Gene annotation
Transcriptome id Sobic.007G145200.2,Sobic.007G145200.1
Synonym
Functional annotation serine esterase family protein, putative, expressed
UniProt A0A1Z5RAG7 , A0A1B6PI42
Pfam PF05057
Panther DB PTHR12482 PTHR12482:SF17
NCBI CDD KOG4372; Predicted alpha/beta hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G25770 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os08g34750.1 : serine esterase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a022398 , Zm00025a005820
Brachypodium KQJ98503
Barley HORVU7Hr1G060790.10 , HORVU7Hr1G060790.19 , HORVU7Hr1G060790.30 , HORVU7Hr1G060790.17 , HORVU7Hr1G060790.16 , HORVU7Hr1G060790.15 , HORVU7Hr1G060790.14 , HORVU7Hr1G060790.13 , HORVU7Hr1G060790.12 , HORVU7Hr1G060790.11 , HORVU7Hr1G060790.18 , HORVU7Hr1G060790.9 , HORVU7Hr1G060790.8 , HORVU7Hr1G060790.7 , HORVU7Hr1G060790.6 , HORVU7Hr1G060790.5 , HORVU7Hr1G060790.4 , HORVU7Hr1G060790.3 , HORVU7Hr1G060790.2 , HORVU7Hr1G060790.1 , HORVU7Hr1G060790.31 , HORVU7Hr1G060790.28 , HORVU7Hr1G060790.29 , HORVU7Hr1G060790.26 , HORVU7Hr1G060790.27 , HORVU7Hr1G060790.24 , HORVU7Hr1G060790.25 , HORVU7Hr1G060790.22 , HORVU7Hr1G060790.23 , HORVU7Hr1G060790.20 , HORVU7Hr1G060790.21 , HORVU7Hr1G060790.32
Wheat TraesCS7D02G281400 , TraesCS7D02G281400 , TraesCS7D02G281400 , TraesCS7B02G177600 , TraesCS7B02G177600 , TraesCS7B02G177600 , TraesCS7B02G177600 , TraesCS7B02G177600 , TraesCS7A02G282700 , TraesCS7A02G282700 , TraesCS7A02G282700 , TraesCS7A02G282700
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.007G145200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G220200 protein kinase family protein, putative, expressed K17541: SCY1-like protein 2
2 Sobic.010G026400 BUD13, putative, expressed K13106: BUD13, pre-mRNA-splicing factor CWC26
3 Sobic.006G082600 OsFBX133 - F-box domain containing protein, expressed K10295: F-box protein 9
4 Sobic.001G451000 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
5 Sobic.009G127900 - -
6 Sobic.001G446900 arginyl-tRNA synthetase, putative, expressed -
7 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
8 Sobic.004G290800 GRAS family transcription factor(PubMedID : 23915383)@scarecrow, putative, expressed -
9 Sobic.001G486300 phosphatidylinositol transfer, putative, expressed -
10 Sobic.003G012500 expressed protein -
11 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
12 Sobic.007G137900 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
13 Sobic.001G271900 - -
14 Sobic.003G261300 arginine/serine-rich coiled-coil protein 1, putative, expressed -
15 Sobic.001G251700 OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
16 Sobic.007G178700 - -
17 Sobic.010G074500 -(PubMedID : 26320239)@phosphopantothenoylcysteine decarboxylase, putative, expressed K01598: PPCDC, phosphopantothenoylcysteine decarboxylase
18 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
19 Sobic.010G260500 pre-mRNA-splicing factor syf2, putative, expressed K12868: pre-mRNA-splicing factor SYF2
20 Sobic.002G166700 cyclin, putative, expressed -


Gene co-expression network
sample Sobic007G145200 Sobic007G145200 Sobic003G220200 Sobic003G220200 Sobic007G145200--Sobic003G220200 Sobic010G026400 Sobic010G026400 Sobic007G145200--Sobic010G026400 Sobic006G082600 Sobic006G082600 Sobic007G145200--Sobic006G082600 Sobic001G451000 Sobic001G451000 Sobic007G145200--Sobic001G451000 Sobic009G127900 Sobic009G127900 Sobic007G145200--Sobic009G127900 Sobic001G446900 Sobic001G446900 Sobic007G145200--Sobic001G446900 Sobic002G157300 Sobic002G157300 Sobic007G145200--Sobic002G157300 Sobic004G290800 Sobic004G290800 Sobic007G145200--Sobic004G290800 Sobic001G486300 Sobic001G486300 Sobic007G145200--Sobic001G486300 Sobic003G220200--Sobic007G145200 Sobic003G220200--Sobic002G157300 Sobic002G157000 Sobic002G157000 Sobic003G220200--Sobic002G157000 Sobic002G320500 Sobic002G320500 Sobic003G220200--Sobic002G320500 Sobic007G137900 Sobic007G137900 Sobic003G220200--Sobic007G137900 Sobic001G251700 Sobic001G251700 Sobic003G220200--Sobic001G251700 Sobic007G011400 Sobic007G011400 Sobic003G220200--Sobic007G011400 Sobic004G349900 Sobic004G349900 Sobic003G220200--Sobic004G349900 Sobic001G107500 Sobic001G107500 Sobic003G220200--Sobic001G107500 Sobic003G012500 Sobic003G012500 Sobic010G026400--Sobic003G012500 Sobic010G026400--Sobic002G157300 Sobic010G026400--Sobic009G127900 Sobic006G009400 Sobic006G009400 Sobic010G026400--Sobic006G009400 Sobic010G026400--Sobic007G011400 Sobic003G261300 Sobic003G261300 Sobic010G026400--Sobic003G261300 Sobic010G263800 Sobic010G263800 Sobic010G026400--Sobic010G263800 Sobic005G149500 Sobic005G149500 Sobic010G026400--Sobic005G149500 Sobic003G187400 Sobic003G187400 Sobic010G026400--Sobic003G187400 Sobic001G162300 Sobic001G162300 Sobic006G082600--Sobic001G162300 Sobic007G178700 Sobic007G178700 Sobic006G082600--Sobic007G178700 Sobic007G037100 Sobic007G037100 Sobic006G082600--Sobic007G037100 Sobic006G082600--Sobic001G251700 Sobic004G196700 Sobic004G196700 Sobic006G082600--Sobic004G196700 Sobic009G134500 Sobic009G134500 Sobic006G082600--Sobic009G134500 Sobic010G124001 Sobic010G124001 Sobic006G082600--Sobic010G124001 Sobic006G082600--Sobic009G127900 Sobic006G082600--Sobic002G157000 Sobic005G167300 Sobic005G167300 Sobic001G451000--Sobic005G167300 Sobic002G115801 Sobic002G115801 Sobic001G451000--Sobic002G115801 Sobic010G260500 Sobic010G260500 Sobic001G451000--Sobic010G260500 Sobic002G284200 Sobic002G284200 Sobic001G451000--Sobic002G284200 Sobic003G333600 Sobic003G333600 Sobic001G451000--Sobic003G333600 Sobic007G078000 Sobic007G078000 Sobic001G451000--Sobic007G078000 Sobic001G439500 Sobic001G439500 Sobic001G451000--Sobic001G439500 Sobic004G198000 Sobic004G198000 Sobic001G451000--Sobic004G198000 Sobic001G451000--Sobic004G196700 Sobic009G127900--Sobic007G178700 Sobic003G268300 Sobic003G268300 Sobic009G127900--Sobic003G268300 Sobic009G127900--Sobic001G446900 Sobic006G066650 Sobic006G066650 Sobic009G127900--Sobic006G066650 Sobic009G127900--Sobic004G290800 Sobic009G127900--Sobic010G026400 Sobic007G037900 Sobic007G037900 Sobic009G127900--Sobic007G037900 Sobic008G173900 Sobic008G173900 Sobic009G127900--Sobic008G173900 Sobic001G111900 Sobic001G111900 Sobic009G127900--Sobic001G111900 Sobic001G446900--Sobic007G178700 Sobic001G446900--Sobic009G127900 Sobic001G446900--Sobic006G082600 Sobic001G446900--Sobic004G290800 Sobic001G446900--Sobic003G268300 Sobic001G446900--Sobic007G137900 Sobic001G446900--Sobic010G026400 Sobic009G104201 Sobic009G104201 Sobic001G446900--Sobic009G104201 Sobic001G446900--Sobic001G111900 Sobic002G157300--Sobic010G026400 Sobic002G157300--Sobic003G187400 Sobic002G157300--Sobic007G011400 Sobic002G157300--Sobic005G149500 Sobic001G094000 Sobic001G094000 Sobic002G157300--Sobic001G094000 Sobic002G157300--Sobic010G260500 Sobic007G185900 Sobic007G185900 Sobic002G157300--Sobic007G185900 Sobic002G157300--Sobic010G263800 Sobic006G173100 Sobic006G173100 Sobic002G157300--Sobic006G173100 Sobic004G290800--Sobic009G127900 Sobic001G420200 Sobic001G420200 Sobic004G290800--Sobic001G420200 Sobic004G290800--Sobic007G178700 Sobic004G290800--Sobic007G037900 Sobic004G290800--Sobic003G268300 Sobic004G290800--Sobic001G162300 Sobic004G290800--Sobic002G157000 Sobic004G290800--Sobic001G111900 Sobic004G290800--Sobic001G446900 Sobic005G023900 Sobic005G023900 Sobic001G486300--Sobic005G023900 Sobic001G486300--Sobic001G420200 Sobic001G486300--Sobic003G268300 Sobic001G486300--Sobic007G011400 Sobic001G497300 Sobic001G497300 Sobic001G486300--Sobic001G497300 Sobic001G486300--Sobic004G290800 Sobic001G486300--Sobic001G107500 Sobic001G486300--Sobic001G251700 Sobic001G486300--Sobic003G220200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.