Gene annotation
Transcriptome id Sobic.010G026400.1
Synonym Sb10g002430
Functional annotation BUD13, putative, expressed
UniProt A0A194YGX6
Pfam PF09736
Panther DB PTHR31809
NCBI CDD KOG2654; Uncharacterized conserved protein
KEGG Orthology K13106; BUD13, pre-mRNA-splicing factor CWC26
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G31870 : -
RAP-DB (Rice) LOC_Os08g08080.1 : BUD13, putative, expressed
MaizeGDB (Corn) Zm00025a053129
Brachypodium KQK19964
Barley HORVU7Hr1G073780.4 , HORVU7Hr1G073780.1 , HORVU7Hr1G073780.2 , HORVU7Hr1G073780.3
Wheat TraesCS4A02G372400 , TraesCS7D02G070100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G012500 expressed protein -
2 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
3 Sobic.009G127900 - -
4 Sobic.006G009400 G-patch domain containing protein, expressed -
5 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
6 Sobic.003G261300 arginine/serine-rich coiled-coil protein 1, putative, expressed -
7 Sobic.010G263800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein(PubMedID : 28640841)@UPF0183 protein, putative, expressed -
8 Sobic.005G149500 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
9 Sobic.003G187400 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
10 Sobic.009G040700 "OsPPKL2(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659919)@serine/threonine protein phosphatase, putative, expressed K01090: protein phosphatase
11 Sobic.004G196700 expressed protein -
12 Sobic.009G087800 seven in absentia protein family domain containing protein, expressed K08742: E3 ubiquitin-protein ligase SIAH2
13 Sobic.001G251700 OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
14 Sobic.007G178700 - -
15 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
16 Sobic.010G260500 pre-mRNA-splicing factor syf2, putative, expressed K12868: pre-mRNA-splicing factor SYF2
17 Sobic.007G137900 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
18 Sobic.003G268300 surp module family protein, putative, expressed -
19 Sobic.001G420200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
20 Sobic.001G477800 expressed protein -


Gene co-expression network
sample Sobic010G026400 Sobic010G026400 Sobic003G012500 Sobic003G012500 Sobic010G026400--Sobic003G012500 Sobic002G157300 Sobic002G157300 Sobic010G026400--Sobic002G157300 Sobic009G127900 Sobic009G127900 Sobic010G026400--Sobic009G127900 Sobic006G009400 Sobic006G009400 Sobic010G026400--Sobic006G009400 Sobic007G011400 Sobic007G011400 Sobic010G026400--Sobic007G011400 Sobic003G261300 Sobic003G261300 Sobic010G026400--Sobic003G261300 Sobic010G263800 Sobic010G263800 Sobic010G026400--Sobic010G263800 Sobic005G149500 Sobic005G149500 Sobic010G026400--Sobic005G149500 Sobic003G187400 Sobic003G187400 Sobic010G026400--Sobic003G187400 Sobic003G012500--Sobic010G026400 Sobic003G012500--Sobic002G157300 Sobic003G012500--Sobic003G187400 Sobic010G260500 Sobic010G260500 Sobic003G012500--Sobic010G260500 Sobic003G012500--Sobic003G261300 Sobic003G012500--Sobic005G149500 Sobic001G446900 Sobic001G446900 Sobic003G012500--Sobic001G446900 Sobic003G220200 Sobic003G220200 Sobic003G012500--Sobic003G220200 Sobic006G173100 Sobic006G173100 Sobic003G012500--Sobic006G173100 Sobic002G157300--Sobic010G026400 Sobic002G157300--Sobic003G187400 Sobic002G157300--Sobic007G011400 Sobic002G157300--Sobic005G149500 Sobic001G094000 Sobic001G094000 Sobic002G157300--Sobic001G094000 Sobic002G157300--Sobic010G260500 Sobic007G185900 Sobic007G185900 Sobic002G157300--Sobic007G185900 Sobic002G157300--Sobic010G263800 Sobic002G157300--Sobic006G173100 Sobic007G178700 Sobic007G178700 Sobic009G127900--Sobic007G178700 Sobic003G268300 Sobic003G268300 Sobic009G127900--Sobic003G268300 Sobic009G127900--Sobic001G446900 Sobic006G066650 Sobic006G066650 Sobic009G127900--Sobic006G066650 Sobic004G290800 Sobic004G290800 Sobic009G127900--Sobic004G290800 Sobic009G127900--Sobic010G026400 Sobic007G037900 Sobic007G037900 Sobic009G127900--Sobic007G037900 Sobic008G173900 Sobic008G173900 Sobic009G127900--Sobic008G173900 Sobic001G111900 Sobic001G111900 Sobic009G127900--Sobic001G111900 Sobic006G009400--Sobic010G263800 Sobic005G055150 Sobic005G055150 Sobic006G009400--Sobic005G055150 Sobic002G313300 Sobic002G313300 Sobic006G009400--Sobic002G313300 Sobic001G543900 Sobic001G543900 Sobic006G009400--Sobic001G543900 Sobic005G110427 Sobic005G110427 Sobic006G009400--Sobic005G110427 Sobic001G477800 Sobic001G477800 Sobic006G009400--Sobic001G477800 Sobic007G073400 Sobic007G073400 Sobic006G009400--Sobic007G073400 Sobic006G009400--Sobic007G178700 Sobic006G262200 Sobic006G262200 Sobic006G009400--Sobic006G262200 Sobic007G011400--Sobic001G094000 Sobic007G205800 Sobic007G205800 Sobic007G011400--Sobic007G205800 Sobic007G011400--Sobic002G157300 Sobic007G011400--Sobic010G263800 Sobic007G011400--Sobic002G313300 Sobic009G040700 Sobic009G040700 Sobic007G011400--Sobic009G040700 Sobic002G157000 Sobic002G157000 Sobic007G011400--Sobic002G157000 Sobic001G162300 Sobic001G162300 Sobic007G011400--Sobic001G162300 Sobic008G034600 Sobic008G034600 Sobic007G011400--Sobic008G034600 Sobic003G261300--Sobic010G026400 Sobic003G261300--Sobic002G157300 Sobic002G365100 Sobic002G365100 Sobic003G261300--Sobic002G365100 Sobic006G128800 Sobic006G128800 Sobic003G261300--Sobic006G128800 Sobic003G261300--Sobic003G220200 Sobic003G261300--Sobic003G012500 Sobic003G261300--Sobic007G205800 Sobic004G349900 Sobic004G349900 Sobic003G261300--Sobic004G349900 Sobic006G088100 Sobic006G088100 Sobic003G261300--Sobic006G088100 Sobic010G263800--Sobic006G009400 Sobic010G263800--Sobic007G011400 Sobic002G077200 Sobic002G077200 Sobic010G263800--Sobic002G077200 Sobic010G263800--Sobic002G313300 Sobic010G263800--Sobic002G157300 Sobic010G263800--Sobic007G205800 Sobic009G117400 Sobic009G117400 Sobic010G263800--Sobic009G117400 Sobic001G347600 Sobic001G347600 Sobic010G263800--Sobic001G347600 Sobic010G263800--Sobic008G034600 Sobic005G149500--Sobic003G187400 Sobic005G149500--Sobic002G157300 Sobic005G149500--Sobic009G040700 Sobic004G196700 Sobic004G196700 Sobic005G149500--Sobic004G196700 Sobic005G149500--Sobic007G011400 Sobic006G060100 Sobic006G060100 Sobic005G149500--Sobic006G060100 Sobic005G149500--Sobic007G185900 Sobic007G137900 Sobic007G137900 Sobic005G149500--Sobic007G137900 Sobic007G078000 Sobic007G078000 Sobic005G149500--Sobic007G078000 Sobic003G187400--Sobic002G157300 Sobic003G187400--Sobic005G149500 Sobic003G187400--Sobic009G040700 Sobic003G187400--Sobic001G094000 Sobic003G187400--Sobic006G173100 Sobic003G187400--Sobic006G060100 Sobic003G401000 Sobic003G401000 Sobic003G187400--Sobic003G401000 Sobic003G187400--Sobic004G196700 Sobic007G104800 Sobic007G104800 Sobic003G187400--Sobic007G104800
Octagon: transcription factors


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