Gene annotation
Transcriptome id Sobic.001G477800.1
Synonym Sb01g044750
Functional annotation expressed protein
UniProt C5WUV8
Pfam PF07303
Panther DB PTHR38372
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G21290 : dentin sialophosphoprotein-related
RAP-DB (Rice) LOC_Os03g08820.1 : expressed protein
MaizeGDB (Corn) Zm00025a001000 , Zm00025a053237 , Zm00025a056198
Brachypodium KQK23225
Barley HORVU4Hr1G078030.4 , HORVU4Hr1G078030.5 , HORVU4Hr1G078030.6 , HORVU4Hr1G078030.1 , HORVU4Hr1G078030.2 , HORVU4Hr1G078030.3
Wheat TraesCS4B02G303000 , TraesCS4A02G002100 , TraesCS4D02G301500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G313300 bromodomain domain containing protein, expressed -
2 Sobic.004G031700 expressed protein -
3 Sobic.001G094000 expressed protein -
4 Sobic.001G544200 endonuclease, putative, expressed K10848: ERCC4, DNA excision repair protein ERCC-4
5 Sobic.001G543900 H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
6 Sobic.006G080300 SET domain containing protein, expressed -
7 Sobic.009G040700 "OsPPKL2(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659919)@serine/threonine protein phosphatase, putative, expressed K01090: protein phosphatase
8 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
9 Sobic.006G009400 G-patch domain containing protein, expressed -
10 Sobic.004G196700 expressed protein -
11 Sobic.006G128900 cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like
12 Sobic.001G162300 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
13 Sobic.001G464200 flap endonuclease, putative, expressed K10846: ERCC5, XPG, DNA excision repair protein ERCC-5
14 Sobic.003G268300 surp module family protein, putative, expressed -
15 Sobic.008G078100 EDM2, putative, expressed -
16 Sobic.010G263800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein(PubMedID : 28640841)@UPF0183 protein, putative, expressed -
17 Sobic.005G149500 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
18 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
19 Sobic.007G185900 IBR domain containing protein, putative, expressed K11968: ariadne-1
20 Sobic.006G246900 expressed protein -


Gene co-expression network
sample Sobic001G477800 Sobic001G477800 Sobic002G313300 Sobic002G313300 Sobic001G477800--Sobic002G313300 Sobic004G031700 Sobic004G031700 Sobic001G477800--Sobic004G031700 Sobic001G094000 Sobic001G094000 Sobic001G477800--Sobic001G094000 Sobic001G544200 Sobic001G544200 Sobic001G477800--Sobic001G544200 Sobic001G543900 Sobic001G543900 Sobic001G477800--Sobic001G543900 Sobic006G080300 Sobic006G080300 Sobic001G477800--Sobic006G080300 Sobic009G040700 Sobic009G040700 Sobic001G477800--Sobic009G040700 Sobic007G011400 Sobic007G011400 Sobic001G477800--Sobic007G011400 Sobic006G009400 Sobic006G009400 Sobic001G477800--Sobic006G009400 Sobic002G313300--Sobic001G477800 Sobic002G077200 Sobic002G077200 Sobic002G313300--Sobic002G077200 Sobic002G313300--Sobic007G011400 Sobic010G263800 Sobic010G263800 Sobic002G313300--Sobic010G263800 Sobic002G313300--Sobic001G543900 Sobic002G313300--Sobic006G080300 Sobic002G313300--Sobic006G009400 Sobic007G185900 Sobic007G185900 Sobic002G313300--Sobic007G185900 Sobic002G313300--Sobic004G031700 Sobic009G000500 Sobic009G000500 Sobic004G031700--Sobic009G000500 Sobic003G445400 Sobic003G445400 Sobic004G031700--Sobic003G445400 Sobic004G031700--Sobic001G544200 Sobic004G031700--Sobic001G477800 Sobic004G031700--Sobic006G080300 Sobic006G128900 Sobic006G128900 Sobic004G031700--Sobic006G128900 Sobic004G031700--Sobic001G094000 Sobic001G511500 Sobic001G511500 Sobic004G031700--Sobic001G511500 Sobic002G158700 Sobic002G158700 Sobic004G031700--Sobic002G158700 Sobic001G094000--Sobic007G011400 Sobic001G094000--Sobic009G040700 Sobic001G094000--Sobic001G477800 Sobic002G157000 Sobic002G157000 Sobic001G094000--Sobic002G157000 Sobic003G268300 Sobic003G268300 Sobic001G094000--Sobic003G268300 Sobic002G157300 Sobic002G157300 Sobic001G094000--Sobic002G157300 Sobic003G187400 Sobic003G187400 Sobic001G094000--Sobic003G187400 Sobic001G094000--Sobic004G031700 Sobic001G094000--Sobic006G080300 Sobic001G544200--Sobic004G031700 Sobic001G544200--Sobic001G477800 Sobic001G464200 Sobic001G464200 Sobic001G544200--Sobic001G464200 Sobic001G544200--Sobic009G040700 Sobic001G544200--Sobic001G511500 Sobic001G544200--Sobic006G128900 Sobic008G078100 Sobic008G078100 Sobic001G544200--Sobic008G078100 Sobic008G054500 Sobic008G054500 Sobic001G544200--Sobic008G054500 Sobic001G544200--Sobic001G094000 Sobic001G543900--Sobic001G477800 Sobic001G543900--Sobic002G313300 Sobic004G112500 Sobic004G112500 Sobic001G543900--Sobic004G112500 Sobic002G001600 Sobic002G001600 Sobic001G543900--Sobic002G001600 Sobic001G543900--Sobic006G009400 Sobic002G166700 Sobic002G166700 Sobic001G543900--Sobic002G166700 Sobic005G130200 Sobic005G130200 Sobic001G543900--Sobic005G130200 Sobic001G272000 Sobic001G272000 Sobic001G543900--Sobic001G272000 Sobic010G248200 Sobic010G248200 Sobic001G543900--Sobic010G248200 Sobic006G080300--Sobic003G268300 Sobic006G080300--Sobic004G031700 Sobic006G080300--Sobic001G094000 Sobic006G080300--Sobic001G477800 Sobic006G080300--Sobic002G313300 Sobic001G206100 Sobic001G206100 Sobic006G080300--Sobic001G206100 Sobic006G080300--Sobic002G157000 Sobic003G170100 Sobic003G170100 Sobic006G080300--Sobic003G170100 Sobic001G257300 Sobic001G257300 Sobic006G080300--Sobic001G257300 Sobic009G040700--Sobic001G094000 Sobic009G040700--Sobic003G187400 Sobic005G149500 Sobic005G149500 Sobic009G040700--Sobic005G149500 Sobic009G040700--Sobic007G011400 Sobic009G040700--Sobic002G157300 Sobic009G040700--Sobic001G477800 Sobic006G145000 Sobic006G145000 Sobic009G040700--Sobic006G145000 Sobic004G196700 Sobic004G196700 Sobic009G040700--Sobic004G196700 Sobic009G040700--Sobic008G078100 Sobic007G011400--Sobic001G094000 Sobic007G205800 Sobic007G205800 Sobic007G011400--Sobic007G205800 Sobic007G011400--Sobic002G157300 Sobic007G011400--Sobic010G263800 Sobic007G011400--Sobic002G313300 Sobic007G011400--Sobic009G040700 Sobic007G011400--Sobic002G157000 Sobic001G162300 Sobic001G162300 Sobic007G011400--Sobic001G162300 Sobic008G034600 Sobic008G034600 Sobic007G011400--Sobic008G034600 Sobic006G009400--Sobic010G263800 Sobic005G055150 Sobic005G055150 Sobic006G009400--Sobic005G055150 Sobic006G009400--Sobic002G313300 Sobic006G009400--Sobic001G543900 Sobic005G110427 Sobic005G110427 Sobic006G009400--Sobic005G110427 Sobic006G009400--Sobic001G477800 Sobic007G073400 Sobic007G073400 Sobic006G009400--Sobic007G073400 Sobic007G178700 Sobic007G178700 Sobic006G009400--Sobic007G178700 Sobic006G262200 Sobic006G262200 Sobic006G009400--Sobic006G262200
Octagon: transcription factors


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