007G078000 Sobic007G078000 Sobic010G260500--Sobic007G078000 Sobic010G260500--Sobic007G185900 Sobic010G033400 Sobic010G033400 Sobic010G260500--Sobic010G033400 Sobic001G451000 Sobic001G451000 Sobic010G260500--Sobic001G451000 Sobic004G263900 Sobic004G263900 Sobic010G260500--Sobic004G263900 Sobic010G260500--Sobic005G149500 Sobic010G260500--Sobic003G187400 Sobic003G261300--Sobic010G026400 Sobic003G261300--Sobic002G157300 Sobic002G365100 Sobic002G365100 Sobic003G261300--Sobic002G365100 Sobic006G128800 Sobic006G128800 Sobic003G261300--Sobic006G128800 Sobic003G261300--Sobic003G220200 Sobic003G261300--Sobic003G012500 Sobic007G205800 Sobic007G205800 Sobic003G261300--Sobic007G205800 Sobic004G349900 Sobic004G349900 Sobic003G261300--Sobic004G349900 Sobic006G088100 Sobic006G088100 Sobic003G261300--Sobic006G088100 Sobic005G149500--Sobic003G187400 Sobic005G149500--Sobic002G157300 Sobic005G149500--Sobic009G040700 Sobic005G149500--Sobic004G196700 Sobic005G149500--Sobic007G011400 Sobic005G149500--Sobic006G060100 Sobic005G149500--Sobic007G185900 Sobic007G137900 Sobic007G137900 Sobic005G149500--Sobic007G137900 Sobic005G149500--Sobic007G078000 Sobic007G178700 Sobic007G178700 Sobic001G446900--Sobic007G178700 Sobic001G446900--Sobic009G127900 Sobic006G082600 Sobic006G082600 Sobic001G446900--Sobic006G082600 Sobic004G290800 Sobic004G290800 Sobic001G446900--Sobic004G290800 Sobic003G268300 Sobic003G268300 Sobic001G446900--Sobic003G268300 Sobic001G446900--Sobic007G137900 Sobic001G446900--Sobic010G026400 Sobic009G104201 Sobic009G104201 Sobic001G446900--Sobic009G104201 Sobic001G111900 Sobic001G111900 Sobic001G446900--Sobic001G111900 Sobic007G145200 Sobic007G145200 Sobic003G220200--Sobic007G145200 Sobic003G220200--Sobic002G157300 Sobic002G157000 Sobic002G157000 Sobic003G220200--Sobic002G157000 Sobic002G320500 Sobic002G320500 Sobic003G220200--Sobic002G320500 Sobic003G220200--Sobic007G137900 Sobic001G251700 Sobic001G251700 Sobic003G220200--Sobic001G251700 Sobic003G220200--Sobic007G011400 Sobic003G220200--Sobic004G349900 Sobic001G107500 Sobic001G107500 Sobic003G220200--Sobic001G107500 Sobic001G090400 Sobic001G090400 Sobic006G173100--Sobic001G090400 Sobic006G173100--Sobic002G157300 Sobic006G173100--Sobic003G187400 Sobic002G197100 Sobic002G197100 Sobic006G173100--Sobic002G197100 Sobic004G021100 Sobic004G021100 Sobic006G173100--Sobic004G021100 Sobic006G032400 Sobic006G032400 Sobic006G173100--Sobic006G032400 Sobic001G512700 Sobic001G512700 Sobic006G173100--Sobic001G512700 Sobic004G067700 Sobic004G067700 Sobic006G173100--Sobic004G067700 Sobic002G370900 Sobic002G370900 Sobic006G173100--Sobic002G370900
Octagon: transcription factors


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