Gene annotation
Transcriptome id Sobic.002G320500.1
Synonym Sb02g034880
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5XA31
Pfam PF00249
Panther DB PTHR21717 PTHR21717:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G09710 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os02g34630.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a031587 , Zm00025a020620
Brachypodium KQJ99828
Barley HORVU6Hr1G083320.1 , HORVU6Hr1G083320.2 , HORVU6Hr1G083320.3
Wheat TraesCS7D02G259400 , TraesCS7A02G258600 , TraesCS6B02G378200 , TraesCS6D02G327900 , TraesCS6A02G345400 , TraesCS7A02G258600
Populus -


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cDNA sequences
Sobic.002G320500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
2 Sobic.002G248400 ENT domain containing protein, expressed -
3 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
4 Sobic.009G210500 expressed protein -
5 Sobic.006G133800 myb-like DNA-binding domain containing protein, expressed -
6 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
7 Sobic.006G032400 expressed protein -
8 Sobic.009G000500 pex14, putative, expressed K13343: peroxin-14
9 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
10 Sobic.008G173900 "OsPPKL3(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659913)@serine/threonine-protein phosphatase BSL2, putative, expressed -
11 Sobic.001G206100 expressed protein -
12 Sobic.003G197800 peptidyl-prolyl cis-trans isomerase, putative, expressed K12737: peptidyl-prolyl cis-trans isomerase SDCCAG10
13 Sobic.005G021500 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
14 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
15 Sobic.002G151600 R-interacting factor 1, putative, expressed -
16 Sobic.003G200200 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
17 Sobic.001G251700 OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
18 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
19 Sobic.001G420200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
20 Sobic.003G220200 protein kinase family protein, putative, expressed K17541: SCY1-like protein 2


Gene co-expression network
sample Sobic002G320500 Sobic002G320500 Sobic002G157000 Sobic002G157000 Sobic002G320500--Sobic002G157000 Sobic002G248400 Sobic002G248400 Sobic002G320500--Sobic002G248400 Sobic009G065100 Sobic009G065100 Sobic002G320500--Sobic009G065100 Sobic009G210500 Sobic009G210500 Sobic002G320500--Sobic009G210500 Sobic006G133800 Sobic006G133800 Sobic002G320500--Sobic006G133800 Sobic001G107500 Sobic001G107500 Sobic002G320500--Sobic001G107500 Sobic006G032400 Sobic006G032400 Sobic002G320500--Sobic006G032400 Sobic009G000500 Sobic009G000500 Sobic002G320500--Sobic009G000500 Sobic001G090400 Sobic001G090400 Sobic002G320500--Sobic001G090400 Sobic002G157000--Sobic002G248400 Sobic002G157000--Sobic002G320500 Sobic003G200200 Sobic003G200200 Sobic002G157000--Sobic003G200200 Sobic001G420200 Sobic001G420200 Sobic002G157000--Sobic001G420200 Sobic008G173900 Sobic008G173900 Sobic002G157000--Sobic008G173900 Sobic003G268300 Sobic003G268300 Sobic002G157000--Sobic003G268300 Sobic001G162300 Sobic001G162300 Sobic002G157000--Sobic001G162300 Sobic003G108700 Sobic003G108700 Sobic002G157000--Sobic003G108700 Sobic001G094000 Sobic001G094000 Sobic002G157000--Sobic001G094000 Sobic002G248400--Sobic002G157000 Sobic002G248400--Sobic003G108700 Sobic002G248400--Sobic003G268300 Sobic002G248400--Sobic001G420200 Sobic002G248400--Sobic002G320500 Sobic002G248400--Sobic003G200200 Sobic002G248400--Sobic006G032400 Sobic002G248400--Sobic001G090400 Sobic004G257400 Sobic004G257400 Sobic002G248400--Sobic004G257400 Sobic009G065100--Sobic002G320500 Sobic009G065100--Sobic002G157000 Sobic009G065100--Sobic008G173900 Sobic009G215800 Sobic009G215800 Sobic009G065100--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic009G065100--Sobic004G084300 Sobic002G144933 Sobic002G144933 Sobic009G065100--Sobic002G144933 Sobic002G309800 Sobic002G309800 Sobic009G065100--Sobic002G309800 Sobic009G065100--Sobic001G107500 Sobic003G197800 Sobic003G197800 Sobic009G065100--Sobic003G197800 Sobic009G210500--Sobic002G320500 Sobic007G065400 Sobic007G065400 Sobic009G210500--Sobic007G065400 Sobic009G210500--Sobic002G157000 Sobic009G210500--Sobic006G032400 Sobic009G210500--Sobic003G268300 Sobic001G407200 Sobic001G407200 Sobic009G210500--Sobic001G407200 Sobic007G167500 Sobic007G167500 Sobic009G210500--Sobic007G167500 Sobic009G210500--Sobic001G090400 Sobic004G145500 Sobic004G145500 Sobic009G210500--Sobic004G145500 Sobic006G133800--Sobic002G320500 Sobic006G133800--Sobic002G157000 Sobic006G133800--Sobic009G000500 Sobic006G133800--Sobic001G107500 Sobic006G133800--Sobic002G248400 Sobic006G133800--Sobic003G197800 Sobic006G133800--Sobic008G173900 Sobic006G133800--Sobic009G210500 Sobic006G133800--Sobic009G065100 Sobic001G107500--Sobic002G320500 Sobic001G107500--Sobic006G133800 Sobic001G107500--Sobic002G157000 Sobic001G107500--Sobic009G065100 Sobic001G107500--Sobic001G090400 Sobic010G056200 Sobic010G056200 Sobic001G107500--Sobic010G056200 Sobic001G497300 Sobic001G497300 Sobic001G107500--Sobic001G497300 Sobic007G104800 Sobic007G104800 Sobic001G107500--Sobic007G104800 Sobic004G205600 Sobic004G205600 Sobic001G107500--Sobic004G205600 Sobic006G032400--Sobic002G320500 Sobic006G032400--Sobic002G248400 Sobic005G015900 Sobic005G015900 Sobic006G032400--Sobic005G015900 Sobic003G241200 Sobic003G241200 Sobic006G032400--Sobic003G241200 Sobic006G032400--Sobic009G210500 Sobic006G032400--Sobic001G090400 Sobic006G173100 Sobic006G173100 Sobic006G032400--Sobic006G173100 Sobic004G271000 Sobic004G271000 Sobic006G032400--Sobic004G271000 Sobic006G032400--Sobic001G094000 Sobic004G031700 Sobic004G031700 Sobic009G000500--Sobic004G031700 Sobic003G445400 Sobic003G445400 Sobic009G000500--Sobic003G445400 Sobic009G000500--Sobic002G320500 Sobic006G128900 Sobic006G128900 Sobic009G000500--Sobic006G128900 Sobic009G000500--Sobic006G133800 Sobic009G000500--Sobic001G090400 Sobic003G307000 Sobic003G307000 Sobic009G000500--Sobic003G307000 Sobic009G000500--Sobic008G173900 Sobic001G206100 Sobic001G206100 Sobic009G000500--Sobic001G206100 Sobic008G067600 Sobic008G067600 Sobic001G090400--Sobic008G067600 Sobic001G090400--Sobic006G173100 Sobic004G057400 Sobic004G057400 Sobic001G090400--Sobic004G057400 Sobic001G176200 Sobic001G176200 Sobic001G090400--Sobic001G176200 Sobic001G090400--Sobic002G320500 Sobic001G090400--Sobic009G000500 Sobic002G157300 Sobic002G157300 Sobic001G090400--Sobic002G157300 Sobic001G090400--Sobic004G205600 Sobic001G090400--Sobic002G248400
Octagon: transcription factors


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