Gene annotation
Transcriptome id Sobic.003G220200.1,Sobic.003G220200.2
Synonym Sb03g027880
Functional annotation protein kinase family protein, putative, expressed
UniProt C5XR14
Pfam PF00069
Panther DB PTHR12984 PTHR12984:SF6
NCBI CDD KOG2137; Protein kinase
KEGG Orthology K17541; SCY1-like protein 2
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G71410 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os01g42950.1 : protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a037515 , Zm00025a028735 , Zm00025a038508
Brachypodium KQK08728
Barley HORVU3Hr1G054200.8 , HORVU3Hr1G054200.9 , HORVU3Hr1G054200.6 , HORVU3Hr1G054200.7 , HORVU3Hr1G054200.4 , HORVU3Hr1G054200.5 , HORVU3Hr1G054200.2 , HORVU3Hr1G054200.3 , HORVU3Hr1G054200.1 , HORVU3Hr1G054200.10 , HORVU3Hr1G048750.1 , HORVU3Hr1G048750.3 , HORVU3Hr1G048750.2 , HORVU3Hr1G054200.11
Wheat TraesCS3B02G251500 , TraesCS3B02G251500 , TraesCS3B02G251500 , TraesCS3D02G231400 , TraesCS3D02G231400 , TraesCS3D02G231400 , TraesCS3D02G231400 , TraesCS3A02G221700 , TraesCS3A02G221700 , TraesCS3A02G221700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G145200 serine esterase family protein, putative, expressed -
2 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
3 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
4 Sobic.002G320500 MYB family transcription factor, putative, expressed -
5 Sobic.007G137900 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
6 Sobic.001G251700 OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
7 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
8 Sobic.004G349900 -(PubMedID : 27329702)@expressed protein -
9 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
10 Sobic.003G261300 arginine/serine-rich coiled-coil protein 1, putative, expressed -
11 Sobic.007G132400 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
12 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
13 Sobic.003G200200 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
14 Sobic.003G397800 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
15 Sobic.003G197800 peptidyl-prolyl cis-trans isomerase, putative, expressed K12737: peptidyl-prolyl cis-trans isomerase SDCCAG10
16 Sobic.010G026400 BUD13, putative, expressed K13106: BUD13, pre-mRNA-splicing factor CWC26
17 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
18 Sobic.002G248400 ENT domain containing protein, expressed -
19 Sobic.001G206100 expressed protein -
20 Sobic.001G162300 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2


Gene co-expression network
sample Sobic003G220200 Sobic003G220200 Sobic007G145200 Sobic007G145200 Sobic003G220200--Sobic007G145200 Sobic002G157300 Sobic002G157300 Sobic003G220200--Sobic002G157300 Sobic002G157000 Sobic002G157000 Sobic003G220200--Sobic002G157000 Sobic002G320500 Sobic002G320500 Sobic003G220200--Sobic002G320500 Sobic007G137900 Sobic007G137900 Sobic003G220200--Sobic007G137900 Sobic001G251700 Sobic001G251700 Sobic003G220200--Sobic001G251700 Sobic007G011400 Sobic007G011400 Sobic003G220200--Sobic007G011400 Sobic004G349900 Sobic004G349900 Sobic003G220200--Sobic004G349900 Sobic001G107500 Sobic001G107500 Sobic003G220200--Sobic001G107500 Sobic007G145200--Sobic003G220200 Sobic010G026400 Sobic010G026400 Sobic007G145200--Sobic010G026400 Sobic006G082600 Sobic006G082600 Sobic007G145200--Sobic006G082600 Sobic001G451000 Sobic001G451000 Sobic007G145200--Sobic001G451000 Sobic009G127900 Sobic009G127900 Sobic007G145200--Sobic009G127900 Sobic001G446900 Sobic001G446900 Sobic007G145200--Sobic001G446900 Sobic007G145200--Sobic002G157300 Sobic004G290800 Sobic004G290800 Sobic007G145200--Sobic004G290800 Sobic001G486300 Sobic001G486300 Sobic007G145200--Sobic001G486300 Sobic002G157300--Sobic010G026400 Sobic003G187400 Sobic003G187400 Sobic002G157300--Sobic003G187400 Sobic002G157300--Sobic007G011400 Sobic005G149500 Sobic005G149500 Sobic002G157300--Sobic005G149500 Sobic001G094000 Sobic001G094000 Sobic002G157300--Sobic001G094000 Sobic010G260500 Sobic010G260500 Sobic002G157300--Sobic010G260500 Sobic007G185900 Sobic007G185900 Sobic002G157300--Sobic007G185900 Sobic010G263800 Sobic010G263800 Sobic002G157300--Sobic010G263800 Sobic006G173100 Sobic006G173100 Sobic002G157300--Sobic006G173100 Sobic002G248400 Sobic002G248400 Sobic002G157000--Sobic002G248400 Sobic002G157000--Sobic002G320500 Sobic003G200200 Sobic003G200200 Sobic002G157000--Sobic003G200200 Sobic001G420200 Sobic001G420200 Sobic002G157000--Sobic001G420200 Sobic008G173900 Sobic008G173900 Sobic002G157000--Sobic008G173900 Sobic003G268300 Sobic003G268300 Sobic002G157000--Sobic003G268300 Sobic001G162300 Sobic001G162300 Sobic002G157000--Sobic001G162300 Sobic003G108700 Sobic003G108700 Sobic002G157000--Sobic003G108700 Sobic002G157000--Sobic001G094000 Sobic002G320500--Sobic002G157000 Sobic002G320500--Sobic002G248400 Sobic009G065100 Sobic009G065100 Sobic002G320500--Sobic009G065100 Sobic009G210500 Sobic009G210500 Sobic002G320500--Sobic009G210500 Sobic006G133800 Sobic006G133800 Sobic002G320500--Sobic006G133800 Sobic002G320500--Sobic001G107500 Sobic006G032400 Sobic006G032400 Sobic002G320500--Sobic006G032400 Sobic009G000500 Sobic009G000500 Sobic002G320500--Sobic009G000500 Sobic001G090400 Sobic001G090400 Sobic002G320500--Sobic001G090400 Sobic007G137900--Sobic001G251700 Sobic007G137900--Sobic002G157300 Sobic004G196700 Sobic004G196700 Sobic007G137900--Sobic004G196700 Sobic007G137900--Sobic003G200200 Sobic003G170100 Sobic003G170100 Sobic007G137900--Sobic003G170100 Sobic007G137900--Sobic004G349900 Sobic007G137900--Sobic005G149500 Sobic007G137900--Sobic007G011400 Sobic007G137900--Sobic002G157000 Sobic001G251700--Sobic007G137900 Sobic001G251700--Sobic003G200200 Sobic001G251700--Sobic002G157300 Sobic001G251700--Sobic002G157000 Sobic001G251700--Sobic006G082600 Sobic001G251700--Sobic002G248400 Sobic001G251700--Sobic002G320500 Sobic001G251700--Sobic003G268300 Sobic001G251700--Sobic003G220200 Sobic007G011400--Sobic001G094000 Sobic007G205800 Sobic007G205800 Sobic007G011400--Sobic007G205800 Sobic007G011400--Sobic002G157300 Sobic007G011400--Sobic010G263800 Sobic002G313300 Sobic002G313300 Sobic007G011400--Sobic002G313300 Sobic009G040700 Sobic009G040700 Sobic007G011400--Sobic009G040700 Sobic007G011400--Sobic002G157000 Sobic007G011400--Sobic001G162300 Sobic008G034600 Sobic008G034600 Sobic007G011400--Sobic008G034600 Sobic004G349900--Sobic007G137900 Sobic004G349900--Sobic002G157300 Sobic006G128800 Sobic006G128800 Sobic004G349900--Sobic006G128800 Sobic001G206100 Sobic001G206100 Sobic004G349900--Sobic001G206100 Sobic004G349900--Sobic003G220200 Sobic004G349900--Sobic007G011400 Sobic003G261300 Sobic003G261300 Sobic004G349900--Sobic003G261300 Sobic008G116500 Sobic008G116500 Sobic004G349900--Sobic008G116500 Sobic004G349900--Sobic007G185900 Sobic001G107500--Sobic002G320500 Sobic001G107500--Sobic006G133800 Sobic001G107500--Sobic002G157000 Sobic001G107500--Sobic009G065100 Sobic001G107500--Sobic001G090400 Sobic010G056200 Sobic010G056200 Sobic001G107500--Sobic010G056200 Sobic001G497300 Sobic001G497300 Sobic001G107500--Sobic001G497300 Sobic007G104800 Sobic007G104800 Sobic001G107500--Sobic007G104800 Sobic004G205600 Sobic004G205600 Sobic001G107500--Sobic004G205600
Octagon: transcription factors


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