Gene annotation
Transcriptome id Sobic.005G021500.1
Synonym Sb05g001810
Functional annotation protein of unknown function, DUF618 domain containing protein, expressed
UniProt C5Y3Z1
Pfam PF04818
Panther DB PTHR12460
NCBI CDD KOG2669; Regulator of nuclear mRNA
KEGG Orthology K15559; regulator of Ty1 transposition protein 103
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G65180 : ENTH/VHS family protein
RAP-DB (Rice) LOC_Os11g03570.1 : protein of unknown function, DUF618 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a013135 , Zm00025a028990 , Zm00025a053725 , Zm00025a033377
Brachypodium KQJ89527
Barley -
Wheat TraesCS4A02G188700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G320500 MYB family transcription factor, putative, expressed -
2 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
3 Sobic.003G394300 tetratricopeptide repeat domain containing protein, expressed -
4 Sobic.001G533700 STE_PAK_Ste20_STLK.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
5 Sobic.004G158200 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.004G039200 splicing factor 3B subunit 1, putative, expressed K12828: SF3B1, splicing factor 3B subunit 1
7 Sobic.009G000500 pex14, putative, expressed K13343: peroxin-14
8 Sobic.006G133800 myb-like DNA-binding domain containing protein, expressed -
9 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
10 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
11 Sobic.009G210500 expressed protein -
12 Sobic.008G067600 protein kinase PKN/PRK1, effector, putative, expressed -
13 Sobic.003G119000 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
14 Sobic.007G065400 expressed protein K14400: pre-mRNA cleavage complex 2 protein Pcf11
15 Sobic.005G079800 transcriptional corepressor SEUSS, putative, expressed -
16 Sobic.007G091600 proline rich protein 3, putative, expressed -
17 Sobic.003G108700 RNA recognition motif, putative, expressed -
18 Sobic.003G307000 RNA recognition motif containing protein, expressed K18667: activating signal cointegrator complex subunit 2
19 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
20 Sobic.002G248400 ENT domain containing protein, expressed -


Gene co-expression network
sample Sobic005G021500 Sobic005G021500 Sobic002G320500 Sobic002G320500 Sobic005G021500--Sobic002G320500 Sobic009G065100 Sobic009G065100 Sobic005G021500--Sobic009G065100 Sobic003G394300 Sobic003G394300 Sobic005G021500--Sobic003G394300 Sobic001G533700 Sobic001G533700 Sobic005G021500--Sobic001G533700 Sobic004G158200 Sobic004G158200 Sobic005G021500--Sobic004G158200 Sobic004G039200 Sobic004G039200 Sobic005G021500--Sobic004G039200 Sobic009G000500 Sobic009G000500 Sobic005G021500--Sobic009G000500 Sobic006G133800 Sobic006G133800 Sobic005G021500--Sobic006G133800 Sobic001G090400 Sobic001G090400 Sobic005G021500--Sobic001G090400 Sobic002G157000 Sobic002G157000 Sobic002G320500--Sobic002G157000 Sobic002G248400 Sobic002G248400 Sobic002G320500--Sobic002G248400 Sobic002G320500--Sobic009G065100 Sobic009G210500 Sobic009G210500 Sobic002G320500--Sobic009G210500 Sobic002G320500--Sobic006G133800 Sobic001G107500 Sobic001G107500 Sobic002G320500--Sobic001G107500 Sobic006G032400 Sobic006G032400 Sobic002G320500--Sobic006G032400 Sobic002G320500--Sobic009G000500 Sobic002G320500--Sobic001G090400 Sobic009G065100--Sobic002G320500 Sobic009G065100--Sobic002G157000 Sobic008G173900 Sobic008G173900 Sobic009G065100--Sobic008G173900 Sobic009G215800 Sobic009G215800 Sobic009G065100--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic009G065100--Sobic004G084300 Sobic002G144933 Sobic002G144933 Sobic009G065100--Sobic002G144933 Sobic002G309800 Sobic002G309800 Sobic009G065100--Sobic002G309800 Sobic009G065100--Sobic001G107500 Sobic003G197800 Sobic003G197800 Sobic009G065100--Sobic003G197800 Sobic003G445400 Sobic003G445400 Sobic003G394300--Sobic003G445400 Sobic003G394300--Sobic004G084300 Sobic003G307000 Sobic003G307000 Sobic003G394300--Sobic003G307000 Sobic004G088200 Sobic004G088200 Sobic003G394300--Sobic004G088200 Sobic003G394300--Sobic005G021500 Sobic008G067600 Sobic008G067600 Sobic003G394300--Sobic008G067600 Sobic003G394300--Sobic004G158200 Sobic003G394300--Sobic009G000500 Sobic007G078600 Sobic007G078600 Sobic003G394300--Sobic007G078600 Sobic001G533700--Sobic004G158200 Sobic001G533700--Sobic005G021500 Sobic001G205200 Sobic001G205200 Sobic001G533700--Sobic001G205200 Sobic007G167500 Sobic007G167500 Sobic001G533700--Sobic007G167500 Sobic002G006900 Sobic002G006900 Sobic001G533700--Sobic002G006900 Sobic001G533700--Sobic008G173900 Sobic006G048500 Sobic006G048500 Sobic001G533700--Sobic006G048500 Sobic001G533700--Sobic009G065100 Sobic001G533700--Sobic009G210500 Sobic004G158200--Sobic004G084300 Sobic004G158200--Sobic001G533700 Sobic001G311500 Sobic001G311500 Sobic004G158200--Sobic001G311500 Sobic004G158200--Sobic009G065100 Sobic004G158200--Sobic003G394300 Sobic007G065400 Sobic007G065400 Sobic004G158200--Sobic007G065400 Sobic004G158200--Sobic005G021500 Sobic004G158200--Sobic008G067600 Sobic004G158200--Sobic002G006900 Sobic009G024000 Sobic009G024000 Sobic004G039200--Sobic009G024000 Sobic003G101500 Sobic003G101500 Sobic004G039200--Sobic003G101500 Sobic007G161000 Sobic007G161000 Sobic004G039200--Sobic007G161000 Sobic004G039200--Sobic007G065400 Sobic008G113100 Sobic008G113100 Sobic004G039200--Sobic008G113100 Sobic008G028700 Sobic008G028700 Sobic004G039200--Sobic008G028700 Sobic008G009700 Sobic008G009700 Sobic004G039200--Sobic008G009700 Sobic007G117400 Sobic007G117400 Sobic004G039200--Sobic007G117400 Sobic007G054400 Sobic007G054400 Sobic004G039200--Sobic007G054400 Sobic004G031700 Sobic004G031700 Sobic009G000500--Sobic004G031700 Sobic009G000500--Sobic003G445400 Sobic009G000500--Sobic002G320500 Sobic006G128900 Sobic006G128900 Sobic009G000500--Sobic006G128900 Sobic009G000500--Sobic006G133800 Sobic009G000500--Sobic001G090400 Sobic009G000500--Sobic003G307000 Sobic009G000500--Sobic008G173900 Sobic001G206100 Sobic001G206100 Sobic009G000500--Sobic001G206100 Sobic006G133800--Sobic002G320500 Sobic006G133800--Sobic002G157000 Sobic006G133800--Sobic009G000500 Sobic006G133800--Sobic001G107500 Sobic006G133800--Sobic002G248400 Sobic006G133800--Sobic003G197800 Sobic006G133800--Sobic008G173900 Sobic006G133800--Sobic009G210500 Sobic006G133800--Sobic009G065100 Sobic001G090400--Sobic008G067600 Sobic006G173100 Sobic006G173100 Sobic001G090400--Sobic006G173100 Sobic004G057400 Sobic004G057400 Sobic001G090400--Sobic004G057400 Sobic001G176200 Sobic001G176200 Sobic001G090400--Sobic001G176200 Sobic001G090400--Sobic002G320500 Sobic001G090400--Sobic009G000500 Sobic002G157300 Sobic002G157300 Sobic001G090400--Sobic002G157300 Sobic004G205600 Sobic004G205600 Sobic001G090400--Sobic004G205600 Sobic001G090400--Sobic002G248400
Octagon: transcription factors


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