Gene annotation
Transcriptome id Sobic.001G533700.2,Sobic.001G533700.6,Sobic.001G533700.3,Sobic.001G533700.5,Sobic.001G533700.4,Sobic.001G533700.1
Synonym Sb01g049690
Functional annotation STE_PAK_Ste20_STLK.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
UniProt A0A1Z5SC16 , A0A1Z5SBU9 , A0A1Z5SBX7 , A0A1Z5SBU5 , A0A1B6QQZ8 , A0A1B6QR04
Pfam PF00069
Panther DB PTHR24361 PTHR24361:SF357
NCBI CDD KOG0582; Ste20-like serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G10730 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g02320.1 : STE_PAK_Ste20_STLK.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
MaizeGDB (Corn) Zm00025a000202 , Zm00025a017413 , Zm00025a006284
Brachypodium PNT67732 , PNT67731 , PNT67730 , KQJ97481 , KQK24030 , KQK24031
Barley HORVU4Hr1G088910.12 , HORVU4Hr1G088910.10 , HORVU4Hr1G088910.16 , HORVU4Hr1G088910.17 , HORVU4Hr1G088910.14 , HORVU4Hr1G088910.18 , HORVU4Hr1G088910.19 , HORVU4Hr1G088910.13 , HORVU4Hr1G088910.11 , HORVU4Hr1G088910.15 , HORVU4Hr1G088910.1 , HORVU4Hr1G088910.2 , HORVU4Hr1G088910.3 , HORVU4Hr1G088910.4 , HORVU4Hr1G088910.5 , HORVU4Hr1G088910.6 , HORVU4Hr1G088910.7 , HORVU4Hr1G088910.8 , HORVU4Hr1G088910.9
Wheat TraesCS1D02G185000 , TraesCS1D02G185000 , TraesCS1D02G185000 , TraesCS1D02G185000 , TraesCS5A02G556400 , TraesCS5A02G556400 , TraesCS5A02G556400 , TraesCS5A02G556400 , TraesCS5A02G556400 , TraesCS5A02G556400 , TraesCS5A02G556400 , TraesCS5A02G556400 , TraesCS4B02G398400 , TraesCS4B02G398400 , TraesCS4B02G398400 , TraesCS4B02G398400 , TraesCS4B02G398400 , TraesCS4B02G398400 , TraesCS4B02G395600 , TraesCS1A02G181900 , TraesCS1A02G181900 , TraesCS1D02G185000 , TraesCS7A02G078200 , TraesCS7A02G078200 , TraesCS1B02G199100 , TraesCS1B02G199100 , TraesCSU02G115300 , TraesCSU02G115300 , TraesCSU02G115300 , TraesCSU02G115300 , TraesCSU02G115300
Populus -


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cDNA sequences
Sobic.001G533700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G158200 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.005G021500 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
3 Sobic.001G205200 expressed protein -
4 Sobic.007G167500 expressed protein -
5 Sobic.002G006900 tetratricopeptide repeat domain containing protein, expressed -
6 Sobic.008G173900 "OsPPKL3(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659913)@serine/threonine-protein phosphatase BSL2, putative, expressed -
7 Sobic.006G048500 - -
8 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
9 Sobic.009G210500 expressed protein -
10 Sobic.008G067600 protein kinase PKN/PRK1, effector, putative, expressed -
11 Sobic.004G007100 - -
12 Sobic.003G119000 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
13 Sobic.001G420200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
14 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
15 Sobic.002G380500 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12891: splicing factor, arginine/serine-rich 2
16 Sobic.005G023900 expressed protein -
17 Sobic.005G159000 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed -
18 Sobic.002G133400 CTR1-like protein kinase, putative, expressed K14510: serine/threonine-protein kinase CTR1
19 Sobic.002G320500 MYB family transcription factor, putative, expressed -
20 Sobic.007G065400 expressed protein K14400: pre-mRNA cleavage complex 2 protein Pcf11


Gene co-expression network
sample Sobic001G533700 Sobic001G533700 Sobic004G158200 Sobic004G158200 Sobic001G533700--Sobic004G158200 Sobic005G021500 Sobic005G021500 Sobic001G533700--Sobic005G021500 Sobic001G205200 Sobic001G205200 Sobic001G533700--Sobic001G205200 Sobic007G167500 Sobic007G167500 Sobic001G533700--Sobic007G167500 Sobic002G006900 Sobic002G006900 Sobic001G533700--Sobic002G006900 Sobic008G173900 Sobic008G173900 Sobic001G533700--Sobic008G173900 Sobic006G048500 Sobic006G048500 Sobic001G533700--Sobic006G048500 Sobic009G065100 Sobic009G065100 Sobic001G533700--Sobic009G065100 Sobic009G210500 Sobic009G210500 Sobic001G533700--Sobic009G210500 Sobic004G084300 Sobic004G084300 Sobic004G158200--Sobic004G084300 Sobic004G158200--Sobic001G533700 Sobic001G311500 Sobic001G311500 Sobic004G158200--Sobic001G311500 Sobic004G158200--Sobic009G065100 Sobic003G394300 Sobic003G394300 Sobic004G158200--Sobic003G394300 Sobic007G065400 Sobic007G065400 Sobic004G158200--Sobic007G065400 Sobic004G158200--Sobic005G021500 Sobic008G067600 Sobic008G067600 Sobic004G158200--Sobic008G067600 Sobic004G158200--Sobic002G006900 Sobic002G320500 Sobic002G320500 Sobic005G021500--Sobic002G320500 Sobic005G021500--Sobic009G065100 Sobic005G021500--Sobic003G394300 Sobic005G021500--Sobic001G533700 Sobic005G021500--Sobic004G158200 Sobic004G039200 Sobic004G039200 Sobic005G021500--Sobic004G039200 Sobic009G000500 Sobic009G000500 Sobic005G021500--Sobic009G000500 Sobic006G133800 Sobic006G133800 Sobic005G021500--Sobic006G133800 Sobic001G090400 Sobic001G090400 Sobic005G021500--Sobic001G090400 Sobic001G205200--Sobic006G048500 Sobic001G205200--Sobic002G006900 Sobic003G372700 Sobic003G372700 Sobic001G205200--Sobic003G372700 Sobic002G297200 Sobic002G297200 Sobic001G205200--Sobic002G297200 Sobic004G007100 Sobic004G007100 Sobic001G205200--Sobic004G007100 Sobic002G309600 Sobic002G309600 Sobic001G205200--Sobic002G309600 Sobic003G087400 Sobic003G087400 Sobic001G205200--Sobic003G087400 Sobic001G205200--Sobic007G167500 Sobic003G029700 Sobic003G029700 Sobic001G205200--Sobic003G029700 Sobic003G119000 Sobic003G119000 Sobic007G167500--Sobic003G119000 Sobic007G167500--Sobic002G006900 Sobic003G397800 Sobic003G397800 Sobic007G167500--Sobic003G397800 Sobic007G096600 Sobic007G096600 Sobic007G167500--Sobic007G096600 Sobic010G101800 Sobic010G101800 Sobic007G167500--Sobic010G101800 Sobic007G167500--Sobic007G065400 Sobic007G167500--Sobic009G210500 Sobic003G332800 Sobic003G332800 Sobic007G167500--Sobic003G332800 Sobic007G167500--Sobic003G372700 Sobic008G047800 Sobic008G047800 Sobic002G006900--Sobic008G047800 Sobic002G006900--Sobic007G065400 Sobic003G200200 Sobic003G200200 Sobic002G006900--Sobic003G200200 Sobic002G006900--Sobic003G372700 Sobic009G040600 Sobic009G040600 Sobic002G006900--Sobic009G040600 Sobic001G155000 Sobic001G155000 Sobic002G006900--Sobic001G155000 Sobic002G006900--Sobic002G309600 Sobic001G214300 Sobic001G214300 Sobic002G006900--Sobic001G214300 Sobic001G512700 Sobic001G512700 Sobic002G006900--Sobic001G512700 Sobic002G157000 Sobic002G157000 Sobic008G173900--Sobic002G157000 Sobic002G144933 Sobic002G144933 Sobic008G173900--Sobic002G144933 Sobic001G420200 Sobic001G420200 Sobic008G173900--Sobic001G420200 Sobic003G268300 Sobic003G268300 Sobic008G173900--Sobic003G268300 Sobic008G054500 Sobic008G054500 Sobic008G173900--Sobic008G054500 Sobic008G173900--Sobic003G200200 Sobic001G274200 Sobic001G274200 Sobic008G173900--Sobic001G274200 Sobic001G413500 Sobic001G413500 Sobic008G173900--Sobic001G413500 Sobic008G173900--Sobic007G096600 Sobic006G048500--Sobic004G007100 Sobic005G144400 Sobic005G144400 Sobic006G048500--Sobic005G144400 Sobic002G145101 Sobic002G145101 Sobic006G048500--Sobic002G145101 Sobic003G148000 Sobic003G148000 Sobic006G048500--Sobic003G148000 Sobic003G429650 Sobic003G429650 Sobic006G048500--Sobic003G429650 Sobic002G243900 Sobic002G243900 Sobic006G048500--Sobic002G243900 Sobic006G048600 Sobic006G048600 Sobic006G048500--Sobic006G048600 Sobic006G048500--Sobic002G006900 Sobic006G182900 Sobic006G182900 Sobic006G048500--Sobic006G182900 Sobic009G065100--Sobic002G320500 Sobic009G065100--Sobic002G157000 Sobic009G065100--Sobic008G173900 Sobic009G215800 Sobic009G215800 Sobic009G065100--Sobic009G215800 Sobic009G065100--Sobic004G084300 Sobic009G065100--Sobic002G144933 Sobic002G309800 Sobic002G309800 Sobic009G065100--Sobic002G309800 Sobic001G107500 Sobic001G107500 Sobic009G065100--Sobic001G107500 Sobic003G197800 Sobic003G197800 Sobic009G065100--Sobic003G197800 Sobic009G210500--Sobic002G320500 Sobic009G210500--Sobic007G065400 Sobic009G210500--Sobic002G157000 Sobic006G032400 Sobic006G032400 Sobic009G210500--Sobic006G032400 Sobic009G210500--Sobic003G268300 Sobic001G407200 Sobic001G407200 Sobic009G210500--Sobic001G407200 Sobic009G210500--Sobic007G167500 Sobic009G210500--Sobic001G090400 Sobic004G145500 Sobic004G145500 Sobic009G210500--Sobic004G145500
Octagon: transcription factors


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