Gene annotation
Transcriptome id Sobic.005G023900.1
Synonym Sb05g001970
Functional annotation expressed protein
UniProt C5Y409
Pfam -
Panther DB PTHR35118 PTHR35118:SF2
NCBI CDD KOG1164; Casein kinase (serine/threonine/tyrosine protein kinase)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40980 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os02g29890.1 : expressed protein
MaizeGDB (Corn) Zm00025a013130 , Zm00025a033386
Brachypodium KQJ92433
Barley HORVU5Hr1G044990.5 , HORVU5Hr1G044990.4 , HORVU5Hr1G044990.1 , HORVU5Hr1G044990.3 , HORVU5Hr1G044990.2
Wheat TraesCS5D02G152800 , TraesCS5A02G139100 , TraesCS5B02G136700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
2 Sobic.003G200200 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
3 Sobic.001G413500 expressed protein -
4 Sobic.001G497300 protein kinase domain containing protein, expressed -
5 Sobic.002G006900 tetratricopeptide repeat domain containing protein, expressed -
6 Sobic.001G486300 phosphatidylinositol transfer, putative, expressed -
7 Sobic.003G268300 surp module family protein, putative, expressed -
8 Sobic.007G065400 expressed protein K14400: pre-mRNA cleavage complex 2 protein Pcf11
9 Sobic.009G210500 expressed protein -
10 Sobic.004G145500 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
11 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
12 Sobic.001G420200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
13 Sobic.002G248400 ENT domain containing protein, expressed -
14 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
15 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
16 Sobic.002G320500 MYB family transcription factor, putative, expressed -
17 Sobic.008G173900 "OsPPKL3(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659913)@serine/threonine-protein phosphatase BSL2, putative, expressed -
18 Sobic.004G240800 protein kinase domain containing protein, expressed -
19 Sobic.003G332800 GTPase-activating protein, putative, expressed -
20 Sobic.007G167500 expressed protein -


Gene co-expression network
sample Sobic005G023900 Sobic005G023900 Sobic002G157000 Sobic002G157000 Sobic005G023900--Sobic002G157000 Sobic003G200200 Sobic003G200200 Sobic005G023900--Sobic003G200200 Sobic001G413500 Sobic001G413500 Sobic005G023900--Sobic001G413500 Sobic001G497300 Sobic001G497300 Sobic005G023900--Sobic001G497300 Sobic002G006900 Sobic002G006900 Sobic005G023900--Sobic002G006900 Sobic001G486300 Sobic001G486300 Sobic005G023900--Sobic001G486300 Sobic003G268300 Sobic003G268300 Sobic005G023900--Sobic003G268300 Sobic007G065400 Sobic007G065400 Sobic005G023900--Sobic007G065400 Sobic009G210500 Sobic009G210500 Sobic005G023900--Sobic009G210500 Sobic002G248400 Sobic002G248400 Sobic002G157000--Sobic002G248400 Sobic002G320500 Sobic002G320500 Sobic002G157000--Sobic002G320500 Sobic002G157000--Sobic003G200200 Sobic001G420200 Sobic001G420200 Sobic002G157000--Sobic001G420200 Sobic008G173900 Sobic008G173900 Sobic002G157000--Sobic008G173900 Sobic002G157000--Sobic003G268300 Sobic001G162300 Sobic001G162300 Sobic002G157000--Sobic001G162300 Sobic003G108700 Sobic003G108700 Sobic002G157000--Sobic003G108700 Sobic001G094000 Sobic001G094000 Sobic002G157000--Sobic001G094000 Sobic003G200200--Sobic002G157000 Sobic003G200200--Sobic002G006900 Sobic003G200200--Sobic003G268300 Sobic001G251700 Sobic001G251700 Sobic003G200200--Sobic001G251700 Sobic007G096600 Sobic007G096600 Sobic003G200200--Sobic007G096600 Sobic003G200200--Sobic002G248400 Sobic001G155000 Sobic001G155000 Sobic003G200200--Sobic001G155000 Sobic003G200200--Sobic008G173900 Sobic003G170100 Sobic003G170100 Sobic003G200200--Sobic003G170100 Sobic009G083900 Sobic009G083900 Sobic001G413500--Sobic009G083900 Sobic001G413500--Sobic008G173900 Sobic001G413500--Sobic002G157000 Sobic004G240800 Sobic004G240800 Sobic001G413500--Sobic004G240800 Sobic001G413500--Sobic001G497300 Sobic001G413500--Sobic005G023900 Sobic001G413500--Sobic003G200200 Sobic004G145500 Sobic004G145500 Sobic001G413500--Sobic004G145500 Sobic001G413500--Sobic003G268300 Sobic007G104800 Sobic007G104800 Sobic001G497300--Sobic007G104800 Sobic001G512700 Sobic001G512700 Sobic001G497300--Sobic001G512700 Sobic001G497300--Sobic002G006900 Sobic006G237400 Sobic006G237400 Sobic001G497300--Sobic006G237400 Sobic004G205600 Sobic004G205600 Sobic001G497300--Sobic004G205600 Sobic001G497300--Sobic001G413500 Sobic008G047800 Sobic008G047800 Sobic001G497300--Sobic008G047800 Sobic001G497300--Sobic005G023900 Sobic001G497300--Sobic002G157000 Sobic002G006900--Sobic008G047800 Sobic002G006900--Sobic007G065400 Sobic002G006900--Sobic003G200200 Sobic003G372700 Sobic003G372700 Sobic002G006900--Sobic003G372700 Sobic009G040600 Sobic009G040600 Sobic002G006900--Sobic009G040600 Sobic002G006900--Sobic001G155000 Sobic002G309600 Sobic002G309600 Sobic002G006900--Sobic002G309600 Sobic001G214300 Sobic001G214300 Sobic002G006900--Sobic001G214300 Sobic002G006900--Sobic001G512700 Sobic001G486300--Sobic005G023900 Sobic001G486300--Sobic001G420200 Sobic001G486300--Sobic003G268300 Sobic007G011400 Sobic007G011400 Sobic001G486300--Sobic007G011400 Sobic001G486300--Sobic001G497300 Sobic004G290800 Sobic004G290800 Sobic001G486300--Sobic004G290800 Sobic001G107500 Sobic001G107500 Sobic001G486300--Sobic001G107500 Sobic001G486300--Sobic001G251700 Sobic003G220200 Sobic003G220200 Sobic001G486300--Sobic003G220200 Sobic003G268300--Sobic007G096600 Sobic003G268300--Sobic002G157000 Sobic003G268300--Sobic001G420200 Sobic003G268300--Sobic003G200200 Sobic003G268300--Sobic002G248400 Sobic009G127900 Sobic009G127900 Sobic003G268300--Sobic009G127900 Sobic007G178700 Sobic007G178700 Sobic003G268300--Sobic007G178700 Sobic007G037900 Sobic007G037900 Sobic003G268300--Sobic007G037900 Sobic003G268300--Sobic008G173900 Sobic007G065400--Sobic002G006900 Sobic002G191800 Sobic002G191800 Sobic007G065400--Sobic002G191800 Sobic008G009700 Sobic008G009700 Sobic007G065400--Sobic008G009700 Sobic007G065400--Sobic009G040600 Sobic007G065400--Sobic004G145500 Sobic007G065400--Sobic009G210500 Sobic003G119000 Sobic003G119000 Sobic007G065400--Sobic003G119000 Sobic007G065400--Sobic003G372700 Sobic008G028700 Sobic008G028700 Sobic007G065400--Sobic008G028700 Sobic009G210500--Sobic002G320500 Sobic009G210500--Sobic007G065400 Sobic009G210500--Sobic002G157000 Sobic006G032400 Sobic006G032400 Sobic009G210500--Sobic006G032400 Sobic009G210500--Sobic003G268300 Sobic001G407200 Sobic001G407200 Sobic009G210500--Sobic001G407200 Sobic007G167500 Sobic007G167500 Sobic009G210500--Sobic007G167500 Sobic001G090400 Sobic001G090400 Sobic009G210500--Sobic001G090400 Sobic009G210500--Sobic004G145500
Octagon: transcription factors


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