Gene annotation
Transcriptome id Sobic.006G080300.1
Synonym ASHH1, Sb06g016720, SDG26
Functional annotation SET domain containing protein, expressed
UniProt C5YGH0
Pfam PF00856
Panther DB PTHR22884 PTHR22884:SF359
NCBI CDD KOG4442; Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G76710 : SET domain group 26
RAP-DB (Rice) LOC_Os04g34976.2 : SET domain containing protein, expressed
MaizeGDB (Corn) Zm00025a011403
Brachypodium KQJ82631 , KQJ82630
Barley HORVU2Hr1G074910.14 , HORVU2Hr1G074910.11 , HORVU2Hr1G074910.10 , HORVU2Hr1G074910.13 , HORVU2Hr1G074910.12 , HORVU2Hr1G074910.1 , HORVU2Hr1G074910.3 , HORVU2Hr1G074910.2 , HORVU2Hr1G074910.5 , HORVU2Hr1G074910.4 , HORVU2Hr1G074910.7 , HORVU2Hr1G074910.6 , HORVU2Hr1G074910.9 , HORVU2Hr1G074910.8
Wheat TraesCS2A02G302100 , TraesCS2D02G300800 , TraesCS2B02G317900 , TraesCS2B02G317900 , TraesCS2B02G317900
Populus PNT37550 , PNT37548


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G268300 surp module family protein, putative, expressed -
2 Sobic.004G031700 expressed protein -
3 Sobic.001G094000 expressed protein -
4 Sobic.001G477800 expressed protein -
5 Sobic.002G313300 bromodomain domain containing protein, expressed -
6 Sobic.001G206100 expressed protein -
7 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
8 Sobic.003G170100 - -
9 Sobic.001G257300 OsFBL52 - F-box domain and LRR containing protein, expressed -
10 Sobic.006G013500 hydrolase/ zinc ion binding protein, putative, expressed K15442: TAD3, tRNA-specific adenosine deaminase 3
11 Sobic.008G173900 "OsPPKL3(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659913)@serine/threonine-protein phosphatase BSL2, putative, expressed -
12 Sobic.007G185900 IBR domain containing protein, putative, expressed K11968: ariadne-1
13 Sobic.007G137900 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
14 Sobic.002G248400 ENT domain containing protein, expressed -
15 Sobic.009G000500 pex14, putative, expressed K13343: peroxin-14
16 Sobic.009G104300 - -
17 Sobic.004G213000 AT hook motif family protein, expressed -
18 Sobic.008G054500 WD domain, G-beta repeat domain containing protein, expressed -
19 Sobic.008G116500 plus-3 domain containing protein, expressed K15178: RNA polymerase-associated protein RTF1
20 Sobic.001G162300 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2


Gene co-expression network
sample Sobic006G080300 Sobic006G080300 Sobic003G268300 Sobic003G268300 Sobic006G080300--Sobic003G268300 Sobic004G031700 Sobic004G031700 Sobic006G080300--Sobic004G031700 Sobic001G094000 Sobic001G094000 Sobic006G080300--Sobic001G094000 Sobic001G477800 Sobic001G477800 Sobic006G080300--Sobic001G477800 Sobic002G313300 Sobic002G313300 Sobic006G080300--Sobic002G313300 Sobic001G206100 Sobic001G206100 Sobic006G080300--Sobic001G206100 Sobic002G157000 Sobic002G157000 Sobic006G080300--Sobic002G157000 Sobic003G170100 Sobic003G170100 Sobic006G080300--Sobic003G170100 Sobic001G257300 Sobic001G257300 Sobic006G080300--Sobic001G257300 Sobic007G096600 Sobic007G096600 Sobic003G268300--Sobic007G096600 Sobic003G268300--Sobic002G157000 Sobic001G420200 Sobic001G420200 Sobic003G268300--Sobic001G420200 Sobic003G200200 Sobic003G200200 Sobic003G268300--Sobic003G200200 Sobic002G248400 Sobic002G248400 Sobic003G268300--Sobic002G248400 Sobic009G127900 Sobic009G127900 Sobic003G268300--Sobic009G127900 Sobic007G178700 Sobic007G178700 Sobic003G268300--Sobic007G178700 Sobic007G037900 Sobic007G037900 Sobic003G268300--Sobic007G037900 Sobic008G173900 Sobic008G173900 Sobic003G268300--Sobic008G173900 Sobic009G000500 Sobic009G000500 Sobic004G031700--Sobic009G000500 Sobic003G445400 Sobic003G445400 Sobic004G031700--Sobic003G445400 Sobic001G544200 Sobic001G544200 Sobic004G031700--Sobic001G544200 Sobic004G031700--Sobic001G477800 Sobic004G031700--Sobic006G080300 Sobic006G128900 Sobic006G128900 Sobic004G031700--Sobic006G128900 Sobic004G031700--Sobic001G094000 Sobic001G511500 Sobic001G511500 Sobic004G031700--Sobic001G511500 Sobic002G158700 Sobic002G158700 Sobic004G031700--Sobic002G158700 Sobic007G011400 Sobic007G011400 Sobic001G094000--Sobic007G011400 Sobic009G040700 Sobic009G040700 Sobic001G094000--Sobic009G040700 Sobic001G094000--Sobic001G477800 Sobic001G094000--Sobic002G157000 Sobic001G094000--Sobic003G268300 Sobic002G157300 Sobic002G157300 Sobic001G094000--Sobic002G157300 Sobic003G187400 Sobic003G187400 Sobic001G094000--Sobic003G187400 Sobic001G094000--Sobic004G031700 Sobic001G094000--Sobic006G080300 Sobic001G477800--Sobic002G313300 Sobic001G477800--Sobic004G031700 Sobic001G477800--Sobic001G094000 Sobic001G477800--Sobic001G544200 Sobic001G543900 Sobic001G543900 Sobic001G477800--Sobic001G543900 Sobic001G477800--Sobic006G080300 Sobic001G477800--Sobic009G040700 Sobic001G477800--Sobic007G011400 Sobic006G009400 Sobic006G009400 Sobic001G477800--Sobic006G009400 Sobic002G313300--Sobic001G477800 Sobic002G077200 Sobic002G077200 Sobic002G313300--Sobic002G077200 Sobic002G313300--Sobic007G011400 Sobic010G263800 Sobic010G263800 Sobic002G313300--Sobic010G263800 Sobic002G313300--Sobic001G543900 Sobic002G313300--Sobic006G080300 Sobic002G313300--Sobic006G009400 Sobic007G185900 Sobic007G185900 Sobic002G313300--Sobic007G185900 Sobic002G313300--Sobic004G031700 Sobic001G206100--Sobic001G257300 Sobic006G013500 Sobic006G013500 Sobic001G206100--Sobic006G013500 Sobic002G320500 Sobic002G320500 Sobic001G206100--Sobic002G320500 Sobic001G206100--Sobic006G080300 Sobic001G206100--Sobic002G157000 Sobic001G206100--Sobic009G000500 Sobic004G213000 Sobic004G213000 Sobic001G206100--Sobic004G213000 Sobic001G356500 Sobic001G356500 Sobic001G206100--Sobic001G356500 Sobic002G161000 Sobic002G161000 Sobic001G206100--Sobic002G161000 Sobic002G157000--Sobic002G248400 Sobic002G157000--Sobic002G320500 Sobic002G157000--Sobic003G200200 Sobic002G157000--Sobic001G420200 Sobic002G157000--Sobic008G173900 Sobic002G157000--Sobic003G268300 Sobic001G162300 Sobic001G162300 Sobic002G157000--Sobic001G162300 Sobic003G108700 Sobic003G108700 Sobic002G157000--Sobic003G108700 Sobic002G157000--Sobic001G094000 Sobic005G110472 Sobic005G110472 Sobic003G170100--Sobic005G110472 Sobic003G170100--Sobic003G268300 Sobic003G170100--Sobic003G200200 Sobic003G170100--Sobic007G096600 Sobic002G144933 Sobic002G144933 Sobic003G170100--Sobic002G144933 Sobic003G170100--Sobic002G157000 Sobic001G152320 Sobic001G152320 Sobic003G170100--Sobic001G152320 Sobic007G137900 Sobic007G137900 Sobic003G170100--Sobic007G137900 Sobic003G170100--Sobic001G162300 Sobic001G257300--Sobic001G206100 Sobic001G257300--Sobic006G013500 Sobic001G257300--Sobic003G170100 Sobic001G257300--Sobic006G080300 Sobic001G257300--Sobic003G200200 Sobic002G001600 Sobic002G001600 Sobic001G257300--Sobic002G001600 Sobic001G257300--Sobic004G213000 Sobic001G257300--Sobic002G161000 Sobic001G257300--Sobic001G162300
Octagon: transcription factors


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